RNA–Protein interactions for RNA: ENST00000452544.2

ARID1B-206, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 2

Gene ARID1B, Length 4,443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-206ENST00000452544 DCAF8L2P0C7V8 631 aa13.73□□□□□ -0.21
ARID1B-206ENST00000452544 NISCHQ9Y2I1 1504 aa13.42□□□□□ -0.26
ARID1B-206ENST00000452544 SHROOM4Q9ULL8 1493 aa12.59□□□□□ -0.39
ARID1B-206ENST00000452544 SUPT5HO00267 1087 aaKnown RBP12.53□□□□□ -0.4
ARID1B-206ENST00000452544 EHMT2Q96KQ7 1210 aa12.11□□□□□ -0.47
ARID1B-206ENST00000452544 ABCC9O60706 1549 aa12.03□□□□□ -0.48
ARID1B-206ENST00000452544 PABPN1Q86U42 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
ARID1B-206ENST00000452544 FAM9AQ8IZU1 332 aaPredicted RBP11.83□□□□□ -0.52
ARID1B-206ENST00000452544 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
ARID1B-206ENST00000452544 APLP2Q06481 763 aa11.62□□□□□ -0.55
ARID1B-206ENST00000452544 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
ARID1B-206ENST00000452544 ATP1B4Q9UN42 357 aaPredicted RBP11.58□□□□□ -0.56
ARID1B-206ENST00000452544 TTBK1Q5TCY1 1321 aaPredicted RBP11.56□□□□□ -0.56
ARID1B-206ENST00000452544 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
ARID1B-206ENST00000452544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.32□□□□□ -0.6
ARID1B-206ENST00000452544 HNRNPUL2Q1KMD3 747 aaKnown RBP11.32□□□□□ -0.6
ARID1B-206ENST00000452544 FBLN2P98095 1184 aa11.27□□□□□ -0.61
ARID1B-206ENST00000452544 MYT1LQ9UL68 1186 aa11.25□□□□□ -0.61
ARID1B-206ENST00000452544 SCRIBQ14160 1630 aa11.21□□□□□ -0.61
ARID1B-206ENST00000452544 PPARGC1BQ86YN6 1023 aaKnown RBP11.15□□□□□ -0.62
ARID1B-206ENST00000452544 CCDC180Q9P1Z9 1646 aa11.09□□□□□ -0.63
ARID1B-206ENST00000452544 PCGF6Q9BYE7 350 aa11.08□□□□□ -0.63
ARID1B-206ENST00000452544 ITGAEP38570 1179 aa11.05□□□□□ -0.64
ARID1B-206ENST00000452544 RB1CC1Q8TDY2 1594 aa11.05□□□□□ -0.64
ARID1B-206ENST00000452544 CHIC1Q5VXU3 224 aa11.04□□□□□ -0.64
ARID1B-206ENST00000452544 ZCCHC6Q5VYS8 1495 aaKnown RBP11.04□□□□□ -0.64
ARID1B-206ENST00000452544 LOC105371045A0A1W2PR82 267 aa11.01□□□□□ -0.65
ARID1B-206ENST00000452544 ARID3CA6NKF2 412 aa10.95□□□□□ -0.66
ARID1B-206ENST00000452544 P3H3Q8IVL6 736 aa10.91□□□□□ -0.66
ARID1B-206ENST00000452544 CCER1Q8TC90 406 aaPredicted RBP10.9□□□□□ -0.66
ARID1B-206ENST00000452544 NACADO15069 1562 aa10.89□□□□□ -0.67
ARID1B-206ENST00000452544 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
ARID1B-206ENST00000452544 MYT1Q01538 1121 aa10.81□□□□□ -0.68
ARID1B-206ENST00000452544 NPM1P06748 294 aaKnown RBP eCLIP10.8□□□□□ -0.68
ARID1B-206ENST00000452544 CHMP7Q8WUX9 453 aaPredicted RBP10.79□□□□□ -0.68
ARID1B-206ENST00000452544 FAM50AQ14320 339 aaKnown RBP10.79□□□□□ -0.68
ARID1B-206ENST00000452544 ERCC6Q03468 1493 aa10.76□□□□□ -0.69
ARID1B-206ENST00000452544 CSRNP3Q8WYN3 585 aa10.76□□□□□ -0.69
ARID1B-206ENST00000452544 PLPPR3Q6T4P5 718 aa10.75□□□□□ -0.69
ARID1B-206ENST00000452544 POLR3GLQ9BT43 218 aa10.73□□□□□ -0.69
ARID1B-206ENST00000452544 BAZ1BQ9UIG0 1483 aaKnown RBP10.72□□□□□ -0.69
ARID1B-206ENST00000452544 ZNF777Q9ULD5 760 aaPredicted RBP10.72□□□□□ -0.69
ARID1B-206ENST00000452544 TRIM52Q96A61 297 aa10.68□□□□□ -0.7
ARID1B-206ENST00000452544 CNGB1Q14028 1251 aaPredicted RBP10.66□□□□□ -0.7
ARID1B-206ENST00000452544 CECR2Q9BXF3 1484 aa10.65□□□□□ -0.71
ARID1B-206ENST00000452544 CDK11AQ9UQ88 783 aaPredicted RBP10.64□□□□□ -0.71
ARID1B-206ENST00000452544 SLC4A1APQ9BWU0 796 aaKnown RBP10.64□□□□□ -0.71
ARID1B-206ENST00000452544 ESF1Q9H501 851 aaKnown RBP10.64□□□□□ -0.71
ARID1B-206ENST00000452544 RSF1Q96T23 1441 aaPredicted RBP10.64□□□□□ -0.71
ARID1B-206ENST00000452544 BCANQ96GW7 911 aa10.62□□□□□ -0.71
ARID1B-206ENST00000452544 TRIM26Q12899 539 aaPredicted RBP10.6□□□□□ -0.71
ARID1B-206ENST00000452544 KCNH8Q96L42 1107 aa10.58□□□□□ -0.72
ARID1B-206ENST00000452544 TRHP20396 242 aaPredicted RBP10.58□□□□□ -0.72
ARID1B-206ENST00000452544 ZNF326Q5BKZ1 582 aaKnown RBP10.55□□□□□ -0.72
ARID1B-206ENST00000452544 BAZ1AQ9NRL2 1556 aaPredicted RBP10.54□□□□□ -0.72
ARID1B-206ENST00000452544 ZEB1P37275 1124 aaPredicted RBP10.53□□□□□ -0.72
ARID1B-206ENST00000452544 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
ARID1B-206ENST00000452544 NEUROD1Q13562 356 aa10.51□□□□□ -0.73
ARID1B-206ENST00000452544 CHGAP10645 457 aaKnown RBP10.49□□□□□ -0.73
ARID1B-206ENST00000452544 STAG3Q9UJ98 1225 aa10.49□□□□□ -0.73
ARID1B-206ENST00000452544 WRNQ14191 1432 aaPredicted RBP eCLIP10.47□□□□□ -0.73
ARID1B-206ENST00000452544 PDS5BQ9NTI5 1447 aa10.46□□□□□ -0.74
ARID1B-206ENST00000452544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.44□□□□□ -0.745e-7■■□□□ 14.1
ARID1B-206ENST00000452544 CHIC2Q9UKJ5 165 aa10.44□□□□□ -0.74
ARID1B-206ENST00000452544 MROH2BQ7Z745 1585 aa10.43□□□□□ -0.74
ARID1B-206ENST00000452544 ARID4BQ4LE39 1312 aaPredicted RBP10.43□□□□□ -0.74
ARID1B-206ENST00000452544 PLEKHD1A6NEE1 506 aa10.43□□□□□ -0.74
ARID1B-206ENST00000452544 TDRD9Q8NDG6 1382 aaKnown RBP10.41□□□□□ -0.74
ARID1B-206ENST00000452544 TSPY4P0CV99 314 aa10.4□□□□□ -0.74
ARID1B-206ENST00000452544 TSPY10P0CW01 314 aa10.4□□□□□ -0.74
ARID1B-206ENST00000452544 SENP3Q9H4L4 574 aaPredicted RBP10.4□□□□□ -0.75
ARID1B-206ENST00000452544 KIF27Q86VH2 1401 aa10.39□□□□□ -0.75
ARID1B-206ENST00000452544 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
ARID1B-206ENST00000452544 MTUS2Q5JR59 1369 aa10.39□□□□□ -0.75
ARID1B-206ENST00000452544 YTHDC1Q96MU7 727 aaKnown RBP10.39□□□□□ -0.75
ARID1B-206ENST00000452544 CADPSQ9ULU8 1353 aa10.36□□□□□ -0.75
ARID1B-206ENST00000452544 CUX2O14529 1486 aa10.35□□□□□ -0.75
ARID1B-206ENST00000452544 MYO15BQ96JP2 1530 aa10.34□□□□□ -0.75
ARID1B-206ENST00000452544 ATAD2BQ9ULI0 1458 aa10.33□□□□□ -0.76
ARID1B-206ENST00000452544 DNAJC5BQ9UF47 199 aa10.32□□□□□ -0.76
ARID1B-206ENST00000452544 CCDC88BA6NC98 1476 aa10.32□□□□□ -0.76
ARID1B-206ENST00000452544 SOGA1O94964 1423 aa10.32□□□□□ -0.76
ARID1B-206ENST00000452544 CYB5RLQ6IPT4 315 aa10.31□□□□□ -0.76
ARID1B-206ENST00000452544 CLIP1P30622 1438 aa10.3□□□□□ -0.76
ARID1B-206ENST00000452544 CARMIL1Q5VZK9 1371 aa10.29□□□□□ -0.76
ARID1B-206ENST00000452544 MLECQ14165 292 aa10.29□□□□□ -0.76
ARID1B-206ENST00000452544 EIF4G1Q04637 1599 aaKnown RBP10.29□□□□□ -0.76
ARID1B-206ENST00000452544 CFDP1Q9UEE9 299 aaPredicted RBP10.28□□□□□ -0.76
ARID1B-206ENST00000452544 SLC24A1O60721 1099 aa10.26□□□□□ -0.77
ARID1B-206ENST00000452544 OSCARQ8IYS5 282 aa10.26□□□□□ -0.77
ARID1B-206ENST00000452544 RRP7BPQ9NSQ0 103 aa10.25□□□□□ -0.77
ARID1B-206ENST00000452544 CEP164Q9UPV0 1460 aa10.25□□□□□ -0.77
ARID1B-206ENST00000452544 PLEKHG5O94827 1062 aa10.25□□□□□ -0.77
ARID1B-206ENST00000452544 CENPBP07199 599 aaPredicted RBP10.24□□□□□ -0.77
ARID1B-206ENST00000452544 PPP1R15AO75807 674 aaPredicted RBP10.24□□□□□ -0.77
ARID1B-206ENST00000452544 WIZO95785 1651 aa10.23□□□□□ -0.77
ARID1B-206ENST00000452544 C14orf37Q86TY3 774 aa10.23□□□□□ -0.77
ARID1B-206ENST00000452544 SCAF1Q9H7N4 1312 aaKnown RBP10.22□□□□□ -0.77
ARID1B-206ENST00000452544 EEA1Q15075 1411 aa10.22□□□□□ -0.77
ARID1B-206ENST00000452544 HRCP23327 699 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms