RNA–Protein interactions for RNA: ENST00000558233.1

IPO4-205, Transcript of importin 4, humanhuman

TSL 5

Gene IPO4, Length 1,015 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-205ENST00000558233 NISCHQ9Y2I1 1504 aa37.58■■■■□ 3.61
IPO4-205ENST00000558233 ABCC9O60706 1549 aa33.63■■■□□ 2.97
IPO4-205ENST00000558233 CCDC180Q9P1Z9 1646 aa33.53■■■□□ 2.96
IPO4-205ENST00000558233 RB1CC1Q8TDY2 1594 aa31.96■■■□□ 2.71
IPO4-205ENST00000558233 NACADO15069 1562 aa31.7■■■□□ 2.67
IPO4-205ENST00000558233 DCAF8L2P0C7V8 631 aa31.58■■■□□ 2.65
IPO4-205ENST00000558233 DNAJC5BQ9UF47 199 aa31.58■■■□□ 2.65
IPO4-205ENST00000558233 ZCCHC6Q5VYS8 1495 aaKnown RBP31.36■■■□□ 2.61
IPO4-205ENST00000558233 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.61e-6■■■■□ 20.8
IPO4-205ENST00000558233 UNC13AQ9UPW8 1703 aa31.26■■■□□ 2.59
IPO4-205ENST00000558233 MYO15BQ96JP2 1530 aa31.2■■■□□ 2.59
IPO4-205ENST00000558233 DCAF1Q9Y4B6 1507 aa31.14■■■□□ 2.57
IPO4-205ENST00000558233 BICRAQ9NZM4 1560 aa31■■■□□ 2.55
IPO4-205ENST00000558233 SCRIBQ14160 1630 aa30.57■■■□□ 2.48
IPO4-205ENST00000558233 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
IPO4-205ENST00000558233 CC2D2AQ9P2K1 1620 aa30.36■■■□□ 2.45
IPO4-205ENST00000558233 CECR2Q9BXF3 1484 aa30.29■■■□□ 2.44
IPO4-205ENST00000558233 EIF4G1Q04637 1599 aaKnown RBP30.27■■■□□ 2.44
IPO4-205ENST00000558233 NCAPD3P42695 1498 aa29.25■■■□□ 2.27
IPO4-205ENST00000558233 SMARCA4P51532 1647 aa29.17■■■□□ 2.26
IPO4-205ENST00000558233 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
IPO4-205ENST00000558233 BAZ1AQ9NRL2 1556 aaPredicted RBP29.15■■■□□ 2.26
IPO4-205ENST00000558233 SMARCA2P51531 1590 aa29.09■■■□□ 2.25
IPO4-205ENST00000558233 DNAJC5Q9H3Z4 198 aa29.07■■■□□ 2.24
IPO4-205ENST00000558233 ERCC6Q03468 1493 aa29.05■■■□□ 2.24
IPO4-205ENST00000558233 HMGXB3Q12766 1538 aa29.04■■■□□ 2.24
IPO4-205ENST00000558233 CUX2O14529 1486 aa28.99■■■□□ 2.23
IPO4-205ENST00000558233 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
IPO4-205ENST00000558233 BAZ1BQ9UIG0 1483 aaKnown RBP28.9■■■□□ 2.22
IPO4-205ENST00000558233 PEG3Q9GZU2 1588 aa28.88■■■□□ 2.21
IPO4-205ENST00000558233 NESP48681 1621 aa28.85■■■□□ 2.21
IPO4-205ENST00000558233 WIZO95785 1651 aa28.7■■■□□ 2.18
IPO4-205ENST00000558233 RSF1Q96T23 1441 aaPredicted RBP28.66■■■□□ 2.18
IPO4-205ENST00000558233 LAMC3Q9Y6N6 1575 aa28.63■■■□□ 2.17
IPO4-205ENST00000558233 THOC2Q8NI27 1593 aaKnown RBP28.58■■■□□ 2.17
IPO4-205ENST00000558233 KIF21AQ7Z4S6 1674 aa28.5■■■□□ 2.15
IPO4-205ENST00000558233 PDS5BQ9NTI5 1447 aa28.47■■■□□ 2.15
IPO4-205ENST00000558233 TOP2AP11388 1531 aaKnown RBP28.4■■■□□ 2.14
IPO4-205ENST00000558233 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
IPO4-205ENST00000558233 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
IPO4-205ENST00000558233 WDR62O43379 1518 aa28.16■■■□□ 2.1
IPO4-205ENST00000558233 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
IPO4-205ENST00000558233 FANCD2Q9BXW9 1451 aa28.06■■■□□ 2.08
IPO4-205ENST00000558233 CFTRP13569 1480 aa28.02■■■□□ 2.08
IPO4-205ENST00000558233 CCDC88BA6NC98 1476 aa28.01■■■□□ 2.07
IPO4-205ENST00000558233 SUPT5HO00267 1087 aaKnown RBP27.99■■■□□ 2.07
IPO4-205ENST00000558233 PRDM2Q13029 1718 aa27.87■■■□□ 2.05
IPO4-205ENST00000558233 URB2Q14146 1524 aaKnown RBP27.83■■■□□ 2.05
IPO4-205ENST00000558233 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
IPO4-205ENST00000558233 OSCARQ8IYS5 282 aa27.67■■■□□ 2.02
IPO4-205ENST00000558233 IFT140Q96RY7 1462 aa27.55■■■□□ 2
IPO4-205ENST00000558233 TOPBP1Q92547 1522 aa27.52■■■□□ 2
IPO4-205ENST00000558233 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
IPO4-205ENST00000558233 ABCC8Q09428 1581 aa27.45■■□□□ 1.99
IPO4-205ENST00000558233 DNMBPQ6XZF7 1577 aa27.42■■□□□ 1.98
IPO4-205ENST00000558233 EIF4G3O43432 1585 aaKnown RBP27.37■■□□□ 1.97
IPO4-205ENST00000558233 RIMBP3CA6NJZ7 1639 aa27.34■■□□□ 1.97
IPO4-205ENST00000558233 RIMBP3BA6NNM3 1639 aa27.34■■□□□ 1.97
IPO4-205ENST00000558233 RIMBP3Q9UFD9 1639 aa27.34■■□□□ 1.97
IPO4-205ENST00000558233 TARBP1Q13395 1621 aaKnown RBP27.27■■□□□ 1.96
IPO4-205ENST00000558233 AQRO60306 1485 aaKnown RBP eCLIP27.25■■□□□ 1.953e-7■■■■■ 29.2
IPO4-205ENST00000558233 POLA1P09884 1462 aaPredicted RBP27.23■■□□□ 1.95
IPO4-205ENST00000558233 ARHGEF11O15085 1522 aa27.22■■□□□ 1.95
IPO4-205ENST00000558233 CHD1O14646 1710 aa27.21■■□□□ 1.95
IPO4-205ENST00000558233 CUX1P39880 1505 aa27.17■■□□□ 1.94
IPO4-205ENST00000558233 RAD54L2Q9Y4B4 1467 aa27.14■■□□□ 1.94
IPO4-205ENST00000558233 FBLN2P98095 1184 aa27.13■■□□□ 1.93
IPO4-205ENST00000558233 SOGA1O94964 1423 aa27.11■■□□□ 1.93
IPO4-205ENST00000558233 TDRD9Q8NDG6 1382 aaKnown RBP27.08■■□□□ 1.93
IPO4-205ENST00000558233 FGD5Q6ZNL6 1462 aa27.06■■□□□ 1.92
IPO4-205ENST00000558233 CYB5RLQ6IPT4 315 aa27.04■■□□□ 1.92
IPO4-205ENST00000558233 WRNQ14191 1432 aaPredicted RBP eCLIP27.04■■□□□ 1.92
IPO4-205ENST00000558233 BIVM-ERCC5R4GMW8 1640 aa27.04■■□□□ 1.92
IPO4-205ENST00000558233 TOP2BQ02880 1626 aa27.01■■□□□ 1.92
IPO4-205ENST00000558233 SYNJ1O43426 1573 aa27.01■■□□□ 1.91
IPO4-205ENST00000558233 WDR97A6NE52 1622 aa26.99■■□□□ 1.91
IPO4-205ENST00000558233 SNAPC4Q5SXM2 1469 aa26.98■■□□□ 1.91
IPO4-205ENST00000558233 ARAP1Q96P48 1450 aa26.94■■□□□ 1.9
IPO4-205ENST00000558233 MAGI1Q96QZ7 1491 aaPredicted RBP26.89■■□□□ 1.9
IPO4-205ENST00000558233 CHMP7Q8WUX9 453 aaPredicted RBP26.89■■□□□ 1.9
IPO4-205ENST00000558233 GRIN2BQ13224 1484 aa26.88■■□□□ 1.89
IPO4-205ENST00000558233 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
IPO4-205ENST00000558233 PBRM1Q86U86 1689 aa26.81■■□□□ 1.88
IPO4-205ENST00000558233 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
IPO4-205ENST00000558233 TRHP20396 242 aaPredicted RBP26.8■■□□□ 1.88
IPO4-205ENST00000558233 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
IPO4-205ENST00000558233 GAPVD1Q14C86 1478 aa26.78■■□□□ 1.88
IPO4-205ENST00000558233 ABCA5Q8WWZ7 1642 aa26.73■■□□□ 1.87
IPO4-205ENST00000558233 GRIN2AQ12879 1464 aa26.55■■□□□ 1.84
IPO4-205ENST00000558233 ADAMTS12P58397 1594 aa26.53■■□□□ 1.84
IPO4-205ENST00000558233 ERICH3Q5RHP9 1530 aa26.5■■□□□ 1.83
IPO4-205ENST00000558233 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
IPO4-205ENST00000558233 KIF27Q86VH2 1401 aa26.45■■□□□ 1.82
IPO4-205ENST00000558233 FHAD1B1AJZ9 1412 aa26.44■■□□□ 1.82
IPO4-205ENST00000558233 NUP160Q12769 1436 aa26.44■■□□□ 1.82
IPO4-205ENST00000558233 ERCC6L2Q5T890 1561 aa26.44■■□□□ 1.82
IPO4-205ENST00000558233 SHROOM2Q13796 1616 aa26.34■■□□□ 1.81
IPO4-205ENST00000558233 CUL7Q14999 1698 aa26.34■■□□□ 1.81
IPO4-205ENST00000558233 IGF1RP08069 1367 aa26.28■■□□□ 1.8
IPO4-205ENST00000558233 RUSC2Q8N2Y8 1516 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms