RNA–Protein interactions for RNA: ENST00000530167.1

H2AFX-202, Transcript of H2A histone family member X, humanhuman

APPRIS P1 BASIC

Gene H2AFX, Length 1,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-202ENST00000530167 NISCHQ9Y2I1 1504 aa49.87■■■■■ 5.57
H2AFX-202ENST00000530167 CCDC180Q9P1Z9 1646 aa44.04■■■■■ 4.64
H2AFX-202ENST00000530167 ABCC9O60706 1549 aa42.55■■■■■ 4.4
H2AFX-202ENST00000530167 ZCCHC6Q5VYS8 1495 aaKnown RBP41.68■■■■■ 4.26
H2AFX-202ENST00000530167 DCAF8L2P0C7V8 631 aa41.52■■■■■ 4.24
H2AFX-202ENST00000530167 DCAF1Q9Y4B6 1507 aa41.26■■■■■ 4.19
H2AFX-202ENST00000530167 NACADO15069 1562 aa41.25■■■■■ 4.19
H2AFX-202ENST00000530167 MYO15BQ96JP2 1530 aa41.18■■■■■ 4.18
H2AFX-202ENST00000530167 RB1CC1Q8TDY2 1594 aa41.16■■■■■ 4.18
H2AFX-202ENST00000530167 SCRIBQ14160 1630 aa40.3■■■■■ 4.04
H2AFX-202ENST00000530167 UNC13AQ9UPW8 1703 aa40.26■■■■■ 4.04
H2AFX-202ENST00000530167 BICRAQ9NZM4 1560 aa39.89■■■■□ 3.98
H2AFX-202ENST00000530167 PABPN1Q86U42 306 aaKnown RBP eCLIP39.89■■■■□ 3.98
H2AFX-202ENST00000530167 SHROOM4Q9ULL8 1493 aa39.89■■■■□ 3.98
H2AFX-202ENST00000530167 CECR2Q9BXF3 1484 aa38.81■■■■□ 3.8
H2AFX-202ENST00000530167 EIF4G1Q04637 1599 aaKnown RBP38.8■■■■□ 3.8
H2AFX-202ENST00000530167 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
H2AFX-202ENST00000530167 SMARCA4P51532 1647 aa38.57■■■■□ 3.77
H2AFX-202ENST00000530167 CC2D2AQ9P2K1 1620 aa38.49■■■■□ 3.75
H2AFX-202ENST00000530167 MROH2BQ7Z745 1585 aa38.47■■■■□ 3.75
H2AFX-202ENST00000530167 DNAJC5BQ9UF47 199 aa38.46■■■■□ 3.75
H2AFX-202ENST00000530167 RSF1Q96T23 1441 aaPredicted RBP38.25■■■■□ 3.71
H2AFX-202ENST00000530167 ATAD2BQ9ULI0 1458 aa38.2■■■■□ 3.71
H2AFX-202ENST00000530167 SMARCA2P51531 1590 aa38.17■■■■□ 3.7
H2AFX-202ENST00000530167 PEG3Q9GZU2 1588 aa38.15■■■■□ 3.7
H2AFX-202ENST00000530167 WIZO95785 1651 aa38.11■■■■□ 3.69
H2AFX-202ENST00000530167 NCAPD3P42695 1498 aa38.06■■■■□ 3.68
H2AFX-202ENST00000530167 BAZ1BQ9UIG0 1483 aaKnown RBP37.93■■■■□ 3.66
H2AFX-202ENST00000530167 HMGXB3Q12766 1538 aa37.93■■■■□ 3.66
H2AFX-202ENST00000530167 SUPT5HO00267 1087 aaKnown RBP37.86■■■■□ 3.65
H2AFX-202ENST00000530167 TOP2AP11388 1531 aaKnown RBP37.71■■■■□ 3.63
H2AFX-202ENST00000530167 CCDC88BA6NC98 1476 aa37.28■■■■□ 3.56
H2AFX-202ENST00000530167 CADPSQ9ULU8 1353 aa37.01■■■■□ 3.52
H2AFX-202ENST00000530167 NESP48681 1621 aa37.01■■■■□ 3.51
H2AFX-202ENST00000530167 LAMC3Q9Y6N6 1575 aa36.97■■■■□ 3.51
H2AFX-202ENST00000530167 CFTRP13569 1480 aa36.92■■■■□ 3.5
H2AFX-202ENST00000530167 PDS5BQ9NTI5 1447 aa36.7■■■■□ 3.47
H2AFX-202ENST00000530167 PRDM2Q13029 1718 aa36.69■■■■□ 3.46
H2AFX-202ENST00000530167 ERCC6Q03468 1493 aa36.62■■■■□ 3.45
H2AFX-202ENST00000530167 FANCD2Q9BXW9 1451 aa36.6■■■■□ 3.45
H2AFX-202ENST00000530167 KIF21AQ7Z4S6 1674 aa36.58■■■■□ 3.45
H2AFX-202ENST00000530167 CEP164Q9UPV0 1460 aa36.48■■■■□ 3.43
H2AFX-202ENST00000530167 MRC2Q9UBG0 1479 aa36.29■■■■□ 3.4
H2AFX-202ENST00000530167 THOC2Q8NI27 1593 aaKnown RBP36.27■■■■□ 3.4
H2AFX-202ENST00000530167 URB2Q14146 1524 aaKnown RBP36.18■■■■□ 3.38
H2AFX-202ENST00000530167 ABCC8Q09428 1581 aa36.15■■■■□ 3.38
H2AFX-202ENST00000530167 WDR62O43379 1518 aa36.14■■■■□ 3.38
H2AFX-202ENST00000530167 DNMBPQ6XZF7 1577 aa36.08■■■■□ 3.37
H2AFX-202ENST00000530167 TOPBP1Q92547 1522 aa36.08■■■■□ 3.37
H2AFX-202ENST00000530167 WRNQ14191 1432 aaPredicted RBP eCLIP36.06■■■■□ 3.36
H2AFX-202ENST00000530167 CUX1P39880 1505 aa36.05■■■■□ 3.36
H2AFX-202ENST00000530167 CUX2O14529 1486 aa35.95■■■■□ 3.34
H2AFX-202ENST00000530167 SYNJ1O43426 1573 aa35.94■■■■□ 3.34
H2AFX-202ENST00000530167 TOP2BQ02880 1626 aa35.9■■■■□ 3.34
H2AFX-202ENST00000530167 BIVM-ERCC5R4GMW8 1640 aa35.88■■■■□ 3.34
H2AFX-202ENST00000530167 FGD5Q6ZNL6 1462 aa35.84■■■■□ 3.33
H2AFX-202ENST00000530167 POLA1P09884 1462 aaPredicted RBP35.82■■■■□ 3.32
H2AFX-202ENST00000530167 TRIM41Q8WV44 630 aa35.7■■■■□ 3.31
H2AFX-202ENST00000530167 SOGA1O94964 1423 aa35.7■■■■□ 3.31
H2AFX-202ENST00000530167 RAD54L2Q9Y4B4 1467 aa35.68■■■■□ 3.3
H2AFX-202ENST00000530167 IFT140Q96RY7 1462 aa35.67■■■■□ 3.3
H2AFX-202ENST00000530167 CHIC1Q5VXU3 224 aa35.67■■■■□ 3.3
H2AFX-202ENST00000530167 TARBP1Q13395 1621 aaKnown RBP35.62■■■■□ 3.29
H2AFX-202ENST00000530167 ABCA10Q8WWZ4 1543 aa35.5■■■■□ 3.27
H2AFX-202ENST00000530167 ZNF608Q9ULD9 1512 aaPredicted RBP35.5■■■■□ 3.27
H2AFX-202ENST00000530167 WDR97A6NE52 1622 aa35.48■■■■□ 3.27
H2AFX-202ENST00000530167 TDRD9Q8NDG6 1382 aaKnown RBP35.43■■■■□ 3.26
H2AFX-202ENST00000530167 AQRO60306 1485 aaKnown RBP eCLIP35.38■■■■□ 3.257e-6■□□□□ 9.9
H2AFX-202ENST00000530167 EIF4G3O43432 1585 aaKnown RBP35.37■■■■□ 3.25
H2AFX-202ENST00000530167 ABCA5Q8WWZ7 1642 aa35.3■■■■□ 3.24
H2AFX-202ENST00000530167 GAPVD1Q14C86 1478 aa35.29■■■■□ 3.24
H2AFX-202ENST00000530167 KIF27Q86VH2 1401 aa35.26■■■■□ 3.23
H2AFX-202ENST00000530167 GRIN2BQ13224 1484 aa35.18■■■■□ 3.22
H2AFX-202ENST00000530167 PBRM1Q86U86 1689 aa35.18■■■■□ 3.22
H2AFX-202ENST00000530167 RUSC2Q8N2Y8 1516 aa35.17■■■■□ 3.22
H2AFX-202ENST00000530167 ERICH3Q5RHP9 1530 aa35.08■■■■□ 3.21
H2AFX-202ENST00000530167 SNAPC4Q5SXM2 1469 aa35.06■■■■□ 3.2
H2AFX-202ENST00000530167 IGF1RP08069 1367 aa35.03■■■■□ 3.2
H2AFX-202ENST00000530167 MAGI1Q96QZ7 1491 aaPredicted RBP35.01■■■■□ 3.2
H2AFX-202ENST00000530167 FAM9AQ8IZU1 332 aaPredicted RBP34.99■■■■□ 3.19
H2AFX-202ENST00000530167 EEA1Q15075 1411 aa34.98■■■■□ 3.19
H2AFX-202ENST00000530167 ADAMTS12P58397 1594 aa34.92■■■■□ 3.18
H2AFX-202ENST00000530167 CUL7Q14999 1698 aa34.9■■■■□ 3.18
H2AFX-202ENST00000530167 FHAD1B1AJZ9 1412 aa34.89■■■■□ 3.18
H2AFX-202ENST00000530167 CSRNP3Q8WYN3 585 aa34.88■■■■□ 3.17
H2AFX-202ENST00000530167 FBLN2P98095 1184 aa34.88■■■■□ 3.17
H2AFX-202ENST00000530167 SYNJ2O15056 1496 aa34.87■■■■□ 3.17
H2AFX-202ENST00000530167 CHMP7Q8WUX9 453 aaPredicted RBP34.85■■■■□ 3.17
H2AFX-202ENST00000530167 CARMIL1Q5VZK9 1371 aa34.85■■■■□ 3.17
H2AFX-202ENST00000530167 CHD1O14646 1710 aa34.82■■■■□ 3.16
H2AFX-202ENST00000530167 GRIN2AQ12879 1464 aa34.73■■■■□ 3.15
H2AFX-202ENST00000530167 PRXQ9BXM0 1461 aa34.73■■■■□ 3.15
H2AFX-202ENST00000530167 RAPGEF2Q9Y4G8 1499 aa34.7■■■■□ 3.15
H2AFX-202ENST00000530167 OSCARQ8IYS5 282 aa34.62■■■■□ 3.13
H2AFX-202ENST00000530167 KIF21BO75037 1637 aa34.59■■■■□ 3.13
H2AFX-202ENST00000530167 CEP170Q5SW79 1584 aa34.55■■■■□ 3.12
H2AFX-202ENST00000530167 NUP160Q12769 1436 aa34.54■■■■□ 3.12
H2AFX-202ENST00000530167 EHMT2Q96KQ7 1210 aa34.52■■■■□ 3.12
H2AFX-202ENST00000530167 GOLGA3Q08378 1498 aa34.45■■■■□ 3.1
H2AFX-202ENST00000530167 CLASP1Q7Z460 1538 aa34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms