RNA–Protein interactions for RNA: ENST00000531280.1

PCNX3-205, Transcript of pecanex 3, humanhuman

TSL 5

Gene PCNX3, Length 472 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-205ENST00000531280 NISCHQ9Y2I1 1504 aa39.76■■■■□ 3.96
PCNX3-205ENST00000531280 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
PCNX3-205ENST00000531280 ABCC9O60706 1549 aa35.32■■■■□ 3.24
PCNX3-205ENST00000531280 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
PCNX3-205ENST00000531280 DCAF8L2P0C7V8 631 aa33.58■■■□□ 2.97
PCNX3-205ENST00000531280 NACADO15069 1562 aa33.54■■■□□ 2.96
PCNX3-205ENST00000531280 MYO15BQ96JP2 1530 aa33.19■■■□□ 2.9
PCNX3-205ENST00000531280 DNAJC5BQ9UF47 199 aa33.07■■■□□ 2.88
PCNX3-205ENST00000531280 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.88
PCNX3-205ENST00000531280 ZCCHC6Q5VYS8 1495 aaKnown RBP32.96■■■□□ 2.87
PCNX3-205ENST00000531280 DCAF1Q9Y4B6 1507 aa32.85■■■□□ 2.85
PCNX3-205ENST00000531280 UNC13AQ9UPW8 1703 aa32.82■■■□□ 2.84
PCNX3-205ENST00000531280 BICRAQ9NZM4 1560 aa32.71■■■□□ 2.83
PCNX3-205ENST00000531280 SCRIBQ14160 1630 aa32.33■■■□□ 2.77
PCNX3-205ENST00000531280 SHROOM4Q9ULL8 1493 aa32.28■■■□□ 2.76
PCNX3-205ENST00000531280 CC2D2AQ9P2K1 1620 aa31.87■■■□□ 2.69
PCNX3-205ENST00000531280 EIF4G1Q04637 1599 aaKnown RBP31.86■■■□□ 2.69
PCNX3-205ENST00000531280 CECR2Q9BXF3 1484 aa31.79■■■□□ 2.68
PCNX3-205ENST00000531280 NCAPD3P42695 1498 aa31.04■■■□□ 2.56
PCNX3-205ENST00000531280 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.55
PCNX3-205ENST00000531280 SMARCA4P51532 1647 aa30.89■■■□□ 2.54
PCNX3-205ENST00000531280 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
PCNX3-205ENST00000531280 BAZ1AQ9NRL2 1556 aaPredicted RBP30.81■■■□□ 2.52
PCNX3-205ENST00000531280 HMGXB3Q12766 1538 aa30.72■■■□□ 2.51
PCNX3-205ENST00000531280 MROH2BQ7Z745 1585 aa30.65■■■□□ 2.5
PCNX3-205ENST00000531280 PEG3Q9GZU2 1588 aa30.62■■■□□ 2.49
PCNX3-205ENST00000531280 BAZ1BQ9UIG0 1483 aaKnown RBP30.62■■■□□ 2.49
PCNX3-205ENST00000531280 ERCC6Q03468 1493 aa30.44■■■□□ 2.46
PCNX3-205ENST00000531280 NESP48681 1621 aa30.42■■■□□ 2.46
PCNX3-205ENST00000531280 CUX2O14529 1486 aa30.31■■■□□ 2.44
PCNX3-205ENST00000531280 WIZO95785 1651 aa30.23■■■□□ 2.43
PCNX3-205ENST00000531280 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.42
PCNX3-205ENST00000531280 DNAJC5Q9H3Z4 198 aa30.17■■■□□ 2.42
PCNX3-205ENST00000531280 RSF1Q96T23 1441 aaPredicted RBP30.15■■■□□ 2.42
PCNX3-205ENST00000531280 CADPSQ9ULU8 1353 aa30.13■■■□□ 2.41
PCNX3-205ENST00000531280 PDS5BQ9NTI5 1447 aa30.1■■■□□ 2.41
PCNX3-205ENST00000531280 THOC2Q8NI27 1593 aaKnown RBP29.95■■■□□ 2.39
PCNX3-205ENST00000531280 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
PCNX3-205ENST00000531280 TOP2AP11388 1531 aaKnown RBP29.86■■■□□ 2.37
PCNX3-205ENST00000531280 CFTRP13569 1480 aa29.8■■■□□ 2.36
PCNX3-205ENST00000531280 MRC2Q9UBG0 1479 aa29.76■■■□□ 2.35
PCNX3-205ENST00000531280 FANCD2Q9BXW9 1451 aa29.72■■■□□ 2.35
PCNX3-205ENST00000531280 CEP164Q9UPV0 1460 aa29.68■■■□□ 2.34
PCNX3-205ENST00000531280 WDR62O43379 1518 aa29.65■■■□□ 2.34
PCNX3-205ENST00000531280 CCDC88BA6NC98 1476 aa29.62■■■□□ 2.33
PCNX3-205ENST00000531280 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.31
PCNX3-205ENST00000531280 PRDM2Q13029 1718 aa29.29■■■□□ 2.28
PCNX3-205ENST00000531280 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
PCNX3-205ENST00000531280 ABCC8Q09428 1581 aa29.15■■■□□ 2.26
PCNX3-205ENST00000531280 IFT140Q96RY7 1462 aa29.12■■■□□ 2.25
PCNX3-205ENST00000531280 OSCARQ8IYS5 282 aa29.12■■■□□ 2.25
PCNX3-205ENST00000531280 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
PCNX3-205ENST00000531280 ZNF608Q9ULD9 1512 aaPredicted RBP29.06■■■□□ 2.24
PCNX3-205ENST00000531280 DNMBPQ6XZF7 1577 aa29.04■■■□□ 2.24
PCNX3-205ENST00000531280 POLA1P09884 1462 aaPredicted RBP28.89■■■□□ 2.22
PCNX3-205ENST00000531280 TRIM41Q8WV44 630 aa28.88■■■□□ 2.21
PCNX3-205ENST00000531280 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
PCNX3-205ENST00000531280 AQRO60306 1485 aaKnown RBP eCLIP28.86■■■□□ 2.218e-22■■■■■ 109.2
PCNX3-205ENST00000531280 SOGA1O94964 1423 aa28.84■■■□□ 2.21
PCNX3-205ENST00000531280 RAD54L2Q9Y4B4 1467 aa28.82■■■□□ 2.2
PCNX3-205ENST00000531280 EIF4G3O43432 1585 aaKnown RBP28.79■■■□□ 2.2
PCNX3-205ENST00000531280 CUX1P39880 1505 aa28.76■■■□□ 2.19
PCNX3-205ENST00000531280 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
PCNX3-205ENST00000531280 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
PCNX3-205ENST00000531280 FBLN2P98095 1184 aa28.66■■■□□ 2.18
PCNX3-205ENST00000531280 WDR97A6NE52 1622 aa28.54■■■□□ 2.16
PCNX3-205ENST00000531280 RIMBP3CA6NJZ7 1639 aa28.53■■■□□ 2.16
PCNX3-205ENST00000531280 RIMBP3BA6NNM3 1639 aa28.53■■■□□ 2.16
PCNX3-205ENST00000531280 RIMBP3Q9UFD9 1639 aa28.53■■■□□ 2.16
PCNX3-205ENST00000531280 CHD1O14646 1710 aa28.51■■■□□ 2.15
PCNX3-205ENST00000531280 ARHGEF11O15085 1522 aa28.5■■■□□ 2.15
PCNX3-205ENST00000531280 CHMP7Q8WUX9 453 aaPredicted RBP28.5■■■□□ 2.15
PCNX3-205ENST00000531280 GRIN2BQ13224 1484 aa28.5■■■□□ 2.15
PCNX3-205ENST00000531280 SNAPC4Q5SXM2 1469 aa28.5■■■□□ 2.15
PCNX3-205ENST00000531280 ABCA10Q8WWZ4 1543 aa28.45■■■□□ 2.15
PCNX3-205ENST00000531280 MAGI1Q96QZ7 1491 aaPredicted RBP28.45■■■□□ 2.14
PCNX3-205ENST00000531280 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
PCNX3-205ENST00000531280 WRNQ14191 1432 aaPredicted RBP eCLIP28.42■■■□□ 2.14
PCNX3-205ENST00000531280 CYB5RLQ6IPT4 315 aa28.41■■■□□ 2.14
PCNX3-205ENST00000531280 SYNJ2O15056 1496 aa28.36■■■□□ 2.13
PCNX3-205ENST00000531280 TOP2BQ02880 1626 aa28.33■■■□□ 2.13
PCNX3-205ENST00000531280 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
PCNX3-205ENST00000531280 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
PCNX3-205ENST00000531280 SYNJ1O43426 1573 aa28.29■■■□□ 2.12
PCNX3-205ENST00000531280 CLASP1Q7Z460 1538 aa28.27■■■□□ 2.12
PCNX3-205ENST00000531280 ARAP1Q96P48 1450 aa28.25■■■□□ 2.11
PCNX3-205ENST00000531280 PBRM1Q86U86 1689 aa28.25■■■□□ 2.11
PCNX3-205ENST00000531280 GRIN2AQ12879 1464 aa28.11■■■□□ 2.09
PCNX3-205ENST00000531280 FHAD1B1AJZ9 1412 aa28.1■■■□□ 2.09
PCNX3-205ENST00000531280 ERICH3Q5RHP9 1530 aa28.07■■■□□ 2.08
PCNX3-205ENST00000531280 ADAMTS12P58397 1594 aa28.05■■■□□ 2.08
PCNX3-205ENST00000531280 NUP160Q12769 1436 aa28.03■■■□□ 2.08
PCNX3-205ENST00000531280 TRHP20396 242 aaPredicted RBP27.98■■■□□ 2.07
PCNX3-205ENST00000531280 CEP170Q5SW79 1584 aa27.96■■■□□ 2.07
PCNX3-205ENST00000531280 IGF1RP08069 1367 aa27.91■■■□□ 2.06
PCNX3-205ENST00000531280 ERCC6L2Q5T890 1561 aa27.87■■■□□ 2.05
PCNX3-205ENST00000531280 JPH4Q96JJ6 628 aa27.87■■■□□ 2.05
PCNX3-205ENST00000531280 KIF27Q86VH2 1401 aa27.85■■■□□ 2.05
PCNX3-205ENST00000531280 SHROOM2Q13796 1616 aa27.81■■■□□ 2.04
PCNX3-205ENST00000531280 PRG4Q92954 1404 aaPredicted RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms