RNA–Protein interactions for RNA: ENST00000554902.5

PNN-204, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-204ENST00000554902 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
PNN-204ENST00000554902 CHIC1Q5VXU3 224 aa24■■□□□ 1.43
PNN-204ENST00000554902 SENP3Q9H4L4 574 aaPredicted RBP21.33■■□□□ 1.01
PNN-204ENST00000554902 PHF23Q9BUL5 403 aaPredicted RBP21.1■□□□□ 0.97
PNN-204ENST00000554902 FOXD1Q16676 465 aa19.84■□□□□ 0.77
PNN-204ENST00000554902 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
PNN-204ENST00000554902 PPP6R1Q9UPN7 881 aa18.74■□□□□ 0.59
PNN-204ENST00000554902 ADRA2BP18089 450 aa18.71■□□□□ 0.59
PNN-204ENST00000554902 PIAS4Q8N2W9 510 aaPredicted RBP18.62■□□□□ 0.57
PNN-204ENST00000554902 MSH5O43196 834 aa18.49■□□□□ 0.55
PNN-204ENST00000554902 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
PNN-204ENST00000554902 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
PNN-204ENST00000554902 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
PNN-204ENST00000554902 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
PNN-204ENST00000554902 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
PNN-204ENST00000554902 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
PNN-204ENST00000554902 HOXD11P31277 338 aaPredicted RBP16.41■□□□□ 0.22
PNN-204ENST00000554902 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
PNN-204ENST00000554902 RNF216Q9NWF9 866 aaPredicted RBP16.36■□□□□ 0.21
PNN-204ENST00000554902 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
PNN-204ENST00000554902 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
PNN-204ENST00000554902 KCNA4P22459 653 aa16.03■□□□□ 0.16
PNN-204ENST00000554902 DNAJC5BQ9UF47 199 aa15.8■□□□□ 0.12
PNN-204ENST00000554902 RNF39Q9H2S5 420 aa15.79■□□□□ 0.12
PNN-204ENST00000554902 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
PNN-204ENST00000554902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.67■□□□□ 0.15e-17■■■□□ 17.3
PNN-204ENST00000554902 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
PNN-204ENST00000554902 U3KPZ7 1027 aaPredicted RBP15.34■□□□□ 0.05
PNN-204ENST00000554902 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
PNN-204ENST00000554902 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
PNN-204ENST00000554902 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ -0
PNN-204ENST00000554902 CAPN15O75808 1086 aa15.04■□□□□ -0
PNN-204ENST00000554902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
PNN-204ENST00000554902 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
PNN-204ENST00000554902 APLP2Q06481 763 aa14.96□□□□□ -0.01
PNN-204ENST00000554902 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
PNN-204ENST00000554902 MYCNP04198 464 aaPredicted RBP14.91□□□□□ -0.02
PNN-204ENST00000554902 FOXD4L1Q9NU39 408 aa14.88□□□□□ -0.03
PNN-204ENST00000554902 DSG3P32926 999 aa14.87□□□□□ -0.03
PNN-204ENST00000554902 TRHP20396 242 aaPredicted RBP14.86□□□□□ -0.03
PNN-204ENST00000554902 EHMT2Q96KQ7 1210 aa14.85□□□□□ -0.03
PNN-204ENST00000554902 ZNF219Q9P2Y4 722 aaPredicted RBP14.83□□□□□ -0.04
PNN-204ENST00000554902 ZBTB22O15209 634 aa14.72□□□□□ -0.05
PNN-204ENST00000554902 ABCB7O75027 752 aa14.7□□□□□ -0.06
PNN-204ENST00000554902 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
PNN-204ENST00000554902 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
PNN-204ENST00000554902 POLA2Q14181 598 aa14.51□□□□□ -0.09
PNN-204ENST00000554902 ATXN8OSP0DMR3 200 aa14.41□□□□□ -0.1
PNN-204ENST00000554902 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
PNN-204ENST00000554902 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
PNN-204ENST00000554902 OSCARQ8IYS5 282 aa14.01□□□□□ -0.17
PNN-204ENST00000554902 FBLN2P98095 1184 aa13.99□□□□□ -0.17
PNN-204ENST00000554902 AKT1S1Q96B36 256 aa13.93□□□□□ -0.18
PNN-204ENST00000554902 MKRN4PQ13434 485 aaPredicted RBP13.88□□□□□ -0.19
PNN-204ENST00000554902 POTEHQ6S545 545 aa13.88□□□□□ -0.19
PNN-204ENST00000554902 SPDYE2BA6NHP3 402 aa13.8□□□□□ -0.2
PNN-204ENST00000554902 SPDYE6P0CI01 402 aa13.8□□□□□ -0.2
PNN-204ENST00000554902 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
PNN-204ENST00000554902 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
PNN-204ENST00000554902 REM2Q8IYK8 340 aaPredicted RBP13.79□□□□□ -0.2
PNN-204ENST00000554902 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
PNN-204ENST00000554902 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
PNN-204ENST00000554902 SSUH2Q9Y2M2 353 aa13.62□□□□□ -0.23
PNN-204ENST00000554902 SPDYE1Q8NFV5 336 aaPredicted RBP13.51□□□□□ -0.25
PNN-204ENST00000554902 PIP4P2Q8N4L2 257 aa13.5□□□□□ -0.25
PNN-204ENST00000554902 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
PNN-204ENST00000554902 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
PNN-204ENST00000554902 FXR2P51116 673 aaKnown RBP eCLIP13.46□□□□□ -0.251e-6■■□□□ 14.2
PNN-204ENST00000554902 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
PNN-204ENST00000554902 PRR29P0C7W0 189 aa13.31□□□□□ -0.28
PNN-204ENST00000554902 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
PNN-204ENST00000554902 HAX1O00165 279 aa13.23□□□□□ -0.29
PNN-204ENST00000554902 FKBP8Q14318 412 aa13.2□□□□□ -0.3
PNN-204ENST00000554902 CHADLQ6NUI6 762 aa13.19□□□□□ -0.3
PNN-204ENST00000554902 STAG3Q9UJ98 1225 aa13.18□□□□□ -0.3
PNN-204ENST00000554902 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
PNN-204ENST00000554902 EVX2Q03828 476 aa13.05□□□□□ -0.32
PNN-204ENST00000554902 PROM2Q8N271 834 aa13.04□□□□□ -0.32
PNN-204ENST00000554902 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
PNN-204ENST00000554902 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
PNN-204ENST00000554902 CREBZFQ9NS37 354 aa13□□□□□ -0.33
PNN-204ENST00000554902 CD44P16070 742 aaKnown RBP12.88□□□□□ -0.35
PNN-204ENST00000554902 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
PNN-204ENST00000554902 MNX1P50219 401 aaPredicted RBP12.79□□□□□ -0.36
PNN-204ENST00000554902 GABBR2O75899 941 aa12.78□□□□□ -0.36
PNN-204ENST00000554902 MIER1Q8N108 512 aa12.75□□□□□ -0.37
PNN-204ENST00000554902 ZRANB1Q9UGI0 708 aa12.74□□□□□ -0.37
PNN-204ENST00000554902 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
PNN-204ENST00000554902 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
PNN-204ENST00000554902 CLCN6P51797 869 aa12.68□□□□□ -0.38
PNN-204ENST00000554902 PLCD3Q8N3E9 789 aa12.68□□□□□ -0.38
PNN-204ENST00000554902 ZNF579Q8NAF0 562 aaKnown RBP12.68□□□□□ -0.38
PNN-204ENST00000554902 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
PNN-204ENST00000554902 PHF12Q96QT6 1004 aa12.58□□□□□ -0.4
PNN-204ENST00000554902 TSPYL2Q9H2G4 693 aaPredicted RBP12.57□□□□□ -0.4
PNN-204ENST00000554902 ZBTB47Q9UFB7 747 aaPredicted RBP12.56□□□□□ -0.4
PNN-204ENST00000554902 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.41
PNN-204ENST00000554902 VASPP50552 380 aaPredicted RBP12.52□□□□□ -0.41
PNN-204ENST00000554902 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
PNN-204ENST00000554902 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms