RNA–Protein interactions for RNA: ENST00000556530.1

PNN-205, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2 BASIC

Gene PNN, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-205ENST00000556530 NISCHQ9Y2I1 1504 aa47.27■■■■■ 5.16
PNN-205ENST00000556530 CCDC180Q9P1Z9 1646 aa41.84■■■■■ 4.29
PNN-205ENST00000556530 ABCC9O60706 1549 aa40.79■■■■■ 4.12
PNN-205ENST00000556530 DCAF8L2P0C7V8 631 aa39.64■■■■□ 3.94
PNN-205ENST00000556530 ZCCHC6Q5VYS8 1495 aaKnown RBP39.42■■■■□ 3.9
PNN-205ENST00000556530 NACADO15069 1562 aa39.29■■■■□ 3.88
PNN-205ENST00000556530 RB1CC1Q8TDY2 1594 aa39.29■■■■□ 3.88
PNN-205ENST00000556530 MYO15BQ96JP2 1530 aa39.05■■■■□ 3.84
PNN-205ENST00000556530 DCAF1Q9Y4B6 1507 aa39.04■■■■□ 3.84
PNN-205ENST00000556530 UNC13AQ9UPW8 1703 aa38.43■■■■□ 3.74
PNN-205ENST00000556530 SCRIBQ14160 1630 aa38.34■■■■□ 3.73
PNN-205ENST00000556530 PABPN1Q86U42 306 aaKnown RBP eCLIP38.24■■■■□ 3.713e-6■■□□□ 12.4
PNN-205ENST00000556530 BICRAQ9NZM4 1560 aa38.06■■■■□ 3.68
PNN-205ENST00000556530 SHROOM4Q9ULL8 1493 aa37.74■■■■□ 3.63
PNN-205ENST00000556530 DNAJC5BQ9UF47 199 aa37.16■■■■□ 3.54
PNN-205ENST00000556530 EIF4G1Q04637 1599 aaKnown RBP37.05■■■■□ 3.52
PNN-205ENST00000556530 CC2D2AQ9P2K1 1620 aa36.86■■■■□ 3.49
PNN-205ENST00000556530 CECR2Q9BXF3 1484 aa36.86■■■■□ 3.49
PNN-205ENST00000556530 SMARCA4P51532 1647 aa36.63■■■■□ 3.45
PNN-205ENST00000556530 BAZ1AQ9NRL2 1556 aaPredicted RBP36.61■■■■□ 3.45
PNN-205ENST00000556530 MROH2BQ7Z745 1585 aa36.48■■■■□ 3.43
PNN-205ENST00000556530 ATAD2BQ9ULI0 1458 aa36.35■■■■□ 3.41
PNN-205ENST00000556530 SMARCA2P51531 1590 aa36.3■■■■□ 3.4
PNN-205ENST00000556530 NCAPD3P42695 1498 aa36.24■■■■□ 3.39
PNN-205ENST00000556530 PEG3Q9GZU2 1588 aa36.18■■■■□ 3.38
PNN-205ENST00000556530 RSF1Q96T23 1441 aaPredicted RBP36.17■■■■□ 3.38
PNN-205ENST00000556530 WIZO95785 1651 aa36.14■■■■□ 3.38
PNN-205ENST00000556530 BAZ1BQ9UIG0 1483 aaKnown RBP36.1■■■■□ 3.37
PNN-205ENST00000556530 HMGXB3Q12766 1538 aa36.07■■■■□ 3.36
PNN-205ENST00000556530 TOP2AP11388 1531 aaKnown RBP35.71■■■■□ 3.31
PNN-205ENST00000556530 SUPT5HO00267 1087 aaKnown RBP35.69■■■■□ 3.3
PNN-205ENST00000556530 NESP48681 1621 aa35.38■■■■□ 3.25
PNN-205ENST00000556530 CCDC88BA6NC98 1476 aa35.33■■■■□ 3.25
PNN-205ENST00000556530 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
PNN-205ENST00000556530 LAMC3Q9Y6N6 1575 aa35.24■■■■□ 3.23
PNN-205ENST00000556530 ERCC6Q03468 1493 aa35.14■■■■□ 3.22
PNN-205ENST00000556530 CFTRP13569 1480 aa35.07■■■■□ 3.2
PNN-205ENST00000556530 PDS5BQ9NTI5 1447 aa35.04■■■■□ 3.2
PNN-205ENST00000556530 KIF21AQ7Z4S6 1674 aa34.95■■■■□ 3.19
PNN-205ENST00000556530 FANCD2Q9BXW9 1451 aa34.87■■■■□ 3.17
PNN-205ENST00000556530 PRDM2Q13029 1718 aa34.85■■■■□ 3.17
PNN-205ENST00000556530 CEP164Q9UPV0 1460 aa34.78■■■■□ 3.16
PNN-205ENST00000556530 THOC2Q8NI27 1593 aaKnown RBP34.69■■■■□ 3.14
PNN-205ENST00000556530 MRC2Q9UBG0 1479 aa34.66■■■■□ 3.14
PNN-205ENST00000556530 CUX2O14529 1486 aa34.53■■■■□ 3.12
PNN-205ENST00000556530 WDR62O43379 1518 aa34.5■■■■□ 3.11
PNN-205ENST00000556530 URB2Q14146 1524 aaKnown RBP34.49■■■■□ 3.11
PNN-205ENST00000556530 TOPBP1Q92547 1522 aa34.34■■■■□ 3.09
PNN-205ENST00000556530 ABCC8Q09428 1581 aa34.31■■■■□ 3.08
PNN-205ENST00000556530 DNMBPQ6XZF7 1577 aa34.3■■■■□ 3.08
PNN-205ENST00000556530 CUX1P39880 1505 aa34.2■■■■□ 3.06
PNN-205ENST00000556530 WRNQ14191 1432 aaPredicted RBP eCLIP34.11■■■■□ 3.05
PNN-205ENST00000556530 POLA1P09884 1462 aaPredicted RBP34.05■■■■□ 3.04
PNN-205ENST00000556530 FGD5Q6ZNL6 1462 aa34.05■■■■□ 3.04
PNN-205ENST00000556530 IFT140Q96RY7 1462 aa34.02■■■■□ 3.04
PNN-205ENST00000556530 SYNJ1O43426 1573 aa34.01■■■■□ 3.03
PNN-205ENST00000556530 SOGA1O94964 1423 aa33.97■■■■□ 3.03
PNN-205ENST00000556530 RAD54L2Q9Y4B4 1467 aa33.97■■■■□ 3.03
PNN-205ENST00000556530 TOP2BQ02880 1626 aa33.96■■■■□ 3.03
PNN-205ENST00000556530 BIVM-ERCC5R4GMW8 1640 aa33.94■■■■□ 3.02
PNN-205ENST00000556530 TARBP1Q13395 1621 aaKnown RBP33.9■■■■□ 3.02
PNN-205ENST00000556530 ZNF608Q9ULD9 1512 aaPredicted RBP33.89■■■■□ 3.02
PNN-205ENST00000556530 TDRD9Q8NDG6 1382 aaKnown RBP33.77■■■■□ 3
PNN-205ENST00000556530 AQRO60306 1485 aaKnown RBP eCLIP33.76■■■■□ 33e-18■■■■■ 28.1
PNN-205ENST00000556530 EIF4G3O43432 1585 aaKnown RBP33.73■■■□□ 2.99
PNN-205ENST00000556530 WDR97A6NE52 1622 aa33.68■■■□□ 2.98
PNN-205ENST00000556530 ABCA10Q8WWZ4 1543 aa33.68■■■□□ 2.98
PNN-205ENST00000556530 TRIM41Q8WV44 630 aa33.63■■■□□ 2.97
PNN-205ENST00000556530 GAPVD1Q14C86 1478 aa33.56■■■□□ 2.96
PNN-205ENST00000556530 ABCA5Q8WWZ7 1642 aa33.51■■■□□ 2.96
PNN-205ENST00000556530 GRIN2BQ13224 1484 aa33.5■■■□□ 2.95
PNN-205ENST00000556530 PBRM1Q86U86 1689 aa33.47■■■□□ 2.95
PNN-205ENST00000556530 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
PNN-205ENST00000556530 FBLN2P98095 1184 aa33.41■■■□□ 2.94
PNN-205ENST00000556530 CHIC1Q5VXU3 224 aa33.4■■■□□ 2.94
PNN-205ENST00000556530 KIF27Q86VH2 1401 aa33.37■■■□□ 2.93
PNN-205ENST00000556530 MAGI1Q96QZ7 1491 aaPredicted RBP33.34■■■□□ 2.93
PNN-205ENST00000556530 CHMP7Q8WUX9 453 aaPredicted RBP33.3■■■□□ 2.92
PNN-205ENST00000556530 CHD1O14646 1710 aa33.29■■■□□ 2.92
PNN-205ENST00000556530 OSCARQ8IYS5 282 aa33.28■■■□□ 2.92
PNN-205ENST00000556530 ERICH3Q5RHP9 1530 aa33.28■■■□□ 2.92
PNN-205ENST00000556530 SYNJ2O15056 1496 aa33.23■■■□□ 2.91
PNN-205ENST00000556530 RUSC2Q8N2Y8 1516 aa33.23■■■□□ 2.91
PNN-205ENST00000556530 IGF1RP08069 1367 aa33.2■■■□□ 2.9
PNN-205ENST00000556530 ADAMTS12P58397 1594 aa33.19■■■□□ 2.9
PNN-205ENST00000556530 DNAJC5Q9H3Z4 198 aa33.18■■■□□ 2.9
PNN-205ENST00000556530 FHAD1B1AJZ9 1412 aa33.17■■■□□ 2.9
PNN-205ENST00000556530 GRIN2AQ12879 1464 aa33.05■■■□□ 2.88
PNN-205ENST00000556530 CUL7Q14999 1698 aa33.05■■■□□ 2.88
PNN-205ENST00000556530 CARMIL1Q5VZK9 1371 aa33.04■■■□□ 2.88
PNN-205ENST00000556530 FAM9AQ8IZU1 332 aaPredicted RBP33.02■■■□□ 2.88
PNN-205ENST00000556530 CSRNP3Q8WYN3 585 aa32.92■■■□□ 2.86
PNN-205ENST00000556530 EEA1Q15075 1411 aa32.9■■■□□ 2.86
PNN-205ENST00000556530 CEP170Q5SW79 1584 aa32.89■■■□□ 2.86
PNN-205ENST00000556530 NUP160Q12769 1436 aa32.86■■■□□ 2.85
PNN-205ENST00000556530 CLASP1Q7Z460 1538 aa32.86■■■□□ 2.85
PNN-205ENST00000556530 RAPGEF2Q9Y4G8 1499 aa32.85■■■□□ 2.85
PNN-205ENST00000556530 PRXQ9BXM0 1461 aa32.76■■■□□ 2.84
PNN-205ENST00000556530 ARHGEF11O15085 1522 aa32.67■■■□□ 2.82
PNN-205ENST00000556530 RIMBP3CA6NJZ7 1639 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms