RNA–Protein interactions for RNA: ENST00000319584.11

ARID1B-201, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 2

Gene ARID1B, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-201ENST00000319584 NISCHQ9Y2I1 1504 aa26.92■■□□□ 1.9
ARID1B-201ENST00000319584 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
ARID1B-201ENST00000319584 SHROOM4Q9ULL8 1493 aa22.9■■□□□ 1.26
ARID1B-201ENST00000319584 ZCCHC6Q5VYS8 1495 aaKnown RBP22.75■■□□□ 1.23
ARID1B-201ENST00000319584 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
ARID1B-201ENST00000319584 DCAF8L2P0C7V8 631 aa22.35■■□□□ 1.17
ARID1B-201ENST00000319584 DCAF1Q9Y4B6 1507 aa22.05■■□□□ 1.12
ARID1B-201ENST00000319584 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
ARID1B-201ENST00000319584 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
ARID1B-201ENST00000319584 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
ARID1B-201ENST00000319584 ABCC9O60706 1549 aa21.45■■□□□ 1.02
ARID1B-201ENST00000319584 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
ARID1B-201ENST00000319584 NACADO15069 1562 aa21.21■□□□□ 0.99
ARID1B-201ENST00000319584 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
ARID1B-201ENST00000319584 RB1CC1Q8TDY2 1594 aa21.06■□□□□ 0.96
ARID1B-201ENST00000319584 CECR2Q9BXF3 1484 aa21.05■□□□□ 0.96
ARID1B-201ENST00000319584 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
ARID1B-201ENST00000319584 PCGF6Q9BYE7 350 aa20.9■□□□□ 0.94
ARID1B-201ENST00000319584 WIZO95785 1651 aa20.86■□□□□ 0.93
ARID1B-201ENST00000319584 TRIM41Q8WV44 630 aa20.81■□□□□ 0.92
ARID1B-201ENST00000319584 HRCP23327 699 aa20.78■□□□□ 0.92
ARID1B-201ENST00000319584 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
ARID1B-201ENST00000319584 FAM9AQ8IZU1 332 aaPredicted RBP20.69■□□□□ 0.9
ARID1B-201ENST00000319584 BAZ1AQ9NRL2 1556 aaPredicted RBP20.67■□□□□ 0.9
ARID1B-201ENST00000319584 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
ARID1B-201ENST00000319584 SMARCA4P51532 1647 aa20.54■□□□□ 0.88
ARID1B-201ENST00000319584 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
ARID1B-201ENST00000319584 TRIM26Q12899 539 aaPredicted RBP20.48■□□□□ 0.87
ARID1B-201ENST00000319584 TOP2AP11388 1531 aaKnown RBP20.47■□□□□ 0.87
ARID1B-201ENST00000319584 PPARGC1BQ86YN6 1023 aaKnown RBP20.46■□□□□ 0.87
ARID1B-201ENST00000319584 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
ARID1B-201ENST00000319584 BICRAQ9NZM4 1560 aa20.41■□□□□ 0.86
ARID1B-201ENST00000319584 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
ARID1B-201ENST00000319584 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
ARID1B-201ENST00000319584 ABCC8Q09428 1581 aa20.35■□□□□ 0.85
ARID1B-201ENST00000319584 PEG3Q9GZU2 1588 aa20.13■□□□□ 0.81
ARID1B-201ENST00000319584 SOGA1O94964 1423 aa20.11■□□□□ 0.81
ARID1B-201ENST00000319584 RUSC2Q8N2Y8 1516 aa20.05■□□□□ 0.8
ARID1B-201ENST00000319584 ATAD2BQ9ULI0 1458 aa20.03■□□□□ 0.8
ARID1B-201ENST00000319584 BAZ1BQ9UIG0 1483 aaKnown RBP19.95■□□□□ 0.78
ARID1B-201ENST00000319584 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.78
ARID1B-201ENST00000319584 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
ARID1B-201ENST00000319584 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
ARID1B-201ENST00000319584 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
ARID1B-201ENST00000319584 ZEB1P37275 1124 aaPredicted RBP19.9■□□□□ 0.78
ARID1B-201ENST00000319584 EEA1Q15075 1411 aa19.88■□□□□ 0.77
ARID1B-201ENST00000319584 TNIKQ9UKE5 1360 aa19.88■□□□□ 0.77
ARID1B-201ENST00000319584 UBTFP17480 764 aaKnown RBP19.84■□□□□ 0.77
ARID1B-201ENST00000319584 TTBK1Q5TCY1 1321 aaPredicted RBP19.84■□□□□ 0.77
ARID1B-201ENST00000319584 GOLGA3Q08378 1498 aa19.78■□□□□ 0.76
ARID1B-201ENST00000319584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
ARID1B-201ENST00000319584 CEP164Q9UPV0 1460 aa19.69■□□□□ 0.74
ARID1B-201ENST00000319584 KIF21BO75037 1637 aa19.69■□□□□ 0.74
ARID1B-201ENST00000319584 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
ARID1B-201ENST00000319584 NCAPD3P42695 1498 aa19.64■□□□□ 0.73
ARID1B-201ENST00000319584 CCER1Q8TC90 406 aaPredicted RBP19.63■□□□□ 0.73
ARID1B-201ENST00000319584 HMGXB3Q12766 1538 aa19.62■□□□□ 0.73
ARID1B-201ENST00000319584 RAPGEF2Q9Y4G8 1499 aa19.62■□□□□ 0.73
ARID1B-201ENST00000319584 BIVM-ERCC5R4GMW8 1640 aa19.59■□□□□ 0.73
ARID1B-201ENST00000319584 CLIP1P30622 1438 aa19.57■□□□□ 0.72
ARID1B-201ENST00000319584 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
ARID1B-201ENST00000319584 CUX1P39880 1505 aa19.51■□□□□ 0.71
ARID1B-201ENST00000319584 VPS8Q8N3P4 1428 aa19.46■□□□□ 0.71
ARID1B-201ENST00000319584 CFTRP13569 1480 aa19.46■□□□□ 0.71
ARID1B-201ENST00000319584 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
ARID1B-201ENST00000319584 ERICH3Q5RHP9 1530 aa19.37■□□□□ 0.69
ARID1B-201ENST00000319584 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
ARID1B-201ENST00000319584 PRDM2Q13029 1718 aa19.33■□□□□ 0.68
ARID1B-201ENST00000319584 KIF27Q86VH2 1401 aa19.33■□□□□ 0.68
ARID1B-201ENST00000319584 APLP2Q06481 763 aa19.31■□□□□ 0.68
ARID1B-201ENST00000319584 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
ARID1B-201ENST00000319584 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
ARID1B-201ENST00000319584 CADPSQ9ULU8 1353 aa19.25■□□□□ 0.67
ARID1B-201ENST00000319584 KANK4Q5T7N3 995 aaPredicted RBP19.2■□□□□ 0.66
ARID1B-201ENST00000319584 CUX2O14529 1486 aa19.2■□□□□ 0.66
ARID1B-201ENST00000319584 DIEXFQ68CQ4 756 aaKnown RBP19.18■□□□□ 0.66
ARID1B-201ENST00000319584 IGF1RP08069 1367 aa19.17■□□□□ 0.66
ARID1B-201ENST00000319584 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
ARID1B-201ENST00000319584 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
ARID1B-201ENST00000319584 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
ARID1B-201ENST00000319584 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.65
ARID1B-201ENST00000319584 ZNF316A6NFI3 1004 aaPredicted RBP19.06■□□□□ 0.64
ARID1B-201ENST00000319584 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
ARID1B-201ENST00000319584 NESP48681 1621 aa19.05■□□□□ 0.64
ARID1B-201ENST00000319584 RAD54L2Q9Y4B4 1467 aa19.01■□□□□ 0.63
ARID1B-201ENST00000319584 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
ARID1B-201ENST00000319584 DNMBPQ6XZF7 1577 aa18.97■□□□□ 0.63
ARID1B-201ENST00000319584 NEUROD1Q13562 356 aa18.96■□□□□ 0.63
ARID1B-201ENST00000319584 TOPBP1Q92547 1522 aa18.96■□□□□ 0.63
ARID1B-201ENST00000319584 DHX57Q6P158 1386 aaKnown RBP18.95■□□□□ 0.62
ARID1B-201ENST00000319584 POLA1P09884 1462 aaPredicted RBP18.95■□□□□ 0.62
ARID1B-201ENST00000319584 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
ARID1B-201ENST00000319584 CCNB3Q8WWL7 1395 aa18.92■□□□□ 0.62
ARID1B-201ENST00000319584 TIAM1Q13009 1591 aa18.92■□□□□ 0.62
ARID1B-201ENST00000319584 P3H3Q8IVL6 736 aa18.92■□□□□ 0.62
ARID1B-201ENST00000319584 ABCA10Q8WWZ4 1543 aa18.91■□□□□ 0.62
ARID1B-201ENST00000319584 ITGAEP38570 1179 aa18.9■□□□□ 0.62
ARID1B-201ENST00000319584 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
ARID1B-201ENST00000319584 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
ARID1B-201ENST00000319584 LRRC9Q6ZRR7 1453 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms