RNA–Protein interactions for RNA: ENST00000459737.5

KTN1-208, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 4,793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-208ENST00000459737 NISCHQ9Y2I1 1504 aa6.24□□□□□ -1.41
KTN1-208ENST00000459737 CCDC180Q9P1Z9 1646 aa5.96□□□□□ -1.46
KTN1-208ENST00000459737 UNC13AQ9UPW8 1703 aa5.96□□□□□ -1.46
KTN1-208ENST00000459737 AEBP2Q6ZN18 517 aaPredicted RBP5.75□□□□□ -1.49
KTN1-208ENST00000459737 BICRAQ9NZM4 1560 aa5.65□□□□□ -1.5
KTN1-208ENST00000459737 MYO15BQ96JP2 1530 aa5.55□□□□□ -1.52
KTN1-208ENST00000459737 CHIC1Q5VXU3 224 aa5.52□□□□□ -1.53
KTN1-208ENST00000459737 DCAF1Q9Y4B6 1507 aa5.44□□□□□ -1.54
KTN1-208ENST00000459737 ZCCHC6Q5VYS8 1495 aaKnown RBP5.29□□□□□ -1.56
KTN1-208ENST00000459737 NACADO15069 1562 aa5.29□□□□□ -1.56
KTN1-208ENST00000459737 SHROOM4Q9ULL8 1493 aa5.26□□□□□ -1.57
KTN1-208ENST00000459737 PEG3Q9GZU2 1588 aa5.25□□□□□ -1.57
KTN1-208ENST00000459737 SCRIBQ14160 1630 aa5.21□□□□□ -1.58
KTN1-208ENST00000459737 RB1CC1Q8TDY2 1594 aa5.19□□□□□ -1.58
KTN1-208ENST00000459737 DNAJC5BQ9UF47 199 aa5.19□□□□□ -1.58
KTN1-208ENST00000459737 PRDM2Q13029 1718 aa5.17□□□□□ -1.58
KTN1-208ENST00000459737 ABCC9O60706 1549 aa5.15□□□□□ -1.59
KTN1-208ENST00000459737 THOC2Q8NI27 1593 aaKnown RBP5.13□□□□□ -1.59
KTN1-208ENST00000459737 CC2D2AQ9P2K1 1620 aa5.12□□□□□ -1.59
KTN1-208ENST00000459737 EIF4G1Q04637 1599 aaKnown RBP5.11□□□□□ -1.59
KTN1-208ENST00000459737 SENP3Q9H4L4 574 aaPredicted RBP5.06□□□□□ -1.6
KTN1-208ENST00000459737 WDR97A6NE52 1622 aa5.02□□□□□ -1.61
KTN1-208ENST00000459737 KIF21AQ7Z4S6 1674 aa5.01□□□□□ -1.61
KTN1-208ENST00000459737 HMGXB3Q12766 1538 aa4.97□□□□□ -1.61
KTN1-208ENST00000459737 SMARCA4P51532 1647 aa4.97□□□□□ -1.61
KTN1-208ENST00000459737 PHF23Q9BUL5 403 aaPredicted RBP4.92□□□□□ -1.62
KTN1-208ENST00000459737 SMARCA2P51531 1590 aa4.88□□□□□ -1.63
KTN1-208ENST00000459737 NCAPD3P42695 1498 aa4.87□□□□□ -1.63
KTN1-208ENST00000459737 TARBP1Q13395 1621 aaKnown RBP4.86□□□□□ -1.63
KTN1-208ENST00000459737 WDR62O43379 1518 aa4.85□□□□□ -1.63
KTN1-208ENST00000459737 WIZO95785 1651 aa4.85□□□□□ -1.63
KTN1-208ENST00000459737 CECR2Q9BXF3 1484 aa4.82□□□□□ -1.64
KTN1-208ENST00000459737 MROH2BQ7Z745 1585 aa4.82□□□□□ -1.64
KTN1-208ENST00000459737 BAZ1AQ9NRL2 1556 aaPredicted RBP4.8□□□□□ -1.64
KTN1-208ENST00000459737 ATAD2BQ9ULI0 1458 aa4.79□□□□□ -1.64
KTN1-208ENST00000459737 LAMC3Q9Y6N6 1575 aa4.79□□□□□ -1.64
KTN1-208ENST00000459737 SHROOM2Q13796 1616 aa4.77□□□□□ -1.65
KTN1-208ENST00000459737 KIF13AQ9H1H9 1805 aa4.76□□□□□ -1.65
KTN1-208ENST00000459737 PPRC1Q5VV67 1664 aaKnown RBP4.74□□□□□ -1.65
KTN1-208ENST00000459737 CUX2O14529 1486 aa4.73□□□□□ -1.65
KTN1-208ENST00000459737 CLASP1Q7Z460 1538 aa4.72□□□□□ -1.65
KTN1-208ENST00000459737 ABCA5Q8WWZ7 1642 aa4.72□□□□□ -1.65
KTN1-208ENST00000459737 CHD1O14646 1710 aa4.71□□□□□ -1.65
KTN1-208ENST00000459737 NESP48681 1621 aa4.71□□□□□ -1.66
KTN1-208ENST00000459737 BIVM-ERCC5R4GMW8 1640 aa4.7□□□□□ -1.66
KTN1-208ENST00000459737 POTEDQ86YR6 584 aa4.69□□□□□ -1.66
KTN1-208ENST00000459737 PBRM1Q86U86 1689 aa4.69□□□□□ -1.66
KTN1-208ENST00000459737 URB2Q14146 1524 aaKnown RBP4.67□□□□□ -1.66
KTN1-208ENST00000459737 TOP2AP11388 1531 aaKnown RBP4.67□□□□□ -1.66
KTN1-208ENST00000459737 FOXD1Q16676 465 aa4.66□□□□□ -1.66
KTN1-208ENST00000459737 SIGLEC1Q9BZZ2 1709 aa4.66□□□□□ -1.66
KTN1-208ENST00000459737 CFTRP13569 1480 aa4.66□□□□□ -1.66
KTN1-208ENST00000459737 LRRIQ1Q96JM4 1722 aa4.65□□□□□ -1.67
KTN1-208ENST00000459737 EIF4G3O43432 1585 aaKnown RBP4.64□□□□□ -1.67
KTN1-208ENST00000459737 TOP2BQ02880 1626 aa4.63□□□□□ -1.67
KTN1-208ENST00000459737 RIMBP3CA6NJZ7 1639 aa4.63□□□□□ -1.67
KTN1-208ENST00000459737 RIMBP3BA6NNM3 1639 aa4.63□□□□□ -1.67
KTN1-208ENST00000459737 RIMBP3Q9UFD9 1639 aa4.63□□□□□ -1.67
KTN1-208ENST00000459737 RSF1Q96T23 1441 aaPredicted RBP4.56□□□□□ -1.68
KTN1-208ENST00000459737 CUX1P39880 1505 aa4.54□□□□□ -1.68
KTN1-208ENST00000459737 MSH5O43196 834 aa4.54□□□□□ -1.68
KTN1-208ENST00000459737 ERCC6L2Q5T890 1561 aa4.54□□□□□ -1.68
KTN1-208ENST00000459737 DNMBPQ6XZF7 1577 aa4.53□□□□□ -1.68
KTN1-208ENST00000459737 RUSC2Q8N2Y8 1516 aa4.52□□□□□ -1.69
KTN1-208ENST00000459737 CEP170Q5SW79 1584 aa4.52□□□□□ -1.69
KTN1-208ENST00000459737 SYNJ1O43426 1573 aa4.52□□□□□ -1.69
KTN1-208ENST00000459737 HRCP23327 699 aa4.5□□□□□ -1.69
KTN1-208ENST00000459737 CCDC88BA6NC98 1476 aa4.49□□□□□ -1.69
KTN1-208ENST00000459737 ZNF608Q9ULD9 1512 aaPredicted RBP4.49□□□□□ -1.69
KTN1-208ENST00000459737 ADAMTS12P58397 1594 aa4.49□□□□□ -1.69
KTN1-208ENST00000459737 PABPN1Q86U42 306 aaKnown RBP eCLIP4.48□□□□□ -1.69
KTN1-208ENST00000459737 TOPBP1Q92547 1522 aa4.48□□□□□ -1.69
KTN1-208ENST00000459737 MAP3K4Q9Y6R4 1608 aa4.47□□□□□ -1.69
KTN1-208ENST00000459737 MRC2Q9UBG0 1479 aa4.47□□□□□ -1.69
KTN1-208ENST00000459737 DNAJC5Q9H3Z4 198 aa4.47□□□□□ -1.69
KTN1-208ENST00000459737 ADCY10Q96PN6 1610 aa4.47□□□□□ -1.69
KTN1-208ENST00000459737 ARAP1Q96P48 1450 aa4.44□□□□□ -1.7
KTN1-208ENST00000459737 PPARGC1BQ86YN6 1023 aaKnown RBP4.44□□□□□ -1.7
KTN1-208ENST00000459737 BAZ1BQ9UIG0 1483 aaKnown RBP4.43□□□□□ -1.7
KTN1-208ENST00000459737 KDM5BQ9UGL1 1544 aa4.43□□□□□ -1.7
KTN1-208ENST00000459737 FRMPD1Q5SYB0 1578 aa4.43□□□□□ -1.7
KTN1-208ENST00000459737 POLA1P09884 1462 aaPredicted RBP4.42□□□□□ -1.7
KTN1-208ENST00000459737 ARHGEF11O15085 1522 aa4.42□□□□□ -1.7
KTN1-208ENST00000459737 CADPSQ9ULU8 1353 aa4.41□□□□□ -1.7
KTN1-208ENST00000459737 ABCA10Q8WWZ4 1543 aa4.4□□□□□ -1.7
KTN1-208ENST00000459737 CTTNBP2Q8WZ74 1663 aa4.4□□□□□ -1.71
KTN1-208ENST00000459737 FANCD2Q9BXW9 1451 aa4.39□□□□□ -1.71
KTN1-208ENST00000459737 DIP2BQ9P265 1576 aa4.39□□□□□ -1.71
KTN1-208ENST00000459737 PIAS4Q8N2W9 510 aaPredicted RBP4.39□□□□□ -1.71
KTN1-208ENST00000459737 NUP160Q12769 1436 aa4.39□□□□□ -1.71
KTN1-208ENST00000459737 SAMD9Q5K651 1589 aa4.38□□□□□ -1.71
KTN1-208ENST00000459737 RICTORQ6R327 1708 aa4.37□□□□□ -1.71
KTN1-208ENST00000459737 BCORL1Q5H9F3 1711 aa4.36□□□□□ -1.71
KTN1-208ENST00000459737 MAPKBP1O60336 1514 aa4.36□□□□□ -1.71
KTN1-208ENST00000459737 EP400Q96L91 3159 aa4.36□□□□□ -1.71
KTN1-208ENST00000459737 GLI2P10070 1586 aa4.35□□□□□ -1.71
KTN1-208ENST00000459737 ERICH3Q5RHP9 1530 aa4.34□□□□□ -1.71
KTN1-208ENST00000459737 UTRNP46939 3433 aa4.34□□□□□ -1.71
KTN1-208ENST00000459737 ABCC2Q92887 1545 aa4.34□□□□□ -1.72
KTN1-208ENST00000459737 SCAF1Q9H7N4 1312 aaKnown RBP4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms