RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
SFTPA1-202ENST00000419470 CCDC180Q9P1Z9 1646 aa26.09■■□□□ 1.77
SFTPA1-202ENST00000419470 ZCCHC6Q5VYS8 1495 aaKnown RBP25■■□□□ 1.59
SFTPA1-202ENST00000419470 ABCC9O60706 1549 aa24.74■■□□□ 1.55
SFTPA1-202ENST00000419470 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
SFTPA1-202ENST00000419470 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
SFTPA1-202ENST00000419470 MYO15BQ96JP2 1530 aa24.43■■□□□ 1.5
SFTPA1-202ENST00000419470 NACADO15069 1562 aa24.31■■□□□ 1.48
SFTPA1-202ENST00000419470 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
SFTPA1-202ENST00000419470 RB1CC1Q8TDY2 1594 aa24.13■■□□□ 1.45
SFTPA1-202ENST00000419470 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
SFTPA1-202ENST00000419470 UNC13AQ9UPW8 1703 aa23.7■■□□□ 1.38
SFTPA1-202ENST00000419470 BICRAQ9NZM4 1560 aa23.42■■□□□ 1.34
SFTPA1-202ENST00000419470 PABPN1Q86U42 306 aaKnown RBP eCLIP23.27■■□□□ 1.32
SFTPA1-202ENST00000419470 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
SFTPA1-202ENST00000419470 SUPT5HO00267 1087 aaKnown RBP23.13■■□□□ 1.29
SFTPA1-202ENST00000419470 RSF1Q96T23 1441 aaPredicted RBP23.04■■□□□ 1.28
SFTPA1-202ENST00000419470 BAZ1AQ9NRL2 1556 aaPredicted RBP23.02■■□□□ 1.28
SFTPA1-202ENST00000419470 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
SFTPA1-202ENST00000419470 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
SFTPA1-202ENST00000419470 WIZO95785 1651 aa22.82■■□□□ 1.24
SFTPA1-202ENST00000419470 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
SFTPA1-202ENST00000419470 PEG3Q9GZU2 1588 aa22.69■■□□□ 1.22
SFTPA1-202ENST00000419470 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
SFTPA1-202ENST00000419470 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.21
SFTPA1-202ENST00000419470 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
SFTPA1-202ENST00000419470 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
SFTPA1-202ENST00000419470 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
SFTPA1-202ENST00000419470 CC2D2AQ9P2K1 1620 aa22.42■■□□□ 1.18
SFTPA1-202ENST00000419470 HMGXB3Q12766 1538 aa22.4■■□□□ 1.18
SFTPA1-202ENST00000419470 CCDC88BA6NC98 1476 aa22.33■■□□□ 1.17
SFTPA1-202ENST00000419470 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
SFTPA1-202ENST00000419470 HRCP23327 699 aa21.96■■□□□ 1.11
SFTPA1-202ENST00000419470 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
SFTPA1-202ENST00000419470 CFTRP13569 1480 aa21.89■■□□□ 1.09
SFTPA1-202ENST00000419470 PRDM2Q13029 1718 aa21.83■■□□□ 1.09
SFTPA1-202ENST00000419470 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
SFTPA1-202ENST00000419470 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
SFTPA1-202ENST00000419470 TRIM41Q8WV44 630 aa21.78■■□□□ 1.08
SFTPA1-202ENST00000419470 LAMC3Q9Y6N6 1575 aa21.7■■□□□ 1.06
SFTPA1-202ENST00000419470 NESP48681 1621 aa21.68■■□□□ 1.06
SFTPA1-202ENST00000419470 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
SFTPA1-202ENST00000419470 PELP1Q8IZL8 1130 aaKnown RBP21.64■■□□□ 1.05
SFTPA1-202ENST00000419470 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
SFTPA1-202ENST00000419470 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
SFTPA1-202ENST00000419470 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
SFTPA1-202ENST00000419470 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
SFTPA1-202ENST00000419470 CUX1P39880 1505 aa21.53■■□□□ 1.04
SFTPA1-202ENST00000419470 PDS5BQ9NTI5 1447 aa21.5■■□□□ 1.03
SFTPA1-202ENST00000419470 CEP164Q9UPV0 1460 aa21.46■■□□□ 1.03
SFTPA1-202ENST00000419470 KIF21AQ7Z4S6 1674 aa21.46■■□□□ 1.03
SFTPA1-202ENST00000419470 DNMBPQ6XZF7 1577 aa21.38■■□□□ 1.01
SFTPA1-202ENST00000419470 SOGA1O94964 1423 aa21.36■■□□□ 1.01
SFTPA1-202ENST00000419470 TOPBP1Q92547 1522 aa21.35■■□□□ 1.01
SFTPA1-202ENST00000419470 FAM9AQ8IZU1 332 aaPredicted RBP21.35■■□□□ 1.01
SFTPA1-202ENST00000419470 URB2Q14146 1524 aaKnown RBP21.33■■□□□ 1.01
SFTPA1-202ENST00000419470 FGD5Q6ZNL6 1462 aa21.3■■□□□ 1
SFTPA1-202ENST00000419470 EEA1Q15075 1411 aa21.3■■□□□ 1
SFTPA1-202ENST00000419470 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
SFTPA1-202ENST00000419470 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
SFTPA1-202ENST00000419470 PCGF6Q9BYE7 350 aa21.27■■□□□ 1
SFTPA1-202ENST00000419470 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
SFTPA1-202ENST00000419470 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
SFTPA1-202ENST00000419470 LOC105371045A0A1W2PR82 267 aa21.23■□□□□ 0.99
SFTPA1-202ENST00000419470 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
SFTPA1-202ENST00000419470 CSRNP3Q8WYN3 585 aa21.17■□□□□ 0.98
SFTPA1-202ENST00000419470 WDR62O43379 1518 aa21.16■□□□□ 0.98
SFTPA1-202ENST00000419470 KIF27Q86VH2 1401 aa21.14■□□□□ 0.98
SFTPA1-202ENST00000419470 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.98
SFTPA1-202ENST00000419470 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.97
SFTPA1-202ENST00000419470 ABCA10Q8WWZ4 1543 aa21.12■□□□□ 0.97
SFTPA1-202ENST00000419470 CUX2O14529 1486 aa21.12■□□□□ 0.97
SFTPA1-202ENST00000419470 WDR97A6NE52 1622 aa21.1■□□□□ 0.97
SFTPA1-202ENST00000419470 TARBP1Q13395 1621 aaKnown RBP21.06■□□□□ 0.96
SFTPA1-202ENST00000419470 KIF21BO75037 1637 aa21.06■□□□□ 0.96
SFTPA1-202ENST00000419470 EHMT2Q96KQ7 1210 aa21.02■□□□□ 0.96
SFTPA1-202ENST00000419470 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
SFTPA1-202ENST00000419470 PRXQ9BXM0 1461 aa20.99■□□□□ 0.95
SFTPA1-202ENST00000419470 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
SFTPA1-202ENST00000419470 IGF1RP08069 1367 aa20.98■□□□□ 0.95
SFTPA1-202ENST00000419470 IFT140Q96RY7 1462 aa20.96■□□□□ 0.95
SFTPA1-202ENST00000419470 ERICH3Q5RHP9 1530 aa20.94■□□□□ 0.94
SFTPA1-202ENST00000419470 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
SFTPA1-202ENST00000419470 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
SFTPA1-202ENST00000419470 MYT1Q01538 1121 aa20.93■□□□□ 0.94
SFTPA1-202ENST00000419470 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
SFTPA1-202ENST00000419470 TNIKQ9UKE5 1360 aa20.89■□□□□ 0.94
SFTPA1-202ENST00000419470 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
SFTPA1-202ENST00000419470 CUL7Q14999 1698 aa20.86■□□□□ 0.93
SFTPA1-202ENST00000419470 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
SFTPA1-202ENST00000419470 ZNF608Q9ULD9 1512 aaPredicted RBP20.86■□□□□ 0.93
SFTPA1-202ENST00000419470 PBRM1Q86U86 1689 aa20.85■□□□□ 0.93
SFTPA1-202ENST00000419470 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.93
SFTPA1-202ENST00000419470 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
SFTPA1-202ENST00000419470 SCAF1Q9H7N4 1312 aaKnown RBP20.8■□□□□ 0.92
SFTPA1-202ENST00000419470 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
SFTPA1-202ENST00000419470 CEP162Q5TB80 1403 aa20.77■□□□□ 0.92
SFTPA1-202ENST00000419470 ADAMTS12P58397 1594 aa20.71■□□□□ 0.91
SFTPA1-202ENST00000419470 ZEB1P37275 1124 aaPredicted RBP20.7■□□□□ 0.9
SFTPA1-202ENST00000419470 TRIM26Q12899 539 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms