RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 NISCHQ9Y2I1 1504 aa45.34■■■■■ 4.85
H2AFX-201ENST00000375167 ABCC9O60706 1549 aa42.48■■■■■ 4.39
H2AFX-201ENST00000375167 CCDC180Q9P1Z9 1646 aa41.33■■■■■ 4.21
H2AFX-201ENST00000375167 DNAJC5BQ9UF47 199 aa40.84■■■■■ 4.13
H2AFX-201ENST00000375167 RB1CC1Q8TDY2 1594 aa39.94■■■■□ 3.98
H2AFX-201ENST00000375167 NACADO15069 1562 aa39.33■■■■□ 3.89
H2AFX-201ENST00000375167 PABPN1Q86U42 306 aaKnown RBP eCLIP39.27■■■■□ 3.88
H2AFX-201ENST00000375167 UNC13AQ9UPW8 1703 aa39.02■■■■□ 3.84
H2AFX-201ENST00000375167 DCAF8L2P0C7V8 631 aa38.76■■■■□ 3.8
H2AFX-201ENST00000375167 BICRAQ9NZM4 1560 aa38.76■■■■□ 3.79
H2AFX-201ENST00000375167 DNAJC5Q9H3Z4 198 aa38.51■■■■□ 3.76
H2AFX-201ENST00000375167 CECR2Q9BXF3 1484 aa38.42■■■■□ 3.74
H2AFX-201ENST00000375167 MYO15BQ96JP2 1530 aa38.36■■■■□ 3.73
H2AFX-201ENST00000375167 CC2D2AQ9P2K1 1620 aa38.33■■■■□ 3.73
H2AFX-201ENST00000375167 SHROOM4Q9ULL8 1493 aa38.19■■■■□ 3.7
H2AFX-201ENST00000375167 EIF4G1Q04637 1599 aaKnown RBP37.94■■■■□ 3.66
H2AFX-201ENST00000375167 SCRIBQ14160 1630 aa37.53■■■■□ 3.6
H2AFX-201ENST00000375167 DCAF1Q9Y4B6 1507 aa37.4■■■■□ 3.58
H2AFX-201ENST00000375167 ZCCHC6Q5VYS8 1495 aaKnown RBP37.32■■■■□ 3.56
H2AFX-201ENST00000375167 CUX2O14529 1486 aa37.18■■■■□ 3.54
H2AFX-201ENST00000375167 ERCC6Q03468 1493 aa36.83■■■■□ 3.49
H2AFX-201ENST00000375167 TRIM41Q8WV44 630 aa36.33■■■■□ 3.41
H2AFX-201ENST00000375167 NCAPD3P42695 1498 aa36.28■■■■□ 3.4
H2AFX-201ENST00000375167 NESP48681 1621 aa36.1■■■■□ 3.37
H2AFX-201ENST00000375167 THOC2Q8NI27 1593 aaKnown RBP36.06■■■■□ 3.36
H2AFX-201ENST00000375167 ATAD2BQ9ULI0 1458 aa35.98■■■■□ 3.35
H2AFX-201ENST00000375167 HMGXB3Q12766 1538 aa35.96■■■■□ 3.35
H2AFX-201ENST00000375167 SMARCA2P51531 1590 aa35.88■■■■□ 3.33
H2AFX-201ENST00000375167 LAMC3Q9Y6N6 1575 aa35.72■■■■□ 3.31
H2AFX-201ENST00000375167 SMARCA4P51532 1647 aa35.68■■■■□ 3.3
H2AFX-201ENST00000375167 KIF21AQ7Z4S6 1674 aa35.67■■■■□ 3.3
H2AFX-201ENST00000375167 BAZ1BQ9UIG0 1483 aaKnown RBP35.62■■■■□ 3.29
H2AFX-201ENST00000375167 PDS5BQ9NTI5 1447 aa35.54■■■■□ 3.28
H2AFX-201ENST00000375167 BAZ1AQ9NRL2 1556 aaPredicted RBP35.41■■■■□ 3.26
H2AFX-201ENST00000375167 PEG3Q9GZU2 1588 aa35.33■■■■□ 3.25
H2AFX-201ENST00000375167 MRC2Q9UBG0 1479 aa35.32■■■■□ 3.25
H2AFX-201ENST00000375167 WDR62O43379 1518 aa35.27■■■■□ 3.24
H2AFX-201ENST00000375167 OSCARQ8IYS5 282 aa35.2■■■■□ 3.23
H2AFX-201ENST00000375167 CADPSQ9ULU8 1353 aa35.1■■■■□ 3.21
H2AFX-201ENST00000375167 RIMBP3CA6NJZ7 1639 aa34.94■■■■□ 3.18
H2AFX-201ENST00000375167 RIMBP3BA6NNM3 1639 aa34.94■■■■□ 3.18
H2AFX-201ENST00000375167 RIMBP3Q9UFD9 1639 aa34.94■■■■□ 3.18
H2AFX-201ENST00000375167 CEP164Q9UPV0 1460 aa34.93■■■■□ 3.18
H2AFX-201ENST00000375167 MROH2BQ7Z745 1585 aa34.9■■■■□ 3.18
H2AFX-201ENST00000375167 FANCD2Q9BXW9 1451 aa34.75■■■■□ 3.15
H2AFX-201ENST00000375167 ARHGEF11O15085 1522 aa34.69■■■■□ 3.14
H2AFX-201ENST00000375167 TRHP20396 242 aaPredicted RBP34.52■■■■□ 3.12
H2AFX-201ENST00000375167 URB2Q14146 1524 aaKnown RBP34.52■■■■□ 3.12
H2AFX-201ENST00000375167 AEBP2Q6ZN18 517 aaPredicted RBP34.49■■■■□ 3.11
H2AFX-201ENST00000375167 CFTRP13569 1480 aa34.45■■■■□ 3.11
H2AFX-201ENST00000375167 CYB5RLQ6IPT4 315 aa34.45■■■■□ 3.11
H2AFX-201ENST00000375167 WIZO95785 1651 aa34.44■■■■□ 3.1
H2AFX-201ENST00000375167 ZNF608Q9ULD9 1512 aaPredicted RBP34.29■■■■□ 3.08
H2AFX-201ENST00000375167 IFT140Q96RY7 1462 aa34.27■■■■□ 3.08
H2AFX-201ENST00000375167 ARAP1Q96P48 1450 aa34.25■■■■□ 3.07
H2AFX-201ENST00000375167 PRDM2Q13029 1718 aa34.12■■■■□ 3.05
H2AFX-201ENST00000375167 CHD1O14646 1710 aa34.11■■■■□ 3.05
H2AFX-201ENST00000375167 EIF4G3O43432 1585 aaKnown RBP34.11■■■■□ 3.05
H2AFX-201ENST00000375167 RSF1Q96T23 1441 aaPredicted RBP34.07■■■■□ 3.05
H2AFX-201ENST00000375167 TOP2AP11388 1531 aaKnown RBP33.95■■■■□ 3.03
H2AFX-201ENST00000375167 TOPBP1Q92547 1522 aa33.94■■■■□ 3.02
H2AFX-201ENST00000375167 FBLN2P98095 1184 aa33.85■■■■□ 3.01
H2AFX-201ENST00000375167 ABCC8Q09428 1581 aa33.82■■■■□ 3
H2AFX-201ENST00000375167 AQRO60306 1485 aaKnown RBP eCLIP33.8■■■■□ 37e-6■□□□□ 9.9
H2AFX-201ENST00000375167 TARBP1Q13395 1621 aaKnown RBP33.74■■■□□ 2.99
H2AFX-201ENST00000375167 DNMBPQ6XZF7 1577 aa33.74■■■□□ 2.99
H2AFX-201ENST00000375167 CLASP1Q7Z460 1538 aa33.65■■■□□ 2.98
H2AFX-201ENST00000375167 SYNJ1O43426 1573 aa33.56■■■□□ 2.96
H2AFX-201ENST00000375167 CCDC88BA6NC98 1476 aa33.51■■■□□ 2.96
H2AFX-201ENST00000375167 POLA1P09884 1462 aaPredicted RBP33.51■■■□□ 2.96
H2AFX-201ENST00000375167 SNAPC4Q5SXM2 1469 aa33.47■■■□□ 2.95
H2AFX-201ENST00000375167 CHMP7Q8WUX9 453 aaPredicted RBP33.4■■■□□ 2.94
H2AFX-201ENST00000375167 TDRD9Q8NDG6 1382 aaKnown RBP33.4■■■□□ 2.94
H2AFX-201ENST00000375167 GAPVD1Q14C86 1478 aa33.38■■■□□ 2.93
H2AFX-201ENST00000375167 WDR97A6NE52 1622 aa33.38■■■□□ 2.93
H2AFX-201ENST00000375167 RAD54L2Q9Y4B4 1467 aa33.38■■■□□ 2.93
H2AFX-201ENST00000375167 MAGI1Q96QZ7 1491 aaPredicted RBP33.36■■■□□ 2.93
H2AFX-201ENST00000375167 SOGA1O94964 1423 aa33.31■■■□□ 2.92
H2AFX-201ENST00000375167 SYNJ2O15056 1496 aa33.26■■■□□ 2.91
H2AFX-201ENST00000375167 GRIN2BQ13224 1484 aa33.22■■■□□ 2.91
H2AFX-201ENST00000375167 FGD5Q6ZNL6 1462 aa33.13■■■□□ 2.89
H2AFX-201ENST00000375167 ILDR1Q86SU0 546 aaPredicted RBP33.1■■■□□ 2.89
H2AFX-201ENST00000375167 PBRM1Q86U86 1689 aa33.05■■■□□ 2.88
H2AFX-201ENST00000375167 KIF13AQ9H1H9 1805 aa33.03■■■□□ 2.88
H2AFX-201ENST00000375167 ERCC6L2Q5T890 1561 aa32.98■■■□□ 2.87
H2AFX-201ENST00000375167 CUX1P39880 1505 aa32.88■■■□□ 2.85
H2AFX-201ENST00000375167 CEP170Q5SW79 1584 aa32.86■■■□□ 2.85
H2AFX-201ENST00000375167 GRIN2AQ12879 1464 aa32.78■■■□□ 2.84
H2AFX-201ENST00000375167 ABCA5Q8WWZ7 1642 aa32.77■■■□□ 2.84
H2AFX-201ENST00000375167 KDM4FA0A1W2PPD8 638 aa32.76■■■□□ 2.83
H2AFX-201ENST00000375167 SHROOM2Q13796 1616 aa32.73■■■□□ 2.83
H2AFX-201ENST00000375167 NUP160Q12769 1436 aa32.71■■■□□ 2.83
H2AFX-201ENST00000375167 ABCA10Q8WWZ4 1543 aa32.68■■■□□ 2.82
H2AFX-201ENST00000375167 ABCC10Q5T3U5 1492 aa32.65■■■□□ 2.82
H2AFX-201ENST00000375167 KDM6BO15054 1643 aa32.65■■■□□ 2.82
H2AFX-201ENST00000375167 FAM69CQ0P6D2 419 aa32.64■■■□□ 2.82
H2AFX-201ENST00000375167 ADAMTS12P58397 1594 aa32.63■■■□□ 2.81
H2AFX-201ENST00000375167 DIP2BQ9P265 1576 aa32.57■■■□□ 2.8
H2AFX-201ENST00000375167 MAPKBP1O60336 1514 aa32.53■■■□□ 2.8
H2AFX-201ENST00000375167 PRG4Q92954 1404 aaPredicted RBP32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms