RNA–Protein interactions for RNA: ENST00000485535.5

PLXNB1-218, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 3,264 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-218ENST00000485535 NISCHQ9Y2I1 1504 aa25.26■■□□□ 1.63
PLXNB1-218ENST00000485535 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
PLXNB1-218ENST00000485535 SHROOM4Q9ULL8 1493 aa21.4■■□□□ 1.02
PLXNB1-218ENST00000485535 SUPT5HO00267 1087 aaKnown RBP21.2■□□□□ 0.98
PLXNB1-218ENST00000485535 ABCC9O60706 1549 aa21.2■□□□□ 0.98
PLXNB1-218ENST00000485535 ZCCHC6Q5VYS8 1495 aaKnown RBP21.15■□□□□ 0.98
PLXNB1-218ENST00000485535 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
PLXNB1-218ENST00000485535 DCAF1Q9Y4B6 1507 aa20.87■□□□□ 0.93
PLXNB1-218ENST00000485535 MYO15BQ96JP2 1530 aa20.72■□□□□ 0.91
PLXNB1-218ENST00000485535 NACADO15069 1562 aa20.69■□□□□ 0.9
PLXNB1-218ENST00000485535 RB1CC1Q8TDY2 1594 aa20.58■□□□□ 0.89
PLXNB1-218ENST00000485535 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
PLXNB1-218ENST00000485535 HRCP23327 699 aa20.45■□□□□ 0.86
PLXNB1-218ENST00000485535 PCGF6Q9BYE7 350 aa20.39■□□□□ 0.86
PLXNB1-218ENST00000485535 SCRIBQ14160 1630 aa20.33■□□□□ 0.84
PLXNB1-218ENST00000485535 UNC13AQ9UPW8 1703 aa20.11■□□□□ 0.81
PLXNB1-218ENST00000485535 PPARGC1BQ86YN6 1023 aaKnown RBP20.06■□□□□ 0.8
PLXNB1-218ENST00000485535 LOC105371045A0A1W2PR82 267 aa20.04■□□□□ 0.8
PLXNB1-218ENST00000485535 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.792e-7■■□□□ 13.5
PLXNB1-218ENST00000485535 BICRAQ9NZM4 1560 aa19.93■□□□□ 0.78
PLXNB1-218ENST00000485535 TRIM26Q12899 539 aaPredicted RBP19.82■□□□□ 0.76
PLXNB1-218ENST00000485535 TRIM41Q8WV44 630 aa19.66■□□□□ 0.74
PLXNB1-218ENST00000485535 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
PLXNB1-218ENST00000485535 FAM9AQ8IZU1 332 aaPredicted RBP19.64■□□□□ 0.73
PLXNB1-218ENST00000485535 EHMT2Q96KQ7 1210 aa19.59■□□□□ 0.73
PLXNB1-218ENST00000485535 ZEB1P37275 1124 aaPredicted RBP19.57■□□□□ 0.72
PLXNB1-218ENST00000485535 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
PLXNB1-218ENST00000485535 RSF1Q96T23 1441 aaPredicted RBP19.5■□□□□ 0.71
PLXNB1-218ENST00000485535 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
PLXNB1-218ENST00000485535 SMARCA4P51532 1647 aa19.46■□□□□ 0.71
PLXNB1-218ENST00000485535 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
PLXNB1-218ENST00000485535 WIZO95785 1651 aa19.32■□□□□ 0.68
PLXNB1-218ENST00000485535 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
PLXNB1-218ENST00000485535 PEG3Q9GZU2 1588 aa19.22■□□□□ 0.67
PLXNB1-218ENST00000485535 SMARCA2P51531 1590 aa19.21■□□□□ 0.67
PLXNB1-218ENST00000485535 CC2D2AQ9P2K1 1620 aa19.15■□□□□ 0.66
PLXNB1-218ENST00000485535 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
PLXNB1-218ENST00000485535 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
PLXNB1-218ENST00000485535 CCER1Q8TC90 406 aaPredicted RBP19.12■□□□□ 0.65
PLXNB1-218ENST00000485535 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
PLXNB1-218ENST00000485535 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
PLXNB1-218ENST00000485535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
PLXNB1-218ENST00000485535 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
PLXNB1-218ENST00000485535 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
PLXNB1-218ENST00000485535 TTBK1Q5TCY1 1321 aaPredicted RBP19.02■□□□□ 0.64
PLXNB1-218ENST00000485535 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
PLXNB1-218ENST00000485535 DNAJC5BQ9UF47 199 aa18.93■□□□□ 0.62
PLXNB1-218ENST00000485535 CENPBP07199 599 aaPredicted RBP18.82■□□□□ 0.6
PLXNB1-218ENST00000485535 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
PLXNB1-218ENST00000485535 ACIN1Q9UKV3 1341 aaKnown RBP18.8■□□□□ 0.6
PLXNB1-218ENST00000485535 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.6
PLXNB1-218ENST00000485535 NEUROD1Q13562 356 aa18.74■□□□□ 0.59
PLXNB1-218ENST00000485535 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
PLXNB1-218ENST00000485535 CEP162Q5TB80 1403 aa18.67■□□□□ 0.58
PLXNB1-218ENST00000485535 ABCC8Q09428 1581 aa18.66■□□□□ 0.58
PLXNB1-218ENST00000485535 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
PLXNB1-218ENST00000485535 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
PLXNB1-218ENST00000485535 CFTRP13569 1480 aa18.6■□□□□ 0.57
PLXNB1-218ENST00000485535 SOGA1O94964 1423 aa18.58■□□□□ 0.57
PLXNB1-218ENST00000485535 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.56
PLXNB1-218ENST00000485535 TNIKQ9UKE5 1360 aa18.57■□□□□ 0.56
PLXNB1-218ENST00000485535 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
PLXNB1-218ENST00000485535 ZNF316A6NFI3 1004 aaPredicted RBP18.55■□□□□ 0.56
PLXNB1-218ENST00000485535 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
PLXNB1-218ENST00000485535 NESP48681 1621 aa18.51■□□□□ 0.55
PLXNB1-218ENST00000485535 APLP2Q06481 763 aa18.5■□□□□ 0.55
PLXNB1-218ENST00000485535 EEA1Q15075 1411 aa18.5■□□□□ 0.55
PLXNB1-218ENST00000485535 LAMC3Q9Y6N6 1575 aa18.49■□□□□ 0.55
PLXNB1-218ENST00000485535 PRDM2Q13029 1718 aa18.46■□□□□ 0.55
PLXNB1-218ENST00000485535 RANGAP1P46060 587 aaPredicted RBP18.45■□□□□ 0.54
PLXNB1-218ENST00000485535 GOLGA3Q08378 1498 aa18.44■□□□□ 0.54
PLXNB1-218ENST00000485535 RUSC2Q8N2Y8 1516 aa18.44■□□□□ 0.54
PLXNB1-218ENST00000485535 FANCD2Q9BXW9 1451 aa18.4■□□□□ 0.54
PLXNB1-218ENST00000485535 PDS5BQ9NTI5 1447 aa18.39■□□□□ 0.53
PLXNB1-218ENST00000485535 MIER1Q8N108 512 aa18.32■□□□□ 0.52
PLXNB1-218ENST00000485535 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
PLXNB1-218ENST00000485535 CLIP1P30622 1438 aa18.3■□□□□ 0.52
PLXNB1-218ENST00000485535 SYNJ1O43426 1573 aa18.28■□□□□ 0.52
PLXNB1-218ENST00000485535 KIF21AQ7Z4S6 1674 aa18.27■□□□□ 0.51
PLXNB1-218ENST00000485535 MYT1Q01538 1121 aa18.25■□□□□ 0.51
PLXNB1-218ENST00000485535 CUX1P39880 1505 aa18.25■□□□□ 0.51
PLXNB1-218ENST00000485535 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
PLXNB1-218ENST00000485535 ERCC6Q03468 1493 aa18.22■□□□□ 0.51
PLXNB1-218ENST00000485535 BIVM-ERCC5R4GMW8 1640 aa18.21■□□□□ 0.51
PLXNB1-218ENST00000485535 VPS8Q8N3P4 1428 aa18.18■□□□□ 0.5
PLXNB1-218ENST00000485535 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
PLXNB1-218ENST00000485535 URB2Q14146 1524 aaKnown RBP18.16■□□□□ 0.5
PLXNB1-218ENST00000485535 TOPBP1Q92547 1522 aa18.16■□□□□ 0.5
PLXNB1-218ENST00000485535 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
PLXNB1-218ENST00000485535 KIF21BO75037 1637 aa18.11■□□□□ 0.49
PLXNB1-218ENST00000485535 FGD5Q6ZNL6 1462 aa18.1■□□□□ 0.49
PLXNB1-218ENST00000485535 RAPGEF2Q9Y4G8 1499 aa18.09■□□□□ 0.49
PLXNB1-218ENST00000485535 POLA1P09884 1462 aaPredicted RBP18.05■□□□□ 0.48
PLXNB1-218ENST00000485535 WDR62O43379 1518 aa18.03■□□□□ 0.48
PLXNB1-218ENST00000485535 THOC2Q8NI27 1593 aaKnown RBP18.02■□□□□ 0.48
PLXNB1-218ENST00000485535 ITGAEP38570 1179 aa18.01■□□□□ 0.47
PLXNB1-218ENST00000485535 RAD54L2Q9Y4B4 1467 aa18■□□□□ 0.47
PLXNB1-218ENST00000485535 CLSPNQ9HAW4 1339 aa17.97■□□□□ 0.47
PLXNB1-218ENST00000485535 CUX2O14529 1486 aa17.96■□□□□ 0.47
PLXNB1-218ENST00000485535 KIF27Q86VH2 1401 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms