RNA–Protein interactions for RNA: ENST00000324727.8

SCN4B-201, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4B, Length 4,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-201ENST00000324727 DCAF8L2P0C7V8 631 aa21.17■□□□□ 0.98
SCN4B-201ENST00000324727 NISCHQ9Y2I1 1504 aa20.42■□□□□ 0.86
SCN4B-201ENST00000324727 SUPT5HO00267 1087 aaKnown RBP19.83■□□□□ 0.76
SCN4B-201ENST00000324727 SHROOM4Q9ULL8 1493 aa19.75■□□□□ 0.75
SCN4B-201ENST00000324727 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.68
SCN4B-201ENST00000324727 FAM9AQ8IZU1 332 aaPredicted RBP18.74■□□□□ 0.59
SCN4B-201ENST00000324727 PELP1Q8IZL8 1130 aaKnown RBP18.73■□□□□ 0.59
SCN4B-201ENST00000324727 TTBK1Q5TCY1 1321 aaPredicted RBP18.47■□□□□ 0.55
SCN4B-201ENST00000324727 MYT1Q01538 1121 aa18.47■□□□□ 0.55
SCN4B-201ENST00000324727 RANGAP1P46060 587 aaPredicted RBP18.43■□□□□ 0.54
SCN4B-201ENST00000324727 PCGF6Q9BYE7 350 aa18.24■□□□□ 0.51
SCN4B-201ENST00000324727 TRIM41Q8WV44 630 aa18.19■□□□□ 0.5
SCN4B-201ENST00000324727 APLP2Q06481 763 aa18.16■□□□□ 0.5
SCN4B-201ENST00000324727 ATP1B4Q9UN42 357 aaPredicted RBP18.05■□□□□ 0.48
SCN4B-201ENST00000324727 ABCC9O60706 1549 aa18.01■□□□□ 0.47
SCN4B-201ENST00000324727 CENPBP07199 599 aaPredicted RBP18■□□□□ 0.47
SCN4B-201ENST00000324727 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
SCN4B-201ENST00000324727 UBTFP17480 764 aaKnown RBP17.96■□□□□ 0.47
SCN4B-201ENST00000324727 PPARGC1BQ86YN6 1023 aaKnown RBP17.92■□□□□ 0.46
SCN4B-201ENST00000324727 HRCP23327 699 aa17.86■□□□□ 0.45
SCN4B-201ENST00000324727 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.45
SCN4B-201ENST00000324727 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
SCN4B-201ENST00000324727 ERICH6Q7L0X2 663 aa17.61■□□□□ 0.41
SCN4B-201ENST00000324727 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
SCN4B-201ENST00000324727 CCER1Q8TC90 406 aaPredicted RBP17.54■□□□□ 0.4
SCN4B-201ENST00000324727 ITGAEP38570 1179 aa17.46■□□□□ 0.39
SCN4B-201ENST00000324727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.46■□□□□ 0.39
SCN4B-201ENST00000324727 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.39
SCN4B-201ENST00000324727 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
SCN4B-201ENST00000324727 TRIM26Q12899 539 aaPredicted RBP17.29■□□□□ 0.36
SCN4B-201ENST00000324727 MYT1LQ9UL68 1186 aa17.27■□□□□ 0.35
SCN4B-201ENST00000324727 NEFLP07196 543 aa17.18■□□□□ 0.34
SCN4B-201ENST00000324727 FBLN2P98095 1184 aa17.16■□□□□ 0.34
SCN4B-201ENST00000324727 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
SCN4B-201ENST00000324727 CNGB1Q14028 1251 aaPredicted RBP17.05■□□□□ 0.32
SCN4B-201ENST00000324727 ARID3CA6NKF2 412 aa17.02■□□□□ 0.32
SCN4B-201ENST00000324727 POLR3GLQ9BT43 218 aa17.01■□□□□ 0.31
SCN4B-201ENST00000324727 P3H3Q8IVL6 736 aa17■□□□□ 0.31
SCN4B-201ENST00000324727 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
SCN4B-201ENST00000324727 DIEXFQ68CQ4 756 aaKnown RBP16.94■□□□□ 0.3
SCN4B-201ENST00000324727 FAM50AQ14320 339 aaKnown RBP16.92■□□□□ 0.3
SCN4B-201ENST00000324727 ACIN1Q9UKV3 1341 aaKnown RBP16.87■□□□□ 0.29
SCN4B-201ENST00000324727 ZCCHC6Q5VYS8 1495 aaKnown RBP16.83■□□□□ 0.28
SCN4B-201ENST00000324727 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
SCN4B-201ENST00000324727 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.27
SCN4B-201ENST00000324727 TRIM52Q96A61 297 aa16.74■□□□□ 0.27
SCN4B-201ENST00000324727 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
SCN4B-201ENST00000324727 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
SCN4B-201ENST00000324727 NEUROD1Q13562 356 aa16.7■□□□□ 0.26
SCN4B-201ENST00000324727 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
SCN4B-201ENST00000324727 RTL5Q5HYW3 569 aaPredicted RBP16.64■□□□□ 0.25
SCN4B-201ENST00000324727 ZNF326Q5BKZ1 582 aaKnown RBP16.62■□□□□ 0.25
SCN4B-201ENST00000324727 ZNF777Q9ULD5 760 aaPredicted RBP16.61■□□□□ 0.25
SCN4B-201ENST00000324727 BCANQ96GW7 911 aa16.55■□□□□ 0.24
SCN4B-201ENST00000324727 DAXXQ9UER7 740 aaPredicted RBP16.53■□□□□ 0.24
SCN4B-201ENST00000324727 CCDC180Q9P1Z9 1646 aa16.51■□□□□ 0.23
SCN4B-201ENST00000324727 PLPPR3Q6T4P5 718 aa16.45■□□□□ 0.22
SCN4B-201ENST00000324727 RSF1Q96T23 1441 aaPredicted RBP16.41■□□□□ 0.22
SCN4B-201ENST00000324727 ZNF316A6NFI3 1004 aaPredicted RBP16.4■□□□□ 0.22
SCN4B-201ENST00000324727 RB1CC1Q8TDY2 1594 aa16.4■□□□□ 0.22
SCN4B-201ENST00000324727 CHMP7Q8WUX9 453 aaPredicted RBP16.36■□□□□ 0.21
SCN4B-201ENST00000324727 CHIC2Q9UKJ5 165 aa16.36■□□□□ 0.21
SCN4B-201ENST00000324727 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
SCN4B-201ENST00000324727 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
SCN4B-201ENST00000324727 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.19
SCN4B-201ENST00000324727 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
SCN4B-201ENST00000324727 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
SCN4B-201ENST00000324727 CLSPNQ9HAW4 1339 aa16.25■□□□□ 0.19
SCN4B-201ENST00000324727 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
SCN4B-201ENST00000324727 KCNH8Q96L42 1107 aa16.23■□□□□ 0.19
SCN4B-201ENST00000324727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.19
SCN4B-201ENST00000324727 NACADO15069 1562 aa16.21■□□□□ 0.19
SCN4B-201ENST00000324727 ANP32EQ9BTT0 268 aa16.2■□□□□ 0.18
SCN4B-201ENST00000324727 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
SCN4B-201ENST00000324727 BCL11AQ9H165 835 aa16.18■□□□□ 0.18
SCN4B-201ENST00000324727 FKBP8Q14318 412 aa16.12■□□□□ 0.17
SCN4B-201ENST00000324727 ESF1Q9H501 851 aaKnown RBP16.12■□□□□ 0.17
SCN4B-201ENST00000324727 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
SCN4B-201ENST00000324727 MTUS2Q5JR59 1369 aa16.08■□□□□ 0.16
SCN4B-201ENST00000324727 RRP7BPQ9NSQ0 103 aa16.08■□□□□ 0.16
SCN4B-201ENST00000324727 CLIP1P30622 1438 aa16.08■□□□□ 0.16
SCN4B-201ENST00000324727 HIRIP3Q9BW71 556 aaPredicted RBP16.08■□□□□ 0.16
SCN4B-201ENST00000324727 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
SCN4B-201ENST00000324727 ANP32CO43423 234 aa16.06■□□□□ 0.16
SCN4B-201ENST00000324727 KDM2AQ9Y2K7 1162 aa16.05■□□□□ 0.16
SCN4B-201ENST00000324727 ANP32AP39687 249 aaKnown RBP16.04■□□□□ 0.16
SCN4B-201ENST00000324727 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
SCN4B-201ENST00000324727 TSPY4P0CV99 314 aa16.04■□□□□ 0.16
SCN4B-201ENST00000324727 TSPY10P0CW01 314 aa16.04■□□□□ 0.16
SCN4B-201ENST00000324727 GLIPR1L2Q4G1C9 344 aa16.01■□□□□ 0.15
SCN4B-201ENST00000324727 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
SCN4B-201ENST00000324727 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
SCN4B-201ENST00000324727 DDX10Q13206 875 aaKnown RBP15.97■□□□□ 0.15
SCN4B-201ENST00000324727 NBR1Q14596 966 aa15.97■□□□□ 0.15
SCN4B-201ENST00000324727 PLEKHD1A6NEE1 506 aa15.97■□□□□ 0.15
SCN4B-201ENST00000324727 MIER1Q8N108 512 aa15.96■□□□□ 0.15
SCN4B-201ENST00000324727 TONSLQ96HA7 1378 aa15.96■□□□□ 0.15
SCN4B-201ENST00000324727 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
SCN4B-201ENST00000324727 SOGA1O94964 1423 aa15.94■□□□□ 0.14
SCN4B-201ENST00000324727 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms