RNA–Protein interactions for RNA: ENST00000477932.5

ACSS2-211, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

TSL 5

Gene ACSS2, Length 2,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-211ENST00000477932 NISCHQ9Y2I1 1504 aa40.98■■■■■ 4.15
ACSS2-211ENST00000477932 SHROOM4Q9ULL8 1493 aa35.17■■■■□ 3.22
ACSS2-211ENST00000477932 ZCCHC6Q5VYS8 1495 aaKnown RBP34.75■■■■□ 3.15
ACSS2-211ENST00000477932 CCDC180Q9P1Z9 1646 aa34.7■■■■□ 3.14
ACSS2-211ENST00000477932 SUPT5HO00267 1087 aaKnown RBP34.64■■■■□ 3.14
ACSS2-211ENST00000477932 DCAF8L2P0C7V8 631 aa33.85■■■■□ 3.01
ACSS2-211ENST00000477932 CHIC1Q5VXU3 224 aa33.85■■■■□ 3.01
ACSS2-211ENST00000477932 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
ACSS2-211ENST00000477932 DCAF1Q9Y4B6 1507 aa33.62■■■□□ 2.97
ACSS2-211ENST00000477932 HRCP23327 699 aa33.37■■■□□ 2.93
ACSS2-211ENST00000477932 PCGF6Q9BYE7 350 aa33.13■■■□□ 2.89
ACSS2-211ENST00000477932 ABCC9O60706 1549 aa32.87■■■□□ 2.85
ACSS2-211ENST00000477932 LOC105371045A0A1W2PR82 267 aa32.85■■■□□ 2.85
ACSS2-211ENST00000477932 PPARGC1BQ86YN6 1023 aaKnown RBP32.61■■■□□ 2.81
ACSS2-211ENST00000477932 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
ACSS2-211ENST00000477932 RSF1Q96T23 1441 aaPredicted RBP32.56■■■□□ 2.8
ACSS2-211ENST00000477932 TRIM26Q12899 539 aaPredicted RBP32.43■■■□□ 2.78
ACSS2-211ENST00000477932 RB1CC1Q8TDY2 1594 aa32.3■■■□□ 2.76
ACSS2-211ENST00000477932 TRIM41Q8WV44 630 aa32.24■■■□□ 2.75
ACSS2-211ENST00000477932 NACADO15069 1562 aa31.99■■■□□ 2.71
ACSS2-211ENST00000477932 FAM9AQ8IZU1 332 aaPredicted RBP31.99■■■□□ 2.71
ACSS2-211ENST00000477932 CECR2Q9BXF3 1484 aa31.95■■■□□ 2.71
ACSS2-211ENST00000477932 MROH2BQ7Z745 1585 aa31.89■■■□□ 2.69
ACSS2-211ENST00000477932 ZEB1P37275 1124 aaPredicted RBP31.86■■■□□ 2.69
ACSS2-211ENST00000477932 WIZO95785 1651 aa31.74■■■□□ 2.67
ACSS2-211ENST00000477932 EHMT2Q96KQ7 1210 aa31.71■■■□□ 2.67
ACSS2-211ENST00000477932 BAZ1AQ9NRL2 1556 aaPredicted RBP31.58■■■□□ 2.65
ACSS2-211ENST00000477932 EIF4G1Q04637 1599 aaKnown RBP31.48■■■□□ 2.63
ACSS2-211ENST00000477932 TOP2AP11388 1531 aaKnown RBP31.24■■■□□ 2.59
ACSS2-211ENST00000477932 SMARCA4P51532 1647 aa31.16■■■□□ 2.58
ACSS2-211ENST00000477932 ABCC8Q09428 1581 aa31.15■■■□□ 2.58
ACSS2-211ENST00000477932 CCDC88BA6NC98 1476 aa31.11■■■□□ 2.57
ACSS2-211ENST00000477932 SMARCA2P51531 1590 aa31.09■■■□□ 2.57
ACSS2-211ENST00000477932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.07■■■□□ 2.56
ACSS2-211ENST00000477932 CCER1Q8TC90 406 aaPredicted RBP31.01■■■□□ 2.56
ACSS2-211ENST00000477932 WRNQ14191 1432 aaPredicted RBP eCLIP31■■■□□ 2.55
ACSS2-211ENST00000477932 UNC13AQ9UPW8 1703 aa30.99■■■□□ 2.55
ACSS2-211ENST00000477932 SCAF1Q9H7N4 1312 aaKnown RBP30.95■■■□□ 2.54
ACSS2-211ENST00000477932 CEP162Q5TB80 1403 aa30.94■■■□□ 2.54
ACSS2-211ENST00000477932 SOGA1O94964 1423 aa30.91■■■□□ 2.54
ACSS2-211ENST00000477932 TNIKQ9UKE5 1360 aa30.85■■■□□ 2.53
ACSS2-211ENST00000477932 EEA1Q15075 1411 aa30.81■■■□□ 2.52
ACSS2-211ENST00000477932 TTBK1Q5TCY1 1321 aaPredicted RBP30.79■■■□□ 2.52
ACSS2-211ENST00000477932 CSRNP3Q8WYN3 585 aa30.75■■■□□ 2.51
ACSS2-211ENST00000477932 RUSC2Q8N2Y8 1516 aa30.74■■■□□ 2.51
ACSS2-211ENST00000477932 PELP1Q8IZL8 1130 aaKnown RBP30.68■■■□□ 2.5
ACSS2-211ENST00000477932 UBTFP17480 764 aaKnown RBP30.66■■■□□ 2.5
ACSS2-211ENST00000477932 GOLGA3Q08378 1498 aa30.63■■■□□ 2.49
ACSS2-211ENST00000477932 DIEXFQ68CQ4 756 aaKnown RBP30.58■■■□□ 2.49
ACSS2-211ENST00000477932 BICRAQ9NZM4 1560 aa30.56■■■□□ 2.48
ACSS2-211ENST00000477932 ACIN1Q9UKV3 1341 aaKnown RBP30.55■■■□□ 2.48
ACSS2-211ENST00000477932 PEG3Q9GZU2 1588 aa30.54■■■□□ 2.48
ACSS2-211ENST00000477932 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.486e-7■■□□□ 12.5
ACSS2-211ENST00000477932 NEUROD1Q13562 356 aa30.48■■■□□ 2.47
ACSS2-211ENST00000477932 SYNJ1O43426 1573 aa30.43■■■□□ 2.46
ACSS2-211ENST00000477932 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
ACSS2-211ENST00000477932 KIF21BO75037 1637 aa30.4■■■□□ 2.46
ACSS2-211ENST00000477932 CENPBP07199 599 aaPredicted RBP30.33■■■□□ 2.45
ACSS2-211ENST00000477932 CLIP1P30622 1438 aa30.3■■■□□ 2.44
ACSS2-211ENST00000477932 ZNF316A6NFI3 1004 aaPredicted RBP30.28■■■□□ 2.44
ACSS2-211ENST00000477932 ATAD2BQ9ULI0 1458 aa30.27■■■□□ 2.44
ACSS2-211ENST00000477932 VPS8Q8N3P4 1428 aa30.21■■■□□ 2.43
ACSS2-211ENST00000477932 BAZ1BQ9UIG0 1483 aaKnown RBP30.21■■■□□ 2.43
ACSS2-211ENST00000477932 GTF3C3Q9Y5Q9 886 aa30.2■■■□□ 2.42
ACSS2-211ENST00000477932 HNRNPUL2Q1KMD3 747 aaKnown RBP30.18■■■□□ 2.42
ACSS2-211ENST00000477932 RAPGEF2Q9Y4G8 1499 aa30.16■■■□□ 2.42
ACSS2-211ENST00000477932 APLP2Q06481 763 aa30.05■■■□□ 2.4
ACSS2-211ENST00000477932 TOP2BQ02880 1626 aa30.03■■■□□ 2.4
ACSS2-211ENST00000477932 RANGAP1P46060 587 aaPredicted RBP29.96■■■□□ 2.39
ACSS2-211ENST00000477932 BIVM-ERCC5R4GMW8 1640 aa29.91■■■□□ 2.38
ACSS2-211ENST00000477932 MIER1Q8N108 512 aa29.88■■■□□ 2.37
ACSS2-211ENST00000477932 YTHDC1Q96MU7 727 aaKnown RBP29.88■■■□□ 2.37
ACSS2-211ENST00000477932 ERICH3Q5RHP9 1530 aa29.85■■■□□ 2.37
ACSS2-211ENST00000477932 PRXQ9BXM0 1461 aa29.82■■■□□ 2.36
ACSS2-211ENST00000477932 ARAP1Q96P48 1450 aa29.77■■■□□ 2.36
ACSS2-211ENST00000477932 CLSPNQ9HAW4 1339 aa29.69■■■□□ 2.34
ACSS2-211ENST00000477932 DHX57Q6P158 1386 aaKnown RBP29.67■■■□□ 2.34
ACSS2-211ENST00000477932 CUX1P39880 1505 aa29.66■■■□□ 2.34
ACSS2-211ENST00000477932 HMGXB3Q12766 1538 aa29.65■■■□□ 2.34
ACSS2-211ENST00000477932 KANK4Q5T7N3 995 aaPredicted RBP29.64■■■□□ 2.34
ACSS2-211ENST00000477932 NCAPD3P42695 1498 aa29.6■■■□□ 2.33
ACSS2-211ENST00000477932 KIF27Q86VH2 1401 aa29.6■■■□□ 2.33
ACSS2-211ENST00000477932 RRBP1Q9P2E9 1410 aaKnown RBP29.55■■■□□ 2.32
ACSS2-211ENST00000477932 CFTRP13569 1480 aa29.48■■■□□ 2.31
ACSS2-211ENST00000477932 ARHGAP35Q9NRY4 1499 aa29.46■■■□□ 2.31
ACSS2-211ENST00000477932 CUX2O14529 1486 aa29.43■■■□□ 2.3
ACSS2-211ENST00000477932 CCNB3Q8WWL7 1395 aa29.41■■■□□ 2.3
ACSS2-211ENST00000477932 PRDM2Q13029 1718 aa29.27■■■□□ 2.28
ACSS2-211ENST00000477932 ITGAEP38570 1179 aa29.26■■■□□ 2.27
ACSS2-211ENST00000477932 IGF1RP08069 1367 aa29.24■■■□□ 2.27
ACSS2-211ENST00000477932 TIAM1Q13009 1591 aa29.21■■■□□ 2.27
ACSS2-211ENST00000477932 MAP3K1Q13233 1512 aa29.19■■■□□ 2.26
ACSS2-211ENST00000477932 RAB3GAP2Q9H2M9 1393 aa29.19■■■□□ 2.26
ACSS2-211ENST00000477932 MYT1Q01538 1121 aa29.18■■■□□ 2.26
ACSS2-211ENST00000477932 MAPKBP1O60336 1514 aa29.14■■■□□ 2.25
ACSS2-211ENST00000477932 CARMIL1Q5VZK9 1371 aa29.12■■■□□ 2.25
ACSS2-211ENST00000477932 LRRC9Q6ZRR7 1453 aa29.09■■■□□ 2.25
ACSS2-211ENST00000477932 FGD5Q6ZNL6 1462 aa29.09■■■□□ 2.25
ACSS2-211ENST00000477932 CADPSQ9ULU8 1353 aa29.07■■■□□ 2.24
ACSS2-211ENST00000477932 SETD5Q9C0A6 1442 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms