Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.532e-6■□□□□ 10.2
EIF3DO15371 ARID1B-201ENST00000319584 2199 ntTSL 213.92□□□□□ -0.182e-6■□□□□ 10.2
EIF3DO15371 ARID1B-205ENST00000414678 6528 ntAPPRIS ALT2 TSL 59.02□□□□□ -0.962e-6■□□□□ 10.2
EIF3DO15371 ARID1B-206ENST00000452544 4443 ntTSL 27.69□□□□□ -1.182e-6■□□□□ 10.2
EIF3DO15371 ARID1B-231ENST00000637887 1468 ntTSL 55.51□□□□□ -1.532e-6■□□□□ 10.2
EIF3DO15371 PNN-204ENST00000554902 583 ntTSL 24.37□□□□□ -1.711e-9■□□□□ 10.2
EIF3DO15371 PNN-206ENST00000557680 912 ntTSL 34.2□□□□□ -1.741e-9■□□□□ 10.2
EIF3DO15371 HSP90AA1-203ENST00000553585 581 ntTSL 36.03□□□□□ -1.446e-8■□□□□ 10.2
EIF3DO15371 ITPR2-210ENST00000545902 581 ntTSL 34.97□□□□□ -1.612e-10■□□□□ 10.2
EIF3DO15371 PKD1-226ENST00000562425 608 ntTSL 317.89■□□□□ 0.451e-6■□□□□ 10.2
EIF3DO15371 HYOU1-203ENST00000527038 629 ntTSL 224.65■■□□□ 1.545e-7■□□□□ 10.2
EIF3DO15371 HYOU1-201ENST00000526354 568 ntTSL 222.89■■□□□ 1.255e-7■□□□□ 10.2
EIF3DO15371 HYOU1-214ENST00000534233 711 ntTSL 221.39■■□□□ 1.015e-7■□□□□ 10.2
EIF3DO15371 HYOU1-206ENST00000530467 552 ntTSL 421.3■■□□□ 15e-7■□□□□ 10.2
EIF3DO15371 HYOU1-211ENST00000532421 582 ntTSL 220.97■□□□□ 0.955e-7■□□□□ 10.2
EIF3DO15371 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.42■□□□□ 0.865e-7■□□□□ 10.2
EIF3DO15371 HYOU1-205ENST00000529174 549 ntTSL 418.93■□□□□ 0.625e-7■□□□□ 10.2
EIF3DO15371 HYOU1-215ENST00000543287 2464 ntTSL 218.88■□□□□ 0.615e-7■□□□□ 10.2
EIF3DO15371 VARS2-204ENST00000467717 863 ntTSL 318.76■□□□□ 0.595e-7■□□□□ 10.2
EIF3DO15371 IPO4-220ENST00000561462 1864 ntTSL 218.09■□□□□ 0.495e-7■□□□□ 10.2
EIF3DO15371 HYOU1-222ENST00000622474 549 ntTSL 217.54■□□□□ 0.45e-7■□□□□ 10.2
EIF3DO15371 PCNX3-205ENST00000531280 472 ntTSL 517.29■□□□□ 0.365e-7■□□□□ 10.2
EIF3DO15371 IPO4-205ENST00000558233 1015 ntTSL 516.99■□□□□ 0.315e-7■□□□□ 10.2
EIF3DO15371 VARS2-203ENST00000428017 1103 ntTSL 216.61■□□□□ 0.255e-7■□□□□ 10.2
EIF3DO15371 HYOU1-216ENST00000610597 491 ntTSL 416.41■□□□□ 0.225e-7■□□□□ 10.2
EIF3DO15371 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.175e-7■□□□□ 10.2
EIF3DO15371 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.71■□□□□ 0.115e-7■□□□□ 10.2
EIF3DO15371 HYOU1-210ENST00000531968 550 ntTSL 414.69□□□□□ -0.065e-7■□□□□ 10.2
EIF3DO15371 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.145e-7■□□□□ 10.2
EIF3DO15371 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC13.75□□□□□ -0.215e-7■□□□□ 10.2
EIF3DO15371 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.57□□□□□ -0.45e-7■□□□□ 10.2
EIF3DO15371 FANCA-217ENST00000564969 850 ntTSL 312.47□□□□□ -0.415e-7■□□□□ 10.2
EIF3DO15371 VARS2-210ENST00000490699 719 ntTSL 312.05□□□□□ -0.485e-7■□□□□ 10.2
EIF3DO15371 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.433e-8■□□□□ 10.2
EIF3DO15371 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.442e-8■□□□□ 10.2
EIF3DO15371 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.642e-8■□□□□ 10.2
EIF3DO15371 SMARCA1-205ENST00000617310 4291 ntTSL 210.71□□□□□ -0.693e-8■□□□□ 10.2
EIF3DO15371 AC005562.1-205ENST00000440026 1961 ntTSL 510.6□□□□□ -0.715e-6■□□□□ 10.2
EIF3DO15371 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.883e-8■□□□□ 10.2
EIF3DO15371 AC005562.1-202ENST00000398849 1411 ntTSL 29.27□□□□□ -0.935e-6■□□□□ 10.2
EIF3DO15371 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.973e-8■□□□□ 10.2
EIF3DO15371 AC005562.1-203ENST00000578265 704 ntTSL 36.84□□□□□ -1.315e-6■□□□□ 10.2
EIF3DO15371 AC005562.1-204ENST00000431308 805 ntTSL 55.75□□□□□ -1.495e-6■□□□□ 10.2
EIF3DO15371 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.854e-7■□□□□ 10.1
EIF3DO15371 KTN1-208ENST00000459737 4793 ntTSL 1 (best)2.59□□□□□ -1.994e-7■□□□□ 10.1
EIF3DO15371 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.074e-7■□□□□ 10.1
EIF3DO15371 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.094e-7■□□□□ 10.1
EIF3DO15371 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.48□□□□□ -2.174e-7■□□□□ 10.1
EIF3DO15371 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.892e-10■□□□□ 10.1
EIF3DO15371 NOP56-216ENST00000492135 1143 ntTSL 1 (best)15.55■□□□□ 0.082e-10■□□□□ 10.1
EIF3DO15371 NOP56-219ENST00000612233 2980 nt15.23■□□□□ 0.032e-10■□□□□ 10.1
EIF3DO15371 NOP56-220ENST00000616692 2662 ntTSL 1 (best)14.16□□□□□ -0.142e-10■□□□□ 10.1
EIF3DO15371 NOP56-206ENST00000466447 1094 ntTSL 212.77□□□□□ -0.372e-10■□□□□ 10.1
EIF3DO15371 NOP56-202ENST00000415272 1628 ntTSL 59.99□□□□□ -0.812e-10■□□□□ 10.1
EIF3DO15371 NOP56-207ENST00000467196 1320 ntTSL 59.12□□□□□ -0.952e-10■□□□□ 10.1
EIF3DO15371 KTN1-215ENST00000554567 730 ntTSL 528.23■■■□□ 2.117e-7■□□□□ 10.1
EIF3DO15371 PLXNB1-218ENST00000485535 3264 ntTSL 213.34□□□□□ -0.279e-7■□□□□ 10.1
EIF3DO15371 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.38■□□□□ 0.052e-9■□□□□ 10.1
EIF3DO15371 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.132e-10■□□□□ 10.1
EIF3DO15371 USP34-212ENST00000476716 606 ntTSL 44.23□□□□□ -1.735e-6■□□□□ 10.1
EIF3DO15371 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.52e-10■□□□□ 10.1
EIF3DO15371 RPS6KA3-206ENST00000492128 553 ntTSL 49.34□□□□□ -0.912e-10■□□□□ 10.1
EIF3DO15371 ACSS2-216ENST00000484354 517 ntTSL 524.47■■□□□ 1.513e-7■□□□□ 10.1
EIF3DO15371 ACSS2-205ENST00000467019 504 ntTSL 422.97■■□□□ 1.273e-7■□□□□ 10.1
EIF3DO15371 ACSS2-213ENST00000480978 844 ntTSL 222.66■■□□□ 1.223e-7■□□□□ 10.1
EIF3DO15371 ACSS2-222ENST00000493805 603 ntTSL 421.9■■□□□ 1.13e-7■□□□□ 10.1
EIF3DO15371 ACSS2-211ENST00000477932 2450 ntTSL 521.85■■□□□ 1.093e-7■□□□□ 10.1
EIF3DO15371 ACSS2-208ENST00000473172 665 ntTSL 321.48■■□□□ 1.033e-7■□□□□ 10.1
EIF3DO15371 NINL-206ENST00000489780 630 ntTSL 320.69■□□□□ 0.93e-7■□□□□ 10.1
EIF3DO15371 ACSS2-210ENST00000476922 1527 ntTSL 219.93■□□□□ 0.783e-7■□□□□ 10.1
EIF3DO15371 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.55■□□□□ 0.723e-7■□□□□ 10.1
EIF3DO15371 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.643e-7■□□□□ 10.1
EIF3DO15371 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.523e-7■□□□□ 10.1
EIF3DO15371 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.253e-7■□□□□ 10.1
EIF3DO15371 NINL-204ENST00000461642 594 ntTSL 316.34■□□□□ 0.213e-7■□□□□ 10.1
EIF3DO15371 ACSS2-215ENST00000481971 570 ntTSL 415.71■□□□□ 0.113e-7■□□□□ 10.1
EIF3DO15371 ACSS2-212ENST00000480274 567 ntTSL 514.87□□□□□ -0.033e-7■□□□□ 10.1
EIF3DO15371 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.54□□□□□ -0.086e-6■□□□□ 10.1
EIF3DO15371 ACSS2-209ENST00000475459 558 ntTSL 414□□□□□ -0.173e-7■□□□□ 10.1
EIF3DO15371 PLCG1-205ENST00000465571 543 ntTSL 211.58□□□□□ -0.563e-7■□□□□ 10.1
EIF3DO15371 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.693e-11■□□□□ 10.1
EIF3DO15371 ACSS2-214ENST00000481284 2851 ntTSL 210.66□□□□□ -0.73e-7■□□□□ 10.1
EIF3DO15371 ACSS2-217ENST00000488172 648 ntTSL 410.59□□□□□ -0.713e-7■□□□□ 10.1
EIF3DO15371 ACSS2-224ENST00000497927 580 ntTSL 410.59□□□□□ -0.713e-7■□□□□ 10.1
EIF3DO15371 ACSS2-204ENST00000464399 358 ntTSL 57.59□□□□□ -1.193e-7■□□□□ 10.1
EIF3DO15371 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.63■■□□□ 1.051e-12■□□□□ 10.1
EIF3DO15371 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.31■□□□□ 0.681e-12■□□□□ 10.1
EIF3DO15371 PNN-203ENST00000554117 624 ntTSL 211.56□□□□□ -0.561e-12■□□□□ 10.1
EIF3DO15371 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.11■■□□□ 1.293e-24■□□□□ 10.1
EIF3DO15371 H2AFX-201ENST00000375167 1373 ntTSL 217.87■□□□□ 0.453e-24■□□□□ 10.1
EIF3DO15371 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.593e-7■□□□□ 10.1
EIF3DO15371 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.593e-7■□□□□ 10.1
EIF3DO15371 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.593e-7■□□□□ 10.1
EIF3DO15371 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.152e-6■□□□□ 10
EIF3DO15371 ARHGEF10L-206ENST00000469726 4585 ntTSL 213.74□□□□□ -0.212e-6■□□□□ 10
EIF3DO15371 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC12.53□□□□□ -0.42e-6■□□□□ 10
EIF3DO15371 ARHGEF10L-204ENST00000375415 4035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.522e-6■□□□□ 10
EIF3DO15371 USP34-208ENST00000467128 531 ntTSL 49.14□□□□□ -0.957e-6■□□□□ 10
EIF3DO15371 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.282e-24■□□□□ 10
EIF3DO15371 HMGB2-205ENST00000511316 1841 ntTSL 213.8□□□□□ -0.22e-24■□□□□ 10
Retrieved 100 of 4,069 protein–RNA pairs in 24.5 ms