RNA–Protein interactions for RNA: ENST00000378953.8

C5orf56-203, Transcript of chromosome 5 open reading frame 56, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C5orf56, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-203ENST00000378953 NISCHQ9Y2I1 1504 aa48.07■■■■■ 5.29
C5orf56-203ENST00000378953 CCDC180Q9P1Z9 1646 aa42.71■■■■■ 4.43
C5orf56-203ENST00000378953 ABCC9O60706 1549 aa42■■■■■ 4.31
C5orf56-203ENST00000378953 RB1CC1Q8TDY2 1594 aa40.31■■■■■ 4.04
C5orf56-203ENST00000378953 DCAF8L2P0C7V8 631 aa40.27■■■■■ 4.04
C5orf56-203ENST00000378953 NACADO15069 1562 aa40.25■■■■■ 4.03
C5orf56-203ENST00000378953 ZCCHC6Q5VYS8 1495 aaKnown RBP40■■■■□ 3.99
C5orf56-203ENST00000378953 MYO15BQ96JP2 1530 aa39.99■■■■□ 3.99
C5orf56-203ENST00000378953 DCAF1Q9Y4B6 1507 aa39.76■■■■□ 3.96
C5orf56-203ENST00000378953 UNC13AQ9UPW8 1703 aa39.28■■■■□ 3.88
C5orf56-203ENST00000378953 PABPN1Q86U42 306 aaKnown RBP eCLIP39.27■■■■□ 3.88
C5orf56-203ENST00000378953 BICRAQ9NZM4 1560 aa39.09■■■■□ 3.85
C5orf56-203ENST00000378953 SCRIBQ14160 1630 aa38.98■■■■□ 3.83
C5orf56-203ENST00000378953 DNAJC5BQ9UF47 199 aa38.72■■■■□ 3.79
C5orf56-203ENST00000378953 SHROOM4Q9ULL8 1493 aa38.69■■■■□ 3.78
C5orf56-203ENST00000378953 EIF4G1Q04637 1599 aaKnown RBP38.07■■■■□ 3.69
C5orf56-203ENST00000378953 CC2D2AQ9P2K1 1620 aa37.94■■■■□ 3.66
C5orf56-203ENST00000378953 CECR2Q9BXF3 1484 aa37.76■■■■□ 3.63
C5orf56-203ENST00000378953 SMARCA4P51532 1647 aa37.28■■■■□ 3.56
C5orf56-203ENST00000378953 BAZ1AQ9NRL2 1556 aaPredicted RBP37.25■■■■□ 3.55
C5orf56-203ENST00000378953 NCAPD3P42695 1498 aa37.19■■■■□ 3.54
C5orf56-203ENST00000378953 ATAD2BQ9ULI0 1458 aa37.17■■■■□ 3.54
C5orf56-203ENST00000378953 SMARCA2P51531 1590 aa37.09■■■■□ 3.53
C5orf56-203ENST00000378953 MROH2BQ7Z745 1585 aa37.04■■■■□ 3.52
C5orf56-203ENST00000378953 PEG3Q9GZU2 1588 aa36.95■■■■□ 3.51
C5orf56-203ENST00000378953 HMGXB3Q12766 1538 aa36.94■■■■□ 3.5
C5orf56-203ENST00000378953 BAZ1BQ9UIG0 1483 aaKnown RBP36.84■■■■□ 3.49
C5orf56-203ENST00000378953 RSF1Q96T23 1441 aaPredicted RBP36.6■■■■□ 3.45
C5orf56-203ENST00000378953 WIZO95785 1651 aa36.58■■■■□ 3.45
C5orf56-203ENST00000378953 NESP48681 1621 aa36.29■■■■□ 3.4
C5orf56-203ENST00000378953 TOP2AP11388 1531 aaKnown RBP36.22■■■■□ 3.39
C5orf56-203ENST00000378953 ERCC6Q03468 1493 aa36.2■■■■□ 3.39
C5orf56-203ENST00000378953 LAMC3Q9Y6N6 1575 aa36.16■■■■□ 3.38
C5orf56-203ENST00000378953 CADPSQ9ULU8 1353 aa36.1■■■■□ 3.37
C5orf56-203ENST00000378953 PDS5BQ9NTI5 1447 aa35.99■■■■□ 3.35
C5orf56-203ENST00000378953 CUX2O14529 1486 aa35.86■■■■□ 3.33
C5orf56-203ENST00000378953 CFTRP13569 1480 aa35.84■■■■□ 3.33
C5orf56-203ENST00000378953 CCDC88BA6NC98 1476 aa35.83■■■■□ 3.33
C5orf56-203ENST00000378953 KIF21AQ7Z4S6 1674 aa35.78■■■■□ 3.32
C5orf56-203ENST00000378953 THOC2Q8NI27 1593 aaKnown RBP35.72■■■■□ 3.31
C5orf56-203ENST00000378953 FANCD2Q9BXW9 1451 aa35.66■■■■□ 3.3
C5orf56-203ENST00000378953 CEP164Q9UPV0 1460 aa35.61■■■■□ 3.29
C5orf56-203ENST00000378953 SUPT5HO00267 1087 aaKnown RBP35.6■■■■□ 3.29
C5orf56-203ENST00000378953 MRC2Q9UBG0 1479 aa35.6■■■■□ 3.29
C5orf56-203ENST00000378953 WDR62O43379 1518 aa35.46■■■■□ 3.27
C5orf56-203ENST00000378953 PRDM2Q13029 1718 aa35.4■■■■□ 3.26
C5orf56-203ENST00000378953 URB2Q14146 1524 aaKnown RBP35.3■■■■□ 3.24
C5orf56-203ENST00000378953 DNAJC5Q9H3Z4 198 aa35.17■■■■□ 3.22
C5orf56-203ENST00000378953 ABCC8Q09428 1581 aa35.07■■■■□ 3.2
C5orf56-203ENST00000378953 TOPBP1Q92547 1522 aa35.06■■■■□ 3.2
C5orf56-203ENST00000378953 DNMBPQ6XZF7 1577 aa34.99■■■■□ 3.19
C5orf56-203ENST00000378953 IFT140Q96RY7 1462 aa34.89■■■■□ 3.18
C5orf56-203ENST00000378953 POLA1P09884 1462 aaPredicted RBP34.77■■■■□ 3.16
C5orf56-203ENST00000378953 CUX1P39880 1505 aa34.75■■■■□ 3.15
C5orf56-203ENST00000378953 ZNF608Q9ULD9 1512 aaPredicted RBP34.74■■■■□ 3.15
C5orf56-203ENST00000378953 TARBP1Q13395 1621 aaKnown RBP34.66■■■■□ 3.14
C5orf56-203ENST00000378953 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
C5orf56-203ENST00000378953 SOGA1O94964 1423 aa34.65■■■■□ 3.14
C5orf56-203ENST00000378953 RAD54L2Q9Y4B4 1467 aa34.63■■■■□ 3.13
C5orf56-203ENST00000378953 AQRO60306 1485 aaKnown RBP eCLIP34.55■■■■□ 3.12
C5orf56-203ENST00000378953 EIF4G3O43432 1585 aaKnown RBP34.53■■■■□ 3.12
C5orf56-203ENST00000378953 WRNQ14191 1432 aaPredicted RBP eCLIP34.5■■■■□ 3.11
C5orf56-203ENST00000378953 TDRD9Q8NDG6 1382 aaKnown RBP34.48■■■■□ 3.11
C5orf56-203ENST00000378953 OSCARQ8IYS5 282 aa34.42■■■■□ 3.1
C5orf56-203ENST00000378953 TOP2BQ02880 1626 aa34.39■■■■□ 3.1
C5orf56-203ENST00000378953 WDR97A6NE52 1622 aa34.37■■■■□ 3.09
C5orf56-203ENST00000378953 SYNJ1O43426 1573 aa34.37■■■■□ 3.09
C5orf56-203ENST00000378953 BIVM-ERCC5R4GMW8 1640 aa34.36■■■■□ 3.09
C5orf56-203ENST00000378953 ABCA10Q8WWZ4 1543 aa34.32■■■■□ 3.08
C5orf56-203ENST00000378953 GRIN2BQ13224 1484 aa34.24■■■■□ 3.07
C5orf56-203ENST00000378953 GAPVD1Q14C86 1478 aa34.22■■■■□ 3.07
C5orf56-203ENST00000378953 SNAPC4Q5SXM2 1469 aa34.19■■■■□ 3.06
C5orf56-203ENST00000378953 FBLN2P98095 1184 aa34.18■■■■□ 3.06
C5orf56-203ENST00000378953 MAGI1Q96QZ7 1491 aaPredicted RBP34.15■■■■□ 3.06
C5orf56-203ENST00000378953 ABCA5Q8WWZ7 1642 aa34.15■■■■□ 3.06
C5orf56-203ENST00000378953 CHD1O14646 1710 aa34.08■■■■□ 3.05
C5orf56-203ENST00000378953 CHMP7Q8WUX9 453 aaPredicted RBP34.07■■■■□ 3.04
C5orf56-203ENST00000378953 PBRM1Q86U86 1689 aa34.05■■■■□ 3.04
C5orf56-203ENST00000378953 SYNJ2O15056 1496 aa34.03■■■■□ 3.04
C5orf56-203ENST00000378953 ERICH3Q5RHP9 1530 aa33.89■■■■□ 3.02
C5orf56-203ENST00000378953 TRIM41Q8WV44 630 aa33.84■■■■□ 3.01
C5orf56-203ENST00000378953 FHAD1B1AJZ9 1412 aa33.84■■■■□ 3.01
C5orf56-203ENST00000378953 ADAMTS12P58397 1594 aa33.83■■■■□ 3.01
C5orf56-203ENST00000378953 KIF27Q86VH2 1401 aa33.8■■■■□ 3
C5orf56-203ENST00000378953 ARHGEF11O15085 1522 aa33.79■■■■□ 3
C5orf56-203ENST00000378953 GRIN2AQ12879 1464 aa33.79■■■■□ 3
C5orf56-203ENST00000378953 CLASP1Q7Z460 1538 aa33.79■■■■□ 3
C5orf56-203ENST00000378953 RIMBP3CA6NJZ7 1639 aa33.77■■■■□ 3
C5orf56-203ENST00000378953 RIMBP3BA6NNM3 1639 aa33.77■■■■□ 3
C5orf56-203ENST00000378953 RIMBP3Q9UFD9 1639 aa33.77■■■■□ 3
C5orf56-203ENST00000378953 IGF1RP08069 1367 aa33.72■■■□□ 2.99
C5orf56-203ENST00000378953 NUP160Q12769 1436 aa33.66■■■□□ 2.98
C5orf56-203ENST00000378953 CEP170Q5SW79 1584 aa33.6■■■□□ 2.97
C5orf56-203ENST00000378953 CYB5RLQ6IPT4 315 aa33.55■■■□□ 2.96
C5orf56-203ENST00000378953 ARAP1Q96P48 1450 aa33.52■■■□□ 2.96
C5orf56-203ENST00000378953 CUL7Q14999 1698 aa33.52■■■□□ 2.96
C5orf56-203ENST00000378953 CARMIL1Q5VZK9 1371 aa33.49■■■□□ 2.95
C5orf56-203ENST00000378953 RUSC2Q8N2Y8 1516 aa33.44■■■□□ 2.94
C5orf56-203ENST00000378953 SHROOM2Q13796 1616 aa33.36■■■□□ 2.93
C5orf56-203ENST00000378953 JPH4Q96JJ6 628 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms