RNA–Protein interactions for RNA: ENST00000483530.6

RAB3IP-207, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-207ENST00000483530 NISCHQ9Y2I1 1504 aa38.9■■■■□ 3.82
RAB3IP-207ENST00000483530 CCDC180Q9P1Z9 1646 aa33.93■■■■□ 3.02
RAB3IP-207ENST00000483530 ZCCHC6Q5VYS8 1495 aaKnown RBP32.62■■■□□ 2.81
RAB3IP-207ENST00000483530 ABCC9O60706 1549 aa32.29■■■□□ 2.76
RAB3IP-207ENST00000483530 DCAF1Q9Y4B6 1507 aa32.18■■■□□ 2.74
RAB3IP-207ENST00000483530 DCAF8L2P0C7V8 631 aa32.16■■■□□ 2.74
RAB3IP-207ENST00000483530 MYO15BQ96JP2 1530 aa31.88■■■□□ 2.69
RAB3IP-207ENST00000483530 NACADO15069 1562 aa31.7■■■□□ 2.66
RAB3IP-207ENST00000483530 SHROOM4Q9ULL8 1493 aa31.54■■■□□ 2.64
RAB3IP-207ENST00000483530 RB1CC1Q8TDY2 1594 aa31.44■■■□□ 2.62
RAB3IP-207ENST00000483530 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
RAB3IP-207ENST00000483530 UNC13AQ9UPW8 1703 aa30.76■■■□□ 2.52
RAB3IP-207ENST00000483530 BICRAQ9NZM4 1560 aa30.55■■■□□ 2.48
RAB3IP-207ENST00000483530 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
RAB3IP-207ENST00000483530 SUPT5HO00267 1087 aaKnown RBP30.28■■■□□ 2.44
RAB3IP-207ENST00000483530 CECR2Q9BXF3 1484 aa30.26■■■□□ 2.43
RAB3IP-207ENST00000483530 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
RAB3IP-207ENST00000483530 MROH2BQ7Z745 1585 aa30.04■■■□□ 2.4
RAB3IP-207ENST00000483530 BAZ1AQ9NRL2 1556 aaPredicted RBP30.01■■■□□ 2.39
RAB3IP-207ENST00000483530 SMARCA4P51532 1647 aa29.89■■■□□ 2.38
RAB3IP-207ENST00000483530 WIZO95785 1651 aa29.74■■■□□ 2.35
RAB3IP-207ENST00000483530 EIF4G1Q04637 1599 aaKnown RBP29.61■■■□□ 2.33
RAB3IP-207ENST00000483530 PEG3Q9GZU2 1588 aa29.59■■■□□ 2.33
RAB3IP-207ENST00000483530 ATAD2BQ9ULI0 1458 aa29.51■■■□□ 2.31
RAB3IP-207ENST00000483530 TOP2AP11388 1531 aaKnown RBP29.43■■■□□ 2.3
RAB3IP-207ENST00000483530 SMARCA2P51531 1590 aa29.43■■■□□ 2.3
RAB3IP-207ENST00000483530 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
RAB3IP-207ENST00000483530 BAZ1BQ9UIG0 1483 aaKnown RBP29.28■■■□□ 2.28
RAB3IP-207ENST00000483530 CC2D2AQ9P2K1 1620 aa29.21■■■□□ 2.27
RAB3IP-207ENST00000483530 HMGXB3Q12766 1538 aa29.19■■■□□ 2.26
RAB3IP-207ENST00000483530 CCDC88BA6NC98 1476 aa29.18■■■□□ 2.26
RAB3IP-207ENST00000483530 CHIC1Q5VXU3 224 aa28.95■■■□□ 2.22
RAB3IP-207ENST00000483530 DNAJC5BQ9UF47 199 aa28.78■■■□□ 2.2
RAB3IP-207ENST00000483530 CFTRP13569 1480 aa28.59■■■□□ 2.17
RAB3IP-207ENST00000483530 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
RAB3IP-207ENST00000483530 TRIM41Q8WV44 630 aa28.5■■■□□ 2.15
RAB3IP-207ENST00000483530 ABCC8Q09428 1581 aa28.45■■■□□ 2.14
RAB3IP-207ENST00000483530 WRNQ14191 1432 aaPredicted RBP eCLIP28.32■■■□□ 2.12
RAB3IP-207ENST00000483530 NESP48681 1621 aa28.31■■■□□ 2.12
RAB3IP-207ENST00000483530 PRDM2Q13029 1718 aa28.29■■■□□ 2.12
RAB3IP-207ENST00000483530 LAMC3Q9Y6N6 1575 aa28.28■■■□□ 2.12
RAB3IP-207ENST00000483530 SYNJ1O43426 1573 aa28.19■■■□□ 2.1
RAB3IP-207ENST00000483530 FANCD2Q9BXW9 1451 aa28.18■■■□□ 2.1
RAB3IP-207ENST00000483530 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
RAB3IP-207ENST00000483530 CUX1P39880 1505 aa28.09■■■□□ 2.09
RAB3IP-207ENST00000483530 PDS5BQ9NTI5 1447 aa28.09■■■□□ 2.09
RAB3IP-207ENST00000483530 BIVM-ERCC5R4GMW8 1640 aa28.05■■■□□ 2.08
RAB3IP-207ENST00000483530 CEP164Q9UPV0 1460 aa27.99■■■□□ 2.07
RAB3IP-207ENST00000483530 FAM9AQ8IZU1 332 aaPredicted RBP27.94■■■□□ 2.06
RAB3IP-207ENST00000483530 SOGA1O94964 1423 aa27.94■■■□□ 2.06
RAB3IP-207ENST00000483530 KIF21AQ7Z4S6 1674 aa27.89■■■□□ 2.06
RAB3IP-207ENST00000483530 DNMBPQ6XZF7 1577 aa27.87■■■□□ 2.05
RAB3IP-207ENST00000483530 TOPBP1Q92547 1522 aa27.85■■■□□ 2.05
RAB3IP-207ENST00000483530 URB2Q14146 1524 aaKnown RBP27.85■■■□□ 2.05
RAB3IP-207ENST00000483530 RUSC2Q8N2Y8 1516 aa27.85■■■□□ 2.05
RAB3IP-207ENST00000483530 LOC105371045A0A1W2PR82 267 aa27.84■■■□□ 2.05
RAB3IP-207ENST00000483530 EEA1Q15075 1411 aa27.81■■■□□ 2.04
RAB3IP-207ENST00000483530 FGD5Q6ZNL6 1462 aa27.79■■■□□ 2.04
RAB3IP-207ENST00000483530 CSRNP3Q8WYN3 585 aa27.73■■■□□ 2.03
RAB3IP-207ENST00000483530 MRC2Q9UBG0 1479 aa27.71■■■□□ 2.03
RAB3IP-207ENST00000483530 POLA1P09884 1462 aaPredicted RBP27.71■■■□□ 2.03
RAB3IP-207ENST00000483530 ERCC6Q03468 1493 aa27.66■■■□□ 2.02
RAB3IP-207ENST00000483530 RAD54L2Q9Y4B4 1467 aa27.62■■■□□ 2.01
RAB3IP-207ENST00000483530 KIF27Q86VH2 1401 aa27.62■■■□□ 2.01
RAB3IP-207ENST00000483530 WDR62O43379 1518 aa27.58■■■□□ 2.01
RAB3IP-207ENST00000483530 CUX2O14529 1486 aa27.57■■■□□ 2
RAB3IP-207ENST00000483530 ABCA10Q8WWZ4 1543 aa27.57■■■□□ 2
RAB3IP-207ENST00000483530 EHMT2Q96KQ7 1210 aa27.52■■■□□ 2
RAB3IP-207ENST00000483530 THOC2Q8NI27 1593 aaKnown RBP27.52■■■□□ 2
RAB3IP-207ENST00000483530 IGF1RP08069 1367 aa27.47■■□□□ 1.99
RAB3IP-207ENST00000483530 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.99
RAB3IP-207ENST00000483530 WDR97A6NE52 1622 aa27.44■■□□□ 1.98
RAB3IP-207ENST00000483530 KIF21BO75037 1637 aa27.43■■□□□ 1.98
RAB3IP-207ENST00000483530 PRXQ9BXM0 1461 aa27.43■■□□□ 1.98
RAB3IP-207ENST00000483530 TDRD9Q8NDG6 1382 aaKnown RBP27.39■■□□□ 1.98
RAB3IP-207ENST00000483530 GOLGA3Q08378 1498 aa27.39■■□□□ 1.97
RAB3IP-207ENST00000483530 IFT140Q96RY7 1462 aa27.36■■□□□ 1.97
RAB3IP-207ENST00000483530 RAPGEF2Q9Y4G8 1499 aa27.35■■□□□ 1.97
RAB3IP-207ENST00000483530 TNIKQ9UKE5 1360 aa27.33■■□□□ 1.97
RAB3IP-207ENST00000483530 ABCA5Q8WWZ7 1642 aa27.32■■□□□ 1.96
RAB3IP-207ENST00000483530 GAPVD1Q14C86 1478 aa27.31■■□□□ 1.96
RAB3IP-207ENST00000483530 UBTFP17480 764 aaKnown RBP27.3■■□□□ 1.96
RAB3IP-207ENST00000483530 ERICH3Q5RHP9 1530 aa27.3■■□□□ 1.96
RAB3IP-207ENST00000483530 CARMIL1Q5VZK9 1371 aa27.28■■□□□ 1.96
RAB3IP-207ENST00000483530 AQRO60306 1485 aaKnown RBP eCLIP27.24■■□□□ 1.95
RAB3IP-207ENST00000483530 ZNF608Q9ULD9 1512 aaPredicted RBP27.23■■□□□ 1.95
RAB3IP-207ENST00000483530 CUL7Q14999 1698 aa27.14■■□□□ 1.94
RAB3IP-207ENST00000483530 CEP162Q5TB80 1403 aa27.12■■□□□ 1.93
RAB3IP-207ENST00000483530 GRIN2BQ13224 1484 aa27.12■■□□□ 1.93
RAB3IP-207ENST00000483530 PBRM1Q86U86 1689 aa27.08■■□□□ 1.93
RAB3IP-207ENST00000483530 EIF4G3O43432 1585 aaKnown RBP27.07■■□□□ 1.92
RAB3IP-207ENST00000483530 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
RAB3IP-207ENST00000483530 ADAMTS12P58397 1594 aa26.96■■□□□ 1.91
RAB3IP-207ENST00000483530 CLIP1P30622 1438 aa26.95■■□□□ 1.91
RAB3IP-207ENST00000483530 SNAPC4Q5SXM2 1469 aa26.94■■□□□ 1.9
RAB3IP-207ENST00000483530 MAGI1Q96QZ7 1491 aaPredicted RBP26.9■■□□□ 1.9
RAB3IP-207ENST00000483530 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
RAB3IP-207ENST00000483530 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
RAB3IP-207ENST00000483530 GRIN2AQ12879 1464 aa26.79■■□□□ 1.88
RAB3IP-207ENST00000483530 CTTNBP2Q8WZ74 1663 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms