RNA–Protein interactions for RNA: ENST00000561715.1

AC140479.4-201, humanhuman

TSL 4 BASIC

Gene AC140479.4, Length 463 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC140479.4-201ENST00000561715 NISCHQ9Y2I1 1504 aa47.8■■■■■ 5.24
AC140479.4-201ENST00000561715 CCDC180Q9P1Z9 1646 aa42.57■■■■■ 4.4
AC140479.4-201ENST00000561715 ABCC9O60706 1549 aa41.62■■■■■ 4.25
AC140479.4-201ENST00000561715 RB1CC1Q8TDY2 1594 aa40.01■■■■■ 4
AC140479.4-201ENST00000561715 NACADO15069 1562 aa39.94■■■■□ 3.98
AC140479.4-201ENST00000561715 ZCCHC6Q5VYS8 1495 aaKnown RBP39.84■■■■□ 3.97
AC140479.4-201ENST00000561715 DCAF8L2P0C7V8 631 aa39.84■■■■□ 3.97
AC140479.4-201ENST00000561715 MYO15BQ96JP2 1530 aa39.67■■■■□ 3.94
AC140479.4-201ENST00000561715 DCAF1Q9Y4B6 1507 aa39.52■■■■□ 3.92
AC140479.4-201ENST00000561715 UNC13AQ9UPW8 1703 aa39.26■■■■□ 3.87
AC140479.4-201ENST00000561715 BICRAQ9NZM4 1560 aa38.87■■■■□ 3.81
AC140479.4-201ENST00000561715 SCRIBQ14160 1630 aa38.85■■■■□ 3.81
AC140479.4-201ENST00000561715 PABPN1Q86U42 306 aaKnown RBP eCLIP38.83■■■■□ 3.81
AC140479.4-201ENST00000561715 DNAJC5BQ9UF47 199 aa38.83■■■■□ 3.81
AC140479.4-201ENST00000561715 SHROOM4Q9ULL8 1493 aa38.35■■■■□ 3.73
AC140479.4-201ENST00000561715 EIF4G1Q04637 1599 aaKnown RBP37.8■■■■□ 3.64
AC140479.4-201ENST00000561715 CC2D2AQ9P2K1 1620 aa37.67■■■■□ 3.62
AC140479.4-201ENST00000561715 CECR2Q9BXF3 1484 aa37.36■■■■□ 3.57
AC140479.4-201ENST00000561715 SMARCA4P51532 1647 aa37.14■■■■□ 3.54
AC140479.4-201ENST00000561715 BAZ1AQ9NRL2 1556 aaPredicted RBP37.04■■■■□ 3.52
AC140479.4-201ENST00000561715 ATAD2BQ9ULI0 1458 aa36.88■■■■□ 3.49
AC140479.4-201ENST00000561715 MROH2BQ7Z745 1585 aa36.87■■■■□ 3.49
AC140479.4-201ENST00000561715 SMARCA2P51531 1590 aa36.84■■■■□ 3.49
AC140479.4-201ENST00000561715 NCAPD3P42695 1498 aa36.83■■■■□ 3.49
AC140479.4-201ENST00000561715 PEG3Q9GZU2 1588 aa36.74■■■■□ 3.47
AC140479.4-201ENST00000561715 HMGXB3Q12766 1538 aa36.7■■■■□ 3.47
AC140479.4-201ENST00000561715 BAZ1BQ9UIG0 1483 aaKnown RBP36.58■■■■□ 3.45
AC140479.4-201ENST00000561715 WIZO95785 1651 aa36.51■■■■□ 3.44
AC140479.4-201ENST00000561715 RSF1Q96T23 1441 aaPredicted RBP36.39■■■■□ 3.42
AC140479.4-201ENST00000561715 TOP2AP11388 1531 aaKnown RBP36.08■■■■□ 3.37
AC140479.4-201ENST00000561715 NESP48681 1621 aa36.04■■■■□ 3.36
AC140479.4-201ENST00000561715 LAMC3Q9Y6N6 1575 aa35.91■■■■□ 3.34
AC140479.4-201ENST00000561715 ERCC6Q03468 1493 aa35.83■■■■□ 3.33
AC140479.4-201ENST00000561715 DNAJC5Q9H3Z4 198 aa35.79■■■■□ 3.32
AC140479.4-201ENST00000561715 CADPSQ9ULU8 1353 aa35.74■■■■□ 3.31
AC140479.4-201ENST00000561715 KIF21AQ7Z4S6 1674 aa35.68■■■■□ 3.3
AC140479.4-201ENST00000561715 CCDC88BA6NC98 1476 aa35.62■■■■□ 3.29
AC140479.4-201ENST00000561715 CUX2O14529 1486 aa35.61■■■■□ 3.29
AC140479.4-201ENST00000561715 PDS5BQ9NTI5 1447 aa35.59■■■■□ 3.29
AC140479.4-201ENST00000561715 CFTRP13569 1480 aa35.56■■■■□ 3.28
AC140479.4-201ENST00000561715 THOC2Q8NI27 1593 aaKnown RBP35.54■■■■□ 3.28
AC140479.4-201ENST00000561715 PRDM2Q13029 1718 aa35.43■■■■□ 3.26
AC140479.4-201ENST00000561715 SUPT5HO00267 1087 aaKnown RBP35.42■■■■□ 3.26
AC140479.4-201ENST00000561715 FANCD2Q9BXW9 1451 aa35.38■■■■□ 3.25
AC140479.4-201ENST00000561715 CEP164Q9UPV0 1460 aa35.35■■■■□ 3.25
AC140479.4-201ENST00000561715 MRC2Q9UBG0 1479 aa35.29■■■■□ 3.24
AC140479.4-201ENST00000561715 WDR62O43379 1518 aa35.21■■■■□ 3.23
AC140479.4-201ENST00000561715 URB2Q14146 1524 aaKnown RBP35.07■■■■□ 3.21
AC140479.4-201ENST00000561715 TOPBP1Q92547 1522 aa34.84■■■■□ 3.17
AC140479.4-201ENST00000561715 DNMBPQ6XZF7 1577 aa34.81■■■■□ 3.16
AC140479.4-201ENST00000561715 ABCC8Q09428 1581 aa34.74■■■■□ 3.15
AC140479.4-201ENST00000561715 CUX1P39880 1505 aa34.6■■■■□ 3.13
AC140479.4-201ENST00000561715 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
AC140479.4-201ENST00000561715 POLA1P09884 1462 aaPredicted RBP34.54■■■■□ 3.12
AC140479.4-201ENST00000561715 TARBP1Q13395 1621 aaKnown RBP34.5■■■■□ 3.11
AC140479.4-201ENST00000561715 ZNF608Q9ULD9 1512 aaPredicted RBP34.48■■■■□ 3.11
AC140479.4-201ENST00000561715 FGD5Q6ZNL6 1462 aa34.46■■■■□ 3.11
AC140479.4-201ENST00000561715 EIF4G3O43432 1585 aaKnown RBP34.4■■■■□ 3.1
AC140479.4-201ENST00000561715 RAD54L2Q9Y4B4 1467 aa34.39■■■■□ 3.1
AC140479.4-201ENST00000561715 SOGA1O94964 1423 aa34.34■■■■□ 3.09
AC140479.4-201ENST00000561715 SYNJ1O43426 1573 aa34.32■■■■□ 3.09
AC140479.4-201ENST00000561715 BIVM-ERCC5R4GMW8 1640 aa34.32■■■■□ 3.08
AC140479.4-201ENST00000561715 WRNQ14191 1432 aaPredicted RBP eCLIP34.3■■■■□ 3.08
AC140479.4-201ENST00000561715 TOP2BQ02880 1626 aa34.29■■■■□ 3.08
AC140479.4-201ENST00000561715 WDR97A6NE52 1622 aa34.27■■■■□ 3.08
AC140479.4-201ENST00000561715 AQRO60306 1485 aaKnown RBP eCLIP34.25■■■■□ 3.07
AC140479.4-201ENST00000561715 TRIM41Q8WV44 630 aa34.17■■■■□ 3.06
AC140479.4-201ENST00000561715 TDRD9Q8NDG6 1382 aaKnown RBP34.16■■■■□ 3.06
AC140479.4-201ENST00000561715 ABCA10Q8WWZ4 1543 aa34.1■■■■□ 3.05
AC140479.4-201ENST00000561715 ABCA5Q8WWZ7 1642 aa34.04■■■■□ 3.04
AC140479.4-201ENST00000561715 PBRM1Q86U86 1689 aa34.02■■■■□ 3.04
AC140479.4-201ENST00000561715 CHD1O14646 1710 aa33.99■■■■□ 3.03
AC140479.4-201ENST00000561715 GAPVD1Q14C86 1478 aa33.97■■■■□ 3.03
AC140479.4-201ENST00000561715 GRIN2BQ13224 1484 aa33.96■■■■□ 3.03
AC140479.4-201ENST00000561715 SNAPC4Q5SXM2 1469 aa33.96■■■■□ 3.03
AC140479.4-201ENST00000561715 OSCARQ8IYS5 282 aa33.89■■■■□ 3.02
AC140479.4-201ENST00000561715 MAGI1Q96QZ7 1491 aaPredicted RBP33.88■■■■□ 3.01
AC140479.4-201ENST00000561715 FBLN2P98095 1184 aa33.77■■■■□ 3
AC140479.4-201ENST00000561715 SYNJ2O15056 1496 aa33.75■■■□□ 2.99
AC140479.4-201ENST00000561715 ADAMTS12P58397 1594 aa33.72■■■□□ 2.99
AC140479.4-201ENST00000561715 ERICH3Q5RHP9 1530 aa33.69■■■□□ 2.98
AC140479.4-201ENST00000561715 CHMP7Q8WUX9 453 aaPredicted RBP33.66■■■□□ 2.98
AC140479.4-201ENST00000561715 RIMBP3CA6NJZ7 1639 aa33.63■■■□□ 2.97
AC140479.4-201ENST00000561715 RIMBP3BA6NNM3 1639 aa33.63■■■□□ 2.97
AC140479.4-201ENST00000561715 RIMBP3Q9UFD9 1639 aa33.63■■■□□ 2.97
AC140479.4-201ENST00000561715 CLASP1Q7Z460 1538 aa33.57■■■□□ 2.96
AC140479.4-201ENST00000561715 KIF27Q86VH2 1401 aa33.56■■■□□ 2.96
AC140479.4-201ENST00000561715 GRIN2AQ12879 1464 aa33.56■■■□□ 2.96
AC140479.4-201ENST00000561715 FHAD1B1AJZ9 1412 aa33.55■■■□□ 2.96
AC140479.4-201ENST00000561715 ARHGEF11O15085 1522 aa33.48■■■□□ 2.95
AC140479.4-201ENST00000561715 CEP170Q5SW79 1584 aa33.44■■■□□ 2.94
AC140479.4-201ENST00000561715 CUL7Q14999 1698 aa33.43■■■□□ 2.94
AC140479.4-201ENST00000561715 IGF1RP08069 1367 aa33.42■■■□□ 2.94
AC140479.4-201ENST00000561715 NUP160Q12769 1436 aa33.39■■■□□ 2.94
AC140479.4-201ENST00000561715 RUSC2Q8N2Y8 1516 aa33.35■■■□□ 2.93
AC140479.4-201ENST00000561715 ARAP1Q96P48 1450 aa33.22■■■□□ 2.91
AC140479.4-201ENST00000561715 CARMIL1Q5VZK9 1371 aa33.21■■■□□ 2.91
AC140479.4-201ENST00000561715 SHROOM2Q13796 1616 aa33.2■■■□□ 2.91
AC140479.4-201ENST00000561715 ERCC6L2Q5T890 1561 aa33.14■■■□□ 2.9
AC140479.4-201ENST00000561715 CYB5RLQ6IPT4 315 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms