RNA–Protein interactions for RNA: ENST00000412105.1

MIPEPP3-201, Transcript of mitochondrial intermediate peptidase pseudogene 3, humanhuman

BASIC

Gene MIPEPP3, Length 444 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIPEPP3-201ENST00000412105 NISCHQ9Y2I1 1504 aa50.54■■■■■ 5.68
MIPEPP3-201ENST00000412105 CCDC180Q9P1Z9 1646 aa45.02■■■■■ 4.8
MIPEPP3-201ENST00000412105 ABCC9O60706 1549 aa44.56■■■■■ 4.72
MIPEPP3-201ENST00000412105 RB1CC1Q8TDY2 1594 aa42.62■■■■■ 4.41
MIPEPP3-201ENST00000412105 NACADO15069 1562 aa42.48■■■■■ 4.39
MIPEPP3-201ENST00000412105 DCAF8L2P0C7V8 631 aa42.47■■■■■ 4.39
MIPEPP3-201ENST00000412105 MYO15BQ96JP2 1530 aa42.1■■■■■ 4.33
MIPEPP3-201ENST00000412105 ZCCHC6Q5VYS8 1495 aaKnown RBP42■■■■■ 4.31
MIPEPP3-201ENST00000412105 DCAF1Q9Y4B6 1507 aa41.77■■■■■ 4.28
MIPEPP3-201ENST00000412105 PABPN1Q86U42 306 aaKnown RBP eCLIP41.62■■■■■ 4.25
MIPEPP3-201ENST00000412105 UNC13AQ9UPW8 1703 aa41.58■■■■■ 4.25
MIPEPP3-201ENST00000412105 BICRAQ9NZM4 1560 aa41.37■■■■■ 4.21
MIPEPP3-201ENST00000412105 DNAJC5BQ9UF47 199 aa41.35■■■■■ 4.21
MIPEPP3-201ENST00000412105 SCRIBQ14160 1630 aa41.11■■■■■ 4.17
MIPEPP3-201ENST00000412105 SHROOM4Q9ULL8 1493 aa40.86■■■■■ 4.13
MIPEPP3-201ENST00000412105 EIF4G1Q04637 1599 aaKnown RBP40.31■■■■■ 4.04
MIPEPP3-201ENST00000412105 CC2D2AQ9P2K1 1620 aa40.25■■■■■ 4.03
MIPEPP3-201ENST00000412105 CECR2Q9BXF3 1484 aa40.07■■■■■ 4.01
MIPEPP3-201ENST00000412105 SMARCA4P51532 1647 aa39.27■■■■□ 3.88
MIPEPP3-201ENST00000412105 NCAPD3P42695 1498 aa39.25■■■■□ 3.87
MIPEPP3-201ENST00000412105 ATAD2BQ9ULI0 1458 aa39.21■■■■□ 3.87
MIPEPP3-201ENST00000412105 BAZ1AQ9NRL2 1556 aaPredicted RBP39.18■■■■□ 3.86
MIPEPP3-201ENST00000412105 SMARCA2P51531 1590 aa39.09■■■■□ 3.85
MIPEPP3-201ENST00000412105 HMGXB3Q12766 1538 aa38.96■■■■□ 3.83
MIPEPP3-201ENST00000412105 MROH2BQ7Z745 1585 aa38.95■■■■□ 3.83
MIPEPP3-201ENST00000412105 PEG3Q9GZU2 1588 aa38.9■■■■□ 3.82
MIPEPP3-201ENST00000412105 BAZ1BQ9UIG0 1483 aaKnown RBP38.84■■■■□ 3.81
MIPEPP3-201ENST00000412105 WIZO95785 1651 aa38.49■■■■□ 3.75
MIPEPP3-201ENST00000412105 NESP48681 1621 aa38.44■■■■□ 3.74
MIPEPP3-201ENST00000412105 ERCC6Q03468 1493 aa38.41■■■■□ 3.74
MIPEPP3-201ENST00000412105 RSF1Q96T23 1441 aaPredicted RBP38.38■■■■□ 3.73
MIPEPP3-201ENST00000412105 LAMC3Q9Y6N6 1575 aa38.23■■■■□ 3.71
MIPEPP3-201ENST00000412105 CUX2O14529 1486 aa38.15■■■■□ 3.7
MIPEPP3-201ENST00000412105 CADPSQ9ULU8 1353 aa38.09■■■■□ 3.69
MIPEPP3-201ENST00000412105 TOP2AP11388 1531 aaKnown RBP38.05■■■■□ 3.68
MIPEPP3-201ENST00000412105 PDS5BQ9NTI5 1447 aa38.03■■■■□ 3.68
MIPEPP3-201ENST00000412105 KIF21AQ7Z4S6 1674 aa37.89■■■■□ 3.66
MIPEPP3-201ENST00000412105 THOC2Q8NI27 1593 aaKnown RBP37.89■■■■□ 3.66
MIPEPP3-201ENST00000412105 CFTRP13569 1480 aa37.77■■■■□ 3.64
MIPEPP3-201ENST00000412105 CCDC88BA6NC98 1476 aa37.65■■■■□ 3.62
MIPEPP3-201ENST00000412105 MRC2Q9UBG0 1479 aa37.65■■■■□ 3.62
MIPEPP3-201ENST00000412105 FANCD2Q9BXW9 1451 aa37.64■■■■□ 3.62
MIPEPP3-201ENST00000412105 CEP164Q9UPV0 1460 aa37.61■■■■□ 3.61
MIPEPP3-201ENST00000412105 WDR62O43379 1518 aa37.53■■■■□ 3.6
MIPEPP3-201ENST00000412105 DNAJC5Q9H3Z4 198 aa37.53■■■■□ 3.6
MIPEPP3-201ENST00000412105 PRDM2Q13029 1718 aa37.3■■■■□ 3.56
MIPEPP3-201ENST00000412105 URB2Q14146 1524 aaKnown RBP37.3■■■■□ 3.56
MIPEPP3-201ENST00000412105 SUPT5HO00267 1087 aaKnown RBP37.13■■■■□ 3.53
MIPEPP3-201ENST00000412105 TOPBP1Q92547 1522 aa36.99■■■■□ 3.51
MIPEPP3-201ENST00000412105 ABCC8Q09428 1581 aa36.94■■■■□ 3.5
MIPEPP3-201ENST00000412105 DNMBPQ6XZF7 1577 aa36.87■■■■□ 3.49
MIPEPP3-201ENST00000412105 IFT140Q96RY7 1462 aa36.85■■■■□ 3.49
MIPEPP3-201ENST00000412105 ZNF608Q9ULD9 1512 aaPredicted RBP36.75■■■■□ 3.47
MIPEPP3-201ENST00000412105 POLA1P09884 1462 aaPredicted RBP36.65■■■■□ 3.46
MIPEPP3-201ENST00000412105 TARBP1Q13395 1621 aaKnown RBP36.59■■■■□ 3.45
MIPEPP3-201ENST00000412105 CUX1P39880 1505 aa36.56■■■■□ 3.44
MIPEPP3-201ENST00000412105 OSCARQ8IYS5 282 aa36.55■■■■□ 3.44
MIPEPP3-201ENST00000412105 EIF4G3O43432 1585 aaKnown RBP36.53■■■■□ 3.44
MIPEPP3-201ENST00000412105 RAD54L2Q9Y4B4 1467 aa36.52■■■■□ 3.44
MIPEPP3-201ENST00000412105 SOGA1O94964 1423 aa36.51■■■■□ 3.44
MIPEPP3-201ENST00000412105 AQRO60306 1485 aaKnown RBP eCLIP36.5■■■■□ 3.43
MIPEPP3-201ENST00000412105 FGD5Q6ZNL6 1462 aa36.5■■■■□ 3.43
MIPEPP3-201ENST00000412105 TDRD9Q8NDG6 1382 aaKnown RBP36.38■■■■□ 3.41
MIPEPP3-201ENST00000412105 WDR97A6NE52 1622 aa36.24■■■■□ 3.39
MIPEPP3-201ENST00000412105 WRNQ14191 1432 aaPredicted RBP eCLIP36.18■■■■□ 3.38
MIPEPP3-201ENST00000412105 FBLN2P98095 1184 aa36.16■■■■□ 3.38
MIPEPP3-201ENST00000412105 SNAPC4Q5SXM2 1469 aa36.12■■■■□ 3.37
MIPEPP3-201ENST00000412105 TRIM41Q8WV44 630 aa36.12■■■■□ 3.37
MIPEPP3-201ENST00000412105 ABCA10Q8WWZ4 1543 aa36.12■■■■□ 3.37
MIPEPP3-201ENST00000412105 GRIN2BQ13224 1484 aa36.11■■■■□ 3.37
MIPEPP3-201ENST00000412105 CHD1O14646 1710 aa36.11■■■■□ 3.37
MIPEPP3-201ENST00000412105 TOP2BQ02880 1626 aa36.1■■■■□ 3.37
MIPEPP3-201ENST00000412105 SYNJ1O43426 1573 aa36.1■■■■□ 3.37
MIPEPP3-201ENST00000412105 BIVM-ERCC5R4GMW8 1640 aa36.08■■■■□ 3.37
MIPEPP3-201ENST00000412105 GAPVD1Q14C86 1478 aa36.06■■■■□ 3.36
MIPEPP3-201ENST00000412105 MAGI1Q96QZ7 1491 aaPredicted RBP36.04■■■■□ 3.36
MIPEPP3-201ENST00000412105 CHMP7Q8WUX9 453 aaPredicted RBP35.99■■■■□ 3.35
MIPEPP3-201ENST00000412105 ABCA5Q8WWZ7 1642 aa35.98■■■■□ 3.35
MIPEPP3-201ENST00000412105 RIMBP3CA6NJZ7 1639 aa35.94■■■■□ 3.34
MIPEPP3-201ENST00000412105 RIMBP3BA6NNM3 1639 aa35.94■■■■□ 3.34
MIPEPP3-201ENST00000412105 RIMBP3Q9UFD9 1639 aa35.94■■■■□ 3.34
MIPEPP3-201ENST00000412105 PBRM1Q86U86 1689 aa35.94■■■■□ 3.34
MIPEPP3-201ENST00000412105 SYNJ2O15056 1496 aa35.92■■■■□ 3.34
MIPEPP3-201ENST00000412105 ARHGEF11O15085 1522 aa35.92■■■■□ 3.34
MIPEPP3-201ENST00000412105 CLASP1Q7Z460 1538 aa35.77■■■■□ 3.32
MIPEPP3-201ENST00000412105 CYB5RLQ6IPT4 315 aa35.67■■■■□ 3.3
MIPEPP3-201ENST00000412105 ADAMTS12P58397 1594 aa35.67■■■■□ 3.3
MIPEPP3-201ENST00000412105 ERICH3Q5RHP9 1530 aa35.67■■■■□ 3.3
MIPEPP3-201ENST00000412105 GRIN2AQ12879 1464 aa35.65■■■■□ 3.3
MIPEPP3-201ENST00000412105 FHAD1B1AJZ9 1412 aa35.64■■■■□ 3.3
MIPEPP3-201ENST00000412105 ARAP1Q96P48 1450 aa35.6■■■■□ 3.29
MIPEPP3-201ENST00000412105 NUP160Q12769 1436 aa35.51■■■■□ 3.28
MIPEPP3-201ENST00000412105 CEP170Q5SW79 1584 aa35.47■■■■□ 3.27
MIPEPP3-201ENST00000412105 KIF27Q86VH2 1401 aa35.46■■■■□ 3.27
MIPEPP3-201ENST00000412105 IGF1RP08069 1367 aa35.4■■■■□ 3.26
MIPEPP3-201ENST00000412105 ERCC6L2Q5T890 1561 aa35.27■■■■□ 3.24
MIPEPP3-201ENST00000412105 SHROOM2Q13796 1616 aa35.24■■■■□ 3.23
MIPEPP3-201ENST00000412105 CUL7Q14999 1698 aa35.22■■■■□ 3.23
MIPEPP3-201ENST00000412105 JPH4Q96JJ6 628 aa35.19■■■■□ 3.22
MIPEPP3-201ENST00000412105 CARMIL1Q5VZK9 1371 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms