RNA–Protein interactions for RNA: ENST00000544053.5

EMP1-211, Transcript of epithelial membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene EMP1, Length 1,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP1-211ENST00000544053 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
EMP1-211ENST00000544053 ABCC9O60706 1549 aa30.03■■■□□ 2.4
EMP1-211ENST00000544053 CCDC180Q9P1Z9 1646 aa29.92■■■□□ 2.38
EMP1-211ENST00000544053 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
EMP1-211ENST00000544053 DCAF8L2P0C7V8 631 aa28.51■■■□□ 2.15
EMP1-211ENST00000544053 NACADO15069 1562 aa28.37■■■□□ 2.13
EMP1-211ENST00000544053 DNAJC5BQ9UF47 199 aa28.15■■■□□ 2.1
EMP1-211ENST00000544053 PABPN1Q86U42 306 aaKnown RBP eCLIP28.08■■■□□ 2.09
EMP1-211ENST00000544053 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
EMP1-211ENST00000544053 ZCCHC6Q5VYS8 1495 aaKnown RBP27.77■■■□□ 2.04
EMP1-211ENST00000544053 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
EMP1-211ENST00000544053 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
EMP1-211ENST00000544053 DCAF1Q9Y4B6 1507 aa27.66■■■□□ 2.02
EMP1-211ENST00000544053 SCRIBQ14160 1630 aa27.36■■□□□ 1.97
EMP1-211ENST00000544053 SHROOM4Q9ULL8 1493 aa27.33■■□□□ 1.97
EMP1-211ENST00000544053 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
EMP1-211ENST00000544053 CECR2Q9BXF3 1484 aa27.05■■□□□ 1.92
EMP1-211ENST00000544053 EIF4G1Q04637 1599 aaKnown RBP27.02■■□□□ 1.92
EMP1-211ENST00000544053 NCAPD3P42695 1498 aa26.24■■□□□ 1.79
EMP1-211ENST00000544053 ATAD2BQ9ULI0 1458 aa26.16■■□□□ 1.78
EMP1-211ENST00000544053 SMARCA4P51532 1647 aa26.08■■□□□ 1.77
EMP1-211ENST00000544053 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
EMP1-211ENST00000544053 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.75
EMP1-211ENST00000544053 HMGXB3Q12766 1538 aa25.98■■□□□ 1.75
EMP1-211ENST00000544053 ERCC6Q03468 1493 aa25.96■■□□□ 1.75
EMP1-211ENST00000544053 BAZ1BQ9UIG0 1483 aaKnown RBP25.92■■□□□ 1.74
EMP1-211ENST00000544053 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
EMP1-211ENST00000544053 DNAJC5Q9H3Z4 198 aa25.82■■□□□ 1.72
EMP1-211ENST00000544053 CUX2O14529 1486 aa25.82■■□□□ 1.72
EMP1-211ENST00000544053 PEG3Q9GZU2 1588 aa25.81■■□□□ 1.72
EMP1-211ENST00000544053 NESP48681 1621 aa25.79■■□□□ 1.72
EMP1-211ENST00000544053 LAMC3Q9Y6N6 1575 aa25.58■■□□□ 1.68
EMP1-211ENST00000544053 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
EMP1-211ENST00000544053 CADPSQ9ULU8 1353 aa25.5■■□□□ 1.67
EMP1-211ENST00000544053 WIZO95785 1651 aa25.48■■□□□ 1.67
EMP1-211ENST00000544053 THOC2Q8NI27 1593 aaKnown RBP25.4■■□□□ 1.66
EMP1-211ENST00000544053 RSF1Q96T23 1441 aaPredicted RBP25.38■■□□□ 1.65
EMP1-211ENST00000544053 KIF21AQ7Z4S6 1674 aa25.34■■□□□ 1.65
EMP1-211ENST00000544053 MRC2Q9UBG0 1479 aa25.25■■□□□ 1.63
EMP1-211ENST00000544053 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
EMP1-211ENST00000544053 CEP164Q9UPV0 1460 aa25.17■■□□□ 1.62
EMP1-211ENST00000544053 CFTRP13569 1480 aa25.17■■□□□ 1.62
EMP1-211ENST00000544053 FANCD2Q9BXW9 1451 aa25.17■■□□□ 1.62
EMP1-211ENST00000544053 WDR62O43379 1518 aa25.13■■□□□ 1.61
EMP1-211ENST00000544053 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
EMP1-211ENST00000544053 URB2Q14146 1524 aaKnown RBP24.92■■□□□ 1.58
EMP1-211ENST00000544053 OSCARQ8IYS5 282 aa24.79■■□□□ 1.56
EMP1-211ENST00000544053 TRIM41Q8WV44 630 aa24.78■■□□□ 1.56
EMP1-211ENST00000544053 PRDM2Q13029 1718 aa24.71■■□□□ 1.55
EMP1-211ENST00000544053 IFT140Q96RY7 1462 aa24.69■■□□□ 1.54
EMP1-211ENST00000544053 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
EMP1-211ENST00000544053 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
EMP1-211ENST00000544053 ZNF608Q9ULD9 1512 aaPredicted RBP24.63■■□□□ 1.53
EMP1-211ENST00000544053 DNMBPQ6XZF7 1577 aa24.55■■□□□ 1.52
EMP1-211ENST00000544053 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.51
EMP1-211ENST00000544053 SUPT5HO00267 1087 aaKnown RBP24.45■■□□□ 1.51
EMP1-211ENST00000544053 POLA1P09884 1462 aaPredicted RBP24.43■■□□□ 1.5
EMP1-211ENST00000544053 EIF4G3O43432 1585 aaKnown RBP24.41■■□□□ 1.5
EMP1-211ENST00000544053 FBLN2P98095 1184 aa24.4■■□□□ 1.5
EMP1-211ENST00000544053 SOGA1O94964 1423 aa24.39■■□□□ 1.5
EMP1-211ENST00000544053 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
EMP1-211ENST00000544053 RAD54L2Q9Y4B4 1467 aa24.37■■□□□ 1.49
EMP1-211ENST00000544053 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
EMP1-211ENST00000544053 FGD5Q6ZNL6 1462 aa24.29■■□□□ 1.48
EMP1-211ENST00000544053 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
EMP1-211ENST00000544053 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
EMP1-211ENST00000544053 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
EMP1-211ENST00000544053 ARHGEF11O15085 1522 aa24.25■■□□□ 1.47
EMP1-211ENST00000544053 CUX1P39880 1505 aa24.25■■□□□ 1.47
EMP1-211ENST00000544053 CYB5RLQ6IPT4 315 aa24.22■■□□□ 1.47
EMP1-211ENST00000544053 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
EMP1-211ENST00000544053 SNAPC4Q5SXM2 1469 aa24.17■■□□□ 1.46
EMP1-211ENST00000544053 CHD1O14646 1710 aa24.16■■□□□ 1.46
EMP1-211ENST00000544053 GRIN2BQ13224 1484 aa24.14■■□□□ 1.45
EMP1-211ENST00000544053 WDR97A6NE52 1622 aa24.14■■□□□ 1.45
EMP1-211ENST00000544053 MAGI1Q96QZ7 1491 aaPredicted RBP24.09■■□□□ 1.45
EMP1-211ENST00000544053 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
EMP1-211ENST00000544053 SYNJ2O15056 1496 aa24.03■■□□□ 1.44
EMP1-211ENST00000544053 ARAP1Q96P48 1450 aa24.01■■□□□ 1.43
EMP1-211ENST00000544053 ABCA10Q8WWZ4 1543 aa24.01■■□□□ 1.43
EMP1-211ENST00000544053 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
EMP1-211ENST00000544053 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
EMP1-211ENST00000544053 TRHP20396 242 aaPredicted RBP23.96■■□□□ 1.43
EMP1-211ENST00000544053 CLASP1Q7Z460 1538 aa23.95■■□□□ 1.42
EMP1-211ENST00000544053 ABCA5Q8WWZ7 1642 aa23.89■■□□□ 1.41
EMP1-211ENST00000544053 PBRM1Q86U86 1689 aa23.89■■□□□ 1.41
EMP1-211ENST00000544053 TOP2BQ02880 1626 aa23.87■■□□□ 1.41
EMP1-211ENST00000544053 BIVM-ERCC5R4GMW8 1640 aa23.81■■□□□ 1.4
EMP1-211ENST00000544053 GRIN2AQ12879 1464 aa23.79■■□□□ 1.4
EMP1-211ENST00000544053 FHAD1B1AJZ9 1412 aa23.77■■□□□ 1.4
EMP1-211ENST00000544053 ADAMTS12P58397 1594 aa23.72■■□□□ 1.39
EMP1-211ENST00000544053 NUP160Q12769 1436 aa23.7■■□□□ 1.39
EMP1-211ENST00000544053 ERICH3Q5RHP9 1530 aa23.7■■□□□ 1.38
EMP1-211ENST00000544053 CEP170Q5SW79 1584 aa23.66■■□□□ 1.38
EMP1-211ENST00000544053 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
EMP1-211ENST00000544053 JPH4Q96JJ6 628 aa23.59■■□□□ 1.37
EMP1-211ENST00000544053 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
EMP1-211ENST00000544053 KIF27Q86VH2 1401 aa23.51■■□□□ 1.35
EMP1-211ENST00000544053 IGF1RP08069 1367 aa23.5■■□□□ 1.35
EMP1-211ENST00000544053 SHROOM2Q13796 1616 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms