RNA–Protein interactions for RNA: ENST00000371237.8

C8B-201, Transcript of complement C8 beta chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C8B, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C8B-201ENST00000371237 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
C8B-201ENST00000371237 CCDC180Q9P1Z9 1646 aa23.27■■□□□ 1.32
C8B-201ENST00000371237 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
C8B-201ENST00000371237 ZCCHC6Q5VYS8 1495 aaKnown RBP22.67■■□□□ 1.22
C8B-201ENST00000371237 HRCP23327 699 aa22.64■■□□□ 1.22
C8B-201ENST00000371237 SUPT5HO00267 1087 aaKnown RBP22.54■■□□□ 1.2
C8B-201ENST00000371237 ABCC9O60706 1549 aa22.46■■□□□ 1.19
C8B-201ENST00000371237 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
C8B-201ENST00000371237 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
C8B-201ENST00000371237 DCAF1Q9Y4B6 1507 aa22.2■■□□□ 1.15
C8B-201ENST00000371237 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.13
C8B-201ENST00000371237 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
C8B-201ENST00000371237 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
C8B-201ENST00000371237 NACADO15069 1562 aa21.76■■□□□ 1.07
C8B-201ENST00000371237 TRIM26Q12899 539 aaPredicted RBP21.72■■□□□ 1.07
C8B-201ENST00000371237 PELP1Q8IZL8 1130 aaKnown RBP21.68■■□□□ 1.06
C8B-201ENST00000371237 RB1CC1Q8TDY2 1594 aa21.68■■□□□ 1.06
C8B-201ENST00000371237 ZEB1P37275 1124 aaPredicted RBP21.63■■□□□ 1.05
C8B-201ENST00000371237 LOC105371045A0A1W2PR82 267 aa21.51■■□□□ 1.03
C8B-201ENST00000371237 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
C8B-201ENST00000371237 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
C8B-201ENST00000371237 RSF1Q96T23 1441 aaPredicted RBP21.2■□□□□ 0.98
C8B-201ENST00000371237 PABPN1Q86U42 306 aaKnown RBP eCLIP21.12■□□□□ 0.97
C8B-201ENST00000371237 BICRAQ9NZM4 1560 aa21.12■□□□□ 0.97
C8B-201ENST00000371237 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
C8B-201ENST00000371237 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
C8B-201ENST00000371237 MYT1Q01538 1121 aa20.87■□□□□ 0.93
C8B-201ENST00000371237 ACIN1Q9UKV3 1341 aaKnown RBP20.81■□□□□ 0.92
C8B-201ENST00000371237 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
C8B-201ENST00000371237 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
C8B-201ENST00000371237 CENPBP07199 599 aaPredicted RBP20.68■□□□□ 0.9
C8B-201ENST00000371237 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
C8B-201ENST00000371237 WRNQ14191 1432 aaPredicted RBP eCLIP20.66■□□□□ 0.9
C8B-201ENST00000371237 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
C8B-201ENST00000371237 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
C8B-201ENST00000371237 CCER1Q8TC90 406 aaPredicted RBP20.62■□□□□ 0.89
C8B-201ENST00000371237 NEUROD1Q13562 356 aa20.61■□□□□ 0.89
C8B-201ENST00000371237 DIEXFQ68CQ4 756 aaKnown RBP20.56■□□□□ 0.88
C8B-201ENST00000371237 WIZO95785 1651 aa20.54■□□□□ 0.88
C8B-201ENST00000371237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.54■□□□□ 0.88
C8B-201ENST00000371237 SMARCA4P51532 1647 aa20.5■□□□□ 0.87
C8B-201ENST00000371237 GTF3C3Q9Y5Q9 886 aa20.48■□□□□ 0.87
C8B-201ENST00000371237 EEA1Q15075 1411 aa20.4■□□□□ 0.86
C8B-201ENST00000371237 EHMT2Q96KQ7 1210 aa20.4■□□□□ 0.86
C8B-201ENST00000371237 CEP162Q5TB80 1403 aa20.39■□□□□ 0.85
C8B-201ENST00000371237 TNIKQ9UKE5 1360 aa20.38■□□□□ 0.85
C8B-201ENST00000371237 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
C8B-201ENST00000371237 ZNF316A6NFI3 1004 aaPredicted RBP20.32■□□□□ 0.84
C8B-201ENST00000371237 CC2D2AQ9P2K1 1620 aa20.29■□□□□ 0.84
C8B-201ENST00000371237 CCDC88BA6NC98 1476 aa20.26■□□□□ 0.83
C8B-201ENST00000371237 ATAD2BQ9ULI0 1458 aa20.26■□□□□ 0.83
C8B-201ENST00000371237 PEG3Q9GZU2 1588 aa20.24■□□□□ 0.83
C8B-201ENST00000371237 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
C8B-201ENST00000371237 ABCC8Q09428 1581 aa20.22■□□□□ 0.83
C8B-201ENST00000371237 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.83
C8B-201ENST00000371237 GOLGA3Q08378 1498 aa20.19■□□□□ 0.82
C8B-201ENST00000371237 SOGA1O94964 1423 aa20.12■□□□□ 0.81
C8B-201ENST00000371237 NCAPD3P42695 1498 aa20.12■□□□□ 0.81
C8B-201ENST00000371237 BAZ1BQ9UIG0 1483 aaKnown RBP20.11■□□□□ 0.81
C8B-201ENST00000371237 CSRNP3Q8WYN3 585 aa20.1■□□□□ 0.81
C8B-201ENST00000371237 CLSPNQ9HAW4 1339 aa20.09■□□□□ 0.81
C8B-201ENST00000371237 KIF21BO75037 1637 aa20.07■□□□□ 0.8
C8B-201ENST00000371237 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
C8B-201ENST00000371237 CEP164Q9UPV0 1460 aa20.02■□□□□ 0.8
C8B-201ENST00000371237 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
C8B-201ENST00000371237 MIER1Q8N108 512 aa19.97■□□□□ 0.79
C8B-201ENST00000371237 RUSC2Q8N2Y8 1516 aa19.96■□□□□ 0.79
C8B-201ENST00000371237 TTBK1Q5TCY1 1321 aaPredicted RBP19.95■□□□□ 0.78
C8B-201ENST00000371237 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
C8B-201ENST00000371237 YTHDC1Q96MU7 727 aaKnown RBP19.93■□□□□ 0.78
C8B-201ENST00000371237 CLIP1P30622 1438 aa19.89■□□□□ 0.77
C8B-201ENST00000371237 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
C8B-201ENST00000371237 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
C8B-201ENST00000371237 APLP2Q06481 763 aa19.75■□□□□ 0.75
C8B-201ENST00000371237 DHX57Q6P158 1386 aaKnown RBP19.69■□□□□ 0.74
C8B-201ENST00000371237 ERICH3Q5RHP9 1530 aa19.67■□□□□ 0.74
C8B-201ENST00000371237 SUPT16HQ9Y5B9 1047 aaKnown RBP19.66■□□□□ 0.74
C8B-201ENST00000371237 RAPGEF2Q9Y4G8 1499 aa19.66■□□□□ 0.74
C8B-201ENST00000371237 CUX2O14529 1486 aa19.65■□□□□ 0.74
C8B-201ENST00000371237 NESP48681 1621 aa19.62■□□□□ 0.73
C8B-201ENST00000371237 TOP2BQ02880 1626 aa19.6■□□□□ 0.73
C8B-201ENST00000371237 CFTRP13569 1480 aa19.59■□□□□ 0.73
C8B-201ENST00000371237 RRBP1Q9P2E9 1410 aaKnown RBP19.59■□□□□ 0.73
C8B-201ENST00000371237 CADPSQ9ULU8 1353 aa19.58■□□□□ 0.73
C8B-201ENST00000371237 BIVM-ERCC5R4GMW8 1640 aa19.56■□□□□ 0.72
C8B-201ENST00000371237 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
C8B-201ENST00000371237 PRXQ9BXM0 1461 aa19.52■□□□□ 0.71
C8B-201ENST00000371237 TSHZ2Q9NRE2 1034 aa19.48■□□□□ 0.71
C8B-201ENST00000371237 LAMC3Q9Y6N6 1575 aa19.48■□□□□ 0.71
C8B-201ENST00000371237 ANP32EQ9BTT0 268 aa19.47■□□□□ 0.71
C8B-201ENST00000371237 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
C8B-201ENST00000371237 CCNB3Q8WWL7 1395 aa19.39■□□□□ 0.69
C8B-201ENST00000371237 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
C8B-201ENST00000371237 MAP3K1Q13233 1512 aa19.36■□□□□ 0.69
C8B-201ENST00000371237 KIF21AQ7Z4S6 1674 aa19.34■□□□□ 0.69
C8B-201ENST00000371237 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.68
C8B-201ENST00000371237 KANK4Q5T7N3 995 aaPredicted RBP19.32■□□□□ 0.68
C8B-201ENST00000371237 MAPKBP1O60336 1514 aa19.31■□□□□ 0.68
C8B-201ENST00000371237 KIF27Q86VH2 1401 aa19.28■□□□□ 0.68
C8B-201ENST00000371237 ARHGAP35Q9NRY4 1499 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms