RNA–Protein interactions for RNA: ENST00000253382.5

ACSS2-201, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

TSL 2 BASIC

Gene ACSS2, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-201ENST00000253382 NISCHQ9Y2I1 1504 aa38.34■■■■□ 3.73
ACSS2-201ENST00000253382 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
ACSS2-201ENST00000253382 DCAF8L2P0C7V8 631 aa32.62■■■□□ 2.81
ACSS2-201ENST00000253382 CCDC180Q9P1Z9 1646 aa32.58■■■□□ 2.81
ACSS2-201ENST00000253382 ZCCHC6Q5VYS8 1495 aaKnown RBP32.26■■■□□ 2.75
ACSS2-201ENST00000253382 SUPT5HO00267 1087 aaKnown RBP31.9■■■□□ 2.7
ACSS2-201ENST00000253382 ABCC9O60706 1549 aa31.25■■■□□ 2.59
ACSS2-201ENST00000253382 DCAF1Q9Y4B6 1507 aa31.2■■■□□ 2.59
ACSS2-201ENST00000253382 SCRIBQ14160 1630 aa30.85■■■□□ 2.53
ACSS2-201ENST00000253382 CHIC1Q5VXU3 224 aa30.5■■■□□ 2.47
ACSS2-201ENST00000253382 MYO15BQ96JP2 1530 aa30.47■■■□□ 2.47
ACSS2-201ENST00000253382 NACADO15069 1562 aa30.4■■■□□ 2.46
ACSS2-201ENST00000253382 RSF1Q96T23 1441 aaPredicted RBP30.23■■■□□ 2.43
ACSS2-201ENST00000253382 CECR2Q9BXF3 1484 aa30.16■■■□□ 2.42
ACSS2-201ENST00000253382 RB1CC1Q8TDY2 1594 aa30.08■■■□□ 2.41
ACSS2-201ENST00000253382 PABPN1Q86U42 306 aaKnown RBP eCLIP29.96■■■□□ 2.396e-7■■□□□ 12.5
ACSS2-201ENST00000253382 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
ACSS2-201ENST00000253382 LOC105371045A0A1W2PR82 267 aa29.81■■■□□ 2.36
ACSS2-201ENST00000253382 WIZO95785 1651 aa29.68■■■□□ 2.34
ACSS2-201ENST00000253382 TRIM41Q8WV44 630 aa29.59■■■□□ 2.33
ACSS2-201ENST00000253382 FAM9AQ8IZU1 332 aaPredicted RBP29.59■■■□□ 2.33
ACSS2-201ENST00000253382 UNC13AQ9UPW8 1703 aa29.58■■■□□ 2.33
ACSS2-201ENST00000253382 EHMT2Q96KQ7 1210 aa29.56■■■□□ 2.32
ACSS2-201ENST00000253382 BAZ1AQ9NRL2 1556 aaPredicted RBP29.44■■■□□ 2.3
ACSS2-201ENST00000253382 BICRAQ9NZM4 1560 aa29.34■■■□□ 2.29
ACSS2-201ENST00000253382 SMARCA4P51532 1647 aa29.28■■■□□ 2.28
ACSS2-201ENST00000253382 PCGF6Q9BYE7 350 aa29.14■■■□□ 2.26
ACSS2-201ENST00000253382 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
ACSS2-201ENST00000253382 TOP2AP11388 1531 aaKnown RBP29.06■■■□□ 2.24
ACSS2-201ENST00000253382 SMARCA2P51531 1590 aa28.94■■■□□ 2.22
ACSS2-201ENST00000253382 ABCC8Q09428 1581 aa28.92■■■□□ 2.22
ACSS2-201ENST00000253382 EIF4G1Q04637 1599 aaKnown RBP28.79■■■□□ 2.2
ACSS2-201ENST00000253382 ATAD2BQ9ULI0 1458 aa28.77■■■□□ 2.2
ACSS2-201ENST00000253382 BAZ1BQ9UIG0 1483 aaKnown RBP28.68■■■□□ 2.18
ACSS2-201ENST00000253382 PPARGC1BQ86YN6 1023 aaKnown RBP28.67■■■□□ 2.18
ACSS2-201ENST00000253382 PEG3Q9GZU2 1588 aa28.59■■■□□ 2.17
ACSS2-201ENST00000253382 SOGA1O94964 1423 aa28.58■■■□□ 2.17
ACSS2-201ENST00000253382 RUSC2Q8N2Y8 1516 aa28.5■■■□□ 2.15
ACSS2-201ENST00000253382 HRCP23327 699 aa28.48■■■□□ 2.15
ACSS2-201ENST00000253382 TRIM26Q12899 539 aaPredicted RBP28.47■■■□□ 2.15
ACSS2-201ENST00000253382 WRNQ14191 1432 aaPredicted RBP eCLIP28.42■■■□□ 2.14
ACSS2-201ENST00000253382 TTBK1Q5TCY1 1321 aaPredicted RBP28.38■■■□□ 2.13
ACSS2-201ENST00000253382 UBTFP17480 764 aaKnown RBP28.35■■■□□ 2.13
ACSS2-201ENST00000253382 CSRNP3Q8WYN3 585 aa28.35■■■□□ 2.13
ACSS2-201ENST00000253382 SYNJ1O43426 1573 aa28.26■■■□□ 2.11
ACSS2-201ENST00000253382 NCAPD3P42695 1498 aa28.23■■■□□ 2.11
ACSS2-201ENST00000253382 RANGAP1P46060 587 aaPredicted RBP28.23■■■□□ 2.11
ACSS2-201ENST00000253382 CEP162Q5TB80 1403 aa28.07■■■□□ 2.08
ACSS2-201ENST00000253382 HMGXB3Q12766 1538 aa28.06■■■□□ 2.08
ACSS2-201ENST00000253382 EEA1Q15075 1411 aa27.98■■■□□ 2.07
ACSS2-201ENST00000253382 TNIKQ9UKE5 1360 aa27.97■■■□□ 2.07
ACSS2-201ENST00000253382 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
ACSS2-201ENST00000253382 GOLGA3Q08378 1498 aa27.91■■■□□ 2.06
ACSS2-201ENST00000253382 CFTRP13569 1480 aa27.88■■■□□ 2.05
ACSS2-201ENST00000253382 DNAJC5BQ9UF47 199 aa27.87■■■□□ 2.05
ACSS2-201ENST00000253382 RAPGEF2Q9Y4G8 1499 aa27.85■■■□□ 2.05
ACSS2-201ENST00000253382 TOP2BQ02880 1626 aa27.83■■■□□ 2.05
ACSS2-201ENST00000253382 CUX1P39880 1505 aa27.83■■■□□ 2.05
ACSS2-201ENST00000253382 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
ACSS2-201ENST00000253382 CADPSQ9ULU8 1353 aa27.77■■■□□ 2.04
ACSS2-201ENST00000253382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.73■■■□□ 2.03
ACSS2-201ENST00000253382 CLIP1P30622 1438 aa27.69■■■□□ 2.02
ACSS2-201ENST00000253382 NESP48681 1621 aa27.65■■■□□ 2.02
ACSS2-201ENST00000253382 BIVM-ERCC5R4GMW8 1640 aa27.65■■■□□ 2.02
ACSS2-201ENST00000253382 KIF21BO75037 1637 aa27.61■■■□□ 2.01
ACSS2-201ENST00000253382 KIF27Q86VH2 1401 aa27.57■■■□□ 2
ACSS2-201ENST00000253382 CUX2O14529 1486 aa27.52■■■□□ 2
ACSS2-201ENST00000253382 CCER1Q8TC90 406 aaPredicted RBP27.51■■■□□ 2
ACSS2-201ENST00000253382 FANCD2Q9BXW9 1451 aa27.51■■□□□ 1.99
ACSS2-201ENST00000253382 PRXQ9BXM0 1461 aa27.49■■□□□ 1.99
ACSS2-201ENST00000253382 APLP2Q06481 763 aa27.47■■□□□ 1.99
ACSS2-201ENST00000253382 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
ACSS2-201ENST00000253382 HNRNPUL2Q1KMD3 747 aaKnown RBP27.44■■□□□ 1.98
ACSS2-201ENST00000253382 ZEB1P37275 1124 aaPredicted RBP27.4■■□□□ 1.98
ACSS2-201ENST00000253382 IGF1RP08069 1367 aa27.4■■□□□ 1.98
ACSS2-201ENST00000253382 VPS8Q8N3P4 1428 aa27.39■■□□□ 1.98
ACSS2-201ENST00000253382 RAD54L2Q9Y4B4 1467 aa27.39■■□□□ 1.98
ACSS2-201ENST00000253382 P3H3Q8IVL6 736 aa27.31■■□□□ 1.96
ACSS2-201ENST00000253382 PRDM2Q13029 1718 aa27.29■■□□□ 1.96
ACSS2-201ENST00000253382 CARMIL1Q5VZK9 1371 aa27.29■■□□□ 1.96
ACSS2-201ENST00000253382 KANK4Q5T7N3 995 aaPredicted RBP27.28■■□□□ 1.96
ACSS2-201ENST00000253382 ERICH3Q5RHP9 1530 aa27.27■■□□□ 1.96
ACSS2-201ENST00000253382 ARAP1Q96P48 1450 aa27.26■■□□□ 1.95
ACSS2-201ENST00000253382 TOPBP1Q92547 1522 aa27.22■■□□□ 1.95
ACSS2-201ENST00000253382 POLA1P09884 1462 aaPredicted RBP27.2■■□□□ 1.95
ACSS2-201ENST00000253382 ATP1B4Q9UN42 357 aaPredicted RBP27.18■■□□□ 1.94
ACSS2-201ENST00000253382 TDRD9Q8NDG6 1382 aaKnown RBP27.18■■□□□ 1.94
ACSS2-201ENST00000253382 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
ACSS2-201ENST00000253382 ARHGAP35Q9NRY4 1499 aa27.13■■□□□ 1.93
ACSS2-201ENST00000253382 DNMBPQ6XZF7 1577 aa27.11■■□□□ 1.93
ACSS2-201ENST00000253382 ITGAEP38570 1179 aa27.05■■□□□ 1.92
ACSS2-201ENST00000253382 PDS5BQ9NTI5 1447 aa27.04■■□□□ 1.92
ACSS2-201ENST00000253382 LAMC3Q9Y6N6 1575 aa27.03■■□□□ 1.92
ACSS2-201ENST00000253382 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
ACSS2-201ENST00000253382 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
ACSS2-201ENST00000253382 FHOD3Q2V2M9 1422 aa26.89■■□□□ 1.9
ACSS2-201ENST00000253382 GAPVD1Q14C86 1478 aa26.84■■□□□ 1.89
ACSS2-201ENST00000253382 AQRO60306 1485 aaKnown RBP eCLIP26.81■■□□□ 1.882e-8■■■■■ 48.1
ACSS2-201ENST00000253382 FAM50AQ14320 339 aaKnown RBP26.71■■□□□ 1.87
ACSS2-201ENST00000253382 ARID3CA6NKF2 412 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms