RNA–Protein interactions for RNA: ENST00000502875.1

TNRC18P1-201, Transcript of trinucleotide repeat containing 18 pseudogene 1, humanhuman

BASIC

Gene TNRC18P1, Length 3,650 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18P1-201ENST00000502875 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.78
TNRC18P1-201ENST00000502875 DCAF8L2P0C7V8 631 aa23.85■■□□□ 1.41
TNRC18P1-201ENST00000502875 SHROOM4Q9ULL8 1493 aa23.75■■□□□ 1.39
TNRC18P1-201ENST00000502875 SUPT5HO00267 1087 aaKnown RBP23.61■■□□□ 1.37
TNRC18P1-201ENST00000502875 EHMT2Q96KQ7 1210 aa22.24■■□□□ 1.15
TNRC18P1-201ENST00000502875 PCGF6Q9BYE7 350 aa22.24■■□□□ 1.15
TNRC18P1-201ENST00000502875 CHIC1Q5VXU3 224 aa22.2■■□□□ 1.14
TNRC18P1-201ENST00000502875 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
TNRC18P1-201ENST00000502875 LOC105371045A0A1W2PR82 267 aa21.95■■□□□ 1.1
TNRC18P1-201ENST00000502875 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
TNRC18P1-201ENST00000502875 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
TNRC18P1-201ENST00000502875 HRCP23327 699 aa21.7■■□□□ 1.07
TNRC18P1-201ENST00000502875 PPARGC1BQ86YN6 1023 aaKnown RBP21.57■■□□□ 1.04
TNRC18P1-201ENST00000502875 CCDC180Q9P1Z9 1646 aa21.56■■□□□ 1.04
TNRC18P1-201ENST00000502875 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
TNRC18P1-201ENST00000502875 TTBK1Q5TCY1 1321 aaPredicted RBP21.47■■□□□ 1.03
TNRC18P1-201ENST00000502875 TRIM26Q12899 539 aaPredicted RBP21.39■■□□□ 1.02
TNRC18P1-201ENST00000502875 ABCC9O60706 1549 aa21.33■■□□□ 1
TNRC18P1-201ENST00000502875 SCRIBQ14160 1630 aa21.13■□□□□ 0.97
TNRC18P1-201ENST00000502875 ZEB1P37275 1124 aaPredicted RBP21.07■□□□□ 0.96
TNRC18P1-201ENST00000502875 RANGAP1P46060 587 aaPredicted RBP21.05■□□□□ 0.96
TNRC18P1-201ENST00000502875 CCER1Q8TC90 406 aaPredicted RBP21.05■□□□□ 0.96
TNRC18P1-201ENST00000502875 UBTFP17480 764 aaKnown RBP21.02■□□□□ 0.96
TNRC18P1-201ENST00000502875 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
TNRC18P1-201ENST00000502875 DCAF1Q9Y4B6 1507 aa20.91■□□□□ 0.94
TNRC18P1-201ENST00000502875 PABPN1Q86U42 306 aaKnown RBP eCLIP20.9■□□□□ 0.94
TNRC18P1-201ENST00000502875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.86■□□□□ 0.93
TNRC18P1-201ENST00000502875 APLP2Q06481 763 aa20.81■□□□□ 0.92
TNRC18P1-201ENST00000502875 CECR2Q9BXF3 1484 aa20.68■□□□□ 0.9
TNRC18P1-201ENST00000502875 HNRNPUL2Q1KMD3 747 aaKnown RBP20.58■□□□□ 0.89
TNRC18P1-201ENST00000502875 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
TNRC18P1-201ENST00000502875 CSRNP3Q8WYN3 585 aa20.46■□□□□ 0.87
TNRC18P1-201ENST00000502875 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
TNRC18P1-201ENST00000502875 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
TNRC18P1-201ENST00000502875 NACADO15069 1562 aa20.41■□□□□ 0.86
TNRC18P1-201ENST00000502875 CENPBP07199 599 aaPredicted RBP20.4■□□□□ 0.86
TNRC18P1-201ENST00000502875 DIEXFQ68CQ4 756 aaKnown RBP20.37■□□□□ 0.85
TNRC18P1-201ENST00000502875 ATP1B4Q9UN42 357 aaPredicted RBP20.33■□□□□ 0.84
TNRC18P1-201ENST00000502875 ITGAEP38570 1179 aa20.29■□□□□ 0.84
TNRC18P1-201ENST00000502875 WIZO95785 1651 aa20.23■□□□□ 0.83
TNRC18P1-201ENST00000502875 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.81
TNRC18P1-201ENST00000502875 SOGA1O94964 1423 aa20.13■□□□□ 0.81
TNRC18P1-201ENST00000502875 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
TNRC18P1-201ENST00000502875 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
TNRC18P1-201ENST00000502875 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
TNRC18P1-201ENST00000502875 SCAF1Q9H7N4 1312 aaKnown RBP20.05■□□□□ 0.8
TNRC18P1-201ENST00000502875 ZNF316A6NFI3 1004 aaPredicted RBP20.04■□□□□ 0.8
TNRC18P1-201ENST00000502875 GTF3C3Q9Y5Q9 886 aa20.04■□□□□ 0.8
TNRC18P1-201ENST00000502875 ACIN1Q9UKV3 1341 aaKnown RBP20■□□□□ 0.79
TNRC18P1-201ENST00000502875 NEUROD1Q13562 356 aa19.98■□□□□ 0.79
TNRC18P1-201ENST00000502875 PELP1Q8IZL8 1130 aaKnown RBP19.98■□□□□ 0.79
TNRC18P1-201ENST00000502875 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
TNRC18P1-201ENST00000502875 TNIKQ9UKE5 1360 aa19.97■□□□□ 0.79
TNRC18P1-201ENST00000502875 CLIP1P30622 1438 aa19.9■□□□□ 0.78
TNRC18P1-201ENST00000502875 RUSC2Q8N2Y8 1516 aa19.89■□□□□ 0.77
TNRC18P1-201ENST00000502875 GOLGA3Q08378 1498 aa19.87■□□□□ 0.77
TNRC18P1-201ENST00000502875 P3H3Q8IVL6 736 aa19.86■□□□□ 0.77
TNRC18P1-201ENST00000502875 EEA1Q15075 1411 aa19.85■□□□□ 0.77
TNRC18P1-201ENST00000502875 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.76
TNRC18P1-201ENST00000502875 FAM50AQ14320 339 aaKnown RBP19.82■□□□□ 0.76
TNRC18P1-201ENST00000502875 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
TNRC18P1-201ENST00000502875 MIER1Q8N108 512 aa19.76■□□□□ 0.75
TNRC18P1-201ENST00000502875 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
TNRC18P1-201ENST00000502875 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
TNRC18P1-201ENST00000502875 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
TNRC18P1-201ENST00000502875 KANK4Q5T7N3 995 aaPredicted RBP19.57■□□□□ 0.72
TNRC18P1-201ENST00000502875 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
TNRC18P1-201ENST00000502875 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
TNRC18P1-201ENST00000502875 VPS8Q8N3P4 1428 aa19.53■□□□□ 0.72
TNRC18P1-201ENST00000502875 ARID3CA6NKF2 412 aa19.48■□□□□ 0.71
TNRC18P1-201ENST00000502875 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
TNRC18P1-201ENST00000502875 HIRIP3Q9BW71 556 aaPredicted RBP19.44■□□□□ 0.7
TNRC18P1-201ENST00000502875 BCANQ96GW7 911 aa19.43■□□□□ 0.7
TNRC18P1-201ENST00000502875 NEFLP07196 543 aa19.42■□□□□ 0.7
TNRC18P1-201ENST00000502875 CNGB1Q14028 1251 aaPredicted RBP19.42■□□□□ 0.7
TNRC18P1-201ENST00000502875 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
TNRC18P1-201ENST00000502875 TRIM52Q96A61 297 aa19.38■□□□□ 0.69
TNRC18P1-201ENST00000502875 SIN3AQ96ST3 1273 aa19.33■□□□□ 0.68
TNRC18P1-201ENST00000502875 SYNJ1O43426 1573 aa19.33■□□□□ 0.68
TNRC18P1-201ENST00000502875 POLR3GLQ9BT43 218 aa19.31■□□□□ 0.68
TNRC18P1-201ENST00000502875 CUX2O14529 1486 aa19.31■□□□□ 0.68
TNRC18P1-201ENST00000502875 CCNB3Q8WWL7 1395 aa19.29■□□□□ 0.68
TNRC18P1-201ENST00000502875 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
TNRC18P1-201ENST00000502875 CHIC2Q9UKJ5 165 aa19.26■□□□□ 0.67
TNRC18P1-201ENST00000502875 ANP32CO43423 234 aa19.25■□□□□ 0.67
TNRC18P1-201ENST00000502875 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
TNRC18P1-201ENST00000502875 CLSPNQ9HAW4 1339 aa19.19■□□□□ 0.66
TNRC18P1-201ENST00000502875 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
TNRC18P1-201ENST00000502875 KIF21BO75037 1637 aa19.18■□□□□ 0.66
TNRC18P1-201ENST00000502875 DHX57Q6P158 1386 aaKnown RBP19.18■□□□□ 0.66
TNRC18P1-201ENST00000502875 MTUS2Q5JR59 1369 aa19.16■□□□□ 0.66
TNRC18P1-201ENST00000502875 TONSLQ96HA7 1378 aa19.15■□□□□ 0.66
TNRC18P1-201ENST00000502875 FBLN2P98095 1184 aa19.15■□□□□ 0.66
TNRC18P1-201ENST00000502875 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
TNRC18P1-201ENST00000502875 RRP7BPQ9NSQ0 103 aa19.13■□□□□ 0.65
TNRC18P1-201ENST00000502875 FKBP8Q14318 412 aa19.13■□□□□ 0.65
TNRC18P1-201ENST00000502875 RAB3GAP2Q9H2M9 1393 aa19.12■□□□□ 0.65
TNRC18P1-201ENST00000502875 ZNF326Q5BKZ1 582 aaKnown RBP19.11■□□□□ 0.65
TNRC18P1-201ENST00000502875 CADPSQ9ULU8 1353 aa19.08■□□□□ 0.65
TNRC18P1-201ENST00000502875 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms