RNA–Protein interactions for RNA: ENST00000476716.5

USP34-212, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 4

Gene USP34, Length 606 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-212ENST00000476716 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
USP34-212ENST00000476716 CHIC1Q5VXU3 224 aa26.98■■□□□ 1.91
USP34-212ENST00000476716 SENP3Q9H4L4 574 aaPredicted RBP24.26■■□□□ 1.47
USP34-212ENST00000476716 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
USP34-212ENST00000476716 FOXD1Q16676 465 aa22.54■■□□□ 1.2
USP34-212ENST00000476716 PLPPR3Q6T4P5 718 aa21.64■■□□□ 1.05
USP34-212ENST00000476716 MSH5O43196 834 aa21.17■□□□□ 0.98
USP34-212ENST00000476716 PIAS4Q8N2W9 510 aaPredicted RBP21.15■□□□□ 0.98
USP34-212ENST00000476716 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
USP34-212ENST00000476716 ADRA2BP18089 450 aa21.06■□□□□ 0.96
USP34-212ENST00000476716 POTEDQ86YR6 584 aa20.52■□□□□ 0.88
USP34-212ENST00000476716 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
USP34-212ENST00000476716 MAPK8IP2Q13387 824 aaPredicted RBP19.3■□□□□ 0.68
USP34-212ENST00000476716 DMRT2Q9Y5R5 561 aa19.21■□□□□ 0.67
USP34-212ENST00000476716 PPP4R3CPQ6ZMV5 832 aa18.95■□□□□ 0.62
USP34-212ENST00000476716 CNKSR2Q8WXI2 1034 aa18.6■□□□□ 0.57
USP34-212ENST00000476716 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
USP34-212ENST00000476716 HOXD11P31277 338 aaPredicted RBP18.49■□□□□ 0.55
USP34-212ENST00000476716 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
USP34-212ENST00000476716 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
USP34-212ENST00000476716 CACNB1Q02641 598 aaPredicted RBP18.15■□□□□ 0.5
USP34-212ENST00000476716 RNF39Q9H2S5 420 aa18■□□□□ 0.47
USP34-212ENST00000476716 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
USP34-212ENST00000476716 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
USP34-212ENST00000476716 C1QBPQ07021 282 aaKnown RBP17.79■□□□□ 0.44
USP34-212ENST00000476716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.73■□□□□ 0.43
USP34-212ENST00000476716 KCNA4P22459 653 aa17.64■□□□□ 0.41
USP34-212ENST00000476716 U3KPZ7 1027 aaPredicted RBP17.27■□□□□ 0.36
USP34-212ENST00000476716 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
USP34-212ENST00000476716 CAPN15O75808 1086 aa17.07■□□□□ 0.32
USP34-212ENST00000476716 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
USP34-212ENST00000476716 APLP2Q06481 763 aa16.95■□□□□ 0.3
USP34-212ENST00000476716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
USP34-212ENST00000476716 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
USP34-212ENST00000476716 DSG3P32926 999 aa16.87■□□□□ 0.29
USP34-212ENST00000476716 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
USP34-212ENST00000476716 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
USP34-212ENST00000476716 ZNF219Q9P2Y4 722 aaPredicted RBP16.77■□□□□ 0.28
USP34-212ENST00000476716 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
USP34-212ENST00000476716 ABCB7O75027 752 aa16.65■□□□□ 0.26
USP34-212ENST00000476716 MYCNP04198 464 aaPredicted RBP16.65■□□□□ 0.26
USP34-212ENST00000476716 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
USP34-212ENST00000476716 POLA2Q14181 598 aa16.33■□□□□ 0.2
USP34-212ENST00000476716 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
USP34-212ENST00000476716 ATF5Q9Y2D1 282 aaPredicted RBP16.17■□□□□ 0.18
USP34-212ENST00000476716 ZBTB22O15209 634 aa16.16■□□□□ 0.18
USP34-212ENST00000476716 POTEHQ6S545 545 aa16.12■□□□□ 0.17
USP34-212ENST00000476716 ZBTB12Q9Y330 459 aaPredicted RBP16.06■□□□□ 0.16
USP34-212ENST00000476716 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
USP34-212ENST00000476716 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
USP34-212ENST00000476716 CHRDL2Q6WN34 429 aa15.78■□□□□ 0.12
USP34-212ENST00000476716 AKT1S1Q96B36 256 aa15.78■□□□□ 0.12
USP34-212ENST00000476716 FBLN2P98095 1184 aa15.7■□□□□ 0.1
USP34-212ENST00000476716 REM2Q8IYK8 340 aaPredicted RBP15.61■□□□□ 0.09
USP34-212ENST00000476716 SPDYE2BA6NHP3 402 aa15.52■□□□□ 0.08
USP34-212ENST00000476716 SPDYE6P0CI01 402 aa15.52■□□□□ 0.08
USP34-212ENST00000476716 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.08
USP34-212ENST00000476716 CSRNP3Q8WYN3 585 aa15.49■□□□□ 0.07
USP34-212ENST00000476716 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
USP34-212ENST00000476716 MKRN4PQ13434 485 aaPredicted RBP15.43■□□□□ 0.06
USP34-212ENST00000476716 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
USP34-212ENST00000476716 PIP4P2Q8N4L2 257 aa15.37■□□□□ 0.05
USP34-212ENST00000476716 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
USP34-212ENST00000476716 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.049e-7■□□□□ 10.4
USP34-212ENST00000476716 SPDYE1Q8NFV5 336 aaPredicted RBP15.26■□□□□ 0.03
USP34-212ENST00000476716 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
USP34-212ENST00000476716 SSUH2Q9Y2M2 353 aa15.26■□□□□ 0.03
USP34-212ENST00000476716 HAX1O00165 279 aa15.17■□□□□ 0.02
USP34-212ENST00000476716 SP7Q8TDD2 431 aaPredicted RBP15.14■□□□□ 0.01
USP34-212ENST00000476716 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
USP34-212ENST00000476716 PRKAR2AP13861 404 aaKnown RBP15.08■□□□□ 0
USP34-212ENST00000476716 PRR29P0C7W0 189 aa15□□□□□ -0.01
USP34-212ENST00000476716 CHADLQ6NUI6 762 aa14.9□□□□□ -0.02
USP34-212ENST00000476716 EVX2Q03828 476 aa14.85□□□□□ -0.03
USP34-212ENST00000476716 SPDYE4A6NLX3 237 aa14.82□□□□□ -0.04
USP34-212ENST00000476716 C19orf67A6NJJ6 358 aa14.79□□□□□ -0.04
USP34-212ENST00000476716 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
USP34-212ENST00000476716 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
USP34-212ENST00000476716 CD44P16070 742 aaKnown RBP14.62□□□□□ -0.07
USP34-212ENST00000476716 GABBR2O75899 941 aa14.58□□□□□ -0.08
USP34-212ENST00000476716 CREBZFQ9NS37 354 aa14.55□□□□□ -0.08
USP34-212ENST00000476716 CLCN6P51797 869 aa14.43□□□□□ -0.1
USP34-212ENST00000476716 ZRANB1Q9UGI0 708 aa14.43□□□□□ -0.1
USP34-212ENST00000476716 PAK3O75914 559 aaPredicted RBP14.39□□□□□ -0.11
USP34-212ENST00000476716 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.11
USP34-212ENST00000476716 PROM2Q8N271 834 aa14.37□□□□□ -0.11
USP34-212ENST00000476716 ZNF579Q8NAF0 562 aaKnown RBP14.35□□□□□ -0.11
USP34-212ENST00000476716 DCBLD2Q96PD2 775 aa14.29□□□□□ -0.12
USP34-212ENST00000476716 MNX1P50219 401 aaPredicted RBP14.27□□□□□ -0.13
USP34-212ENST00000476716 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
USP34-212ENST00000476716 LHX8Q68G74 356 aa14.21□□□□□ -0.13
USP34-212ENST00000476716 POTEIP0CG38 1075 aa14.2□□□□□ -0.14
USP34-212ENST00000476716 MIER1Q8N108 512 aa14.19□□□□□ -0.14
USP34-212ENST00000476716 PHF12Q96QT6 1004 aa14.18□□□□□ -0.14
USP34-212ENST00000476716 GALR2O43603 387 aaPredicted RBP14.16□□□□□ -0.14
USP34-212ENST00000476716 FKBP8Q14318 412 aa14.12□□□□□ -0.15
USP34-212ENST00000476716 TSPYL2Q9H2G4 693 aaPredicted RBP14.11□□□□□ -0.15
USP34-212ENST00000476716 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
USP34-212ENST00000476716 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
USP34-212ENST00000476716 MS4A3Q96HJ5 214 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms