Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
AMBRA1Q9C0C7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 WASH3P-207ENST00000560956 1394 ntBASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 FO538757.1-201ENST00000623083 1397 ntBASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
AMBRA1Q9C0C7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 BEND3P1-201ENST00000421591 1944 ntBASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 AL139400.1-201ENST00000366220 510 ntBASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 MIR770-201ENST00000390219 98 ntBASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 KRT18P32-201ENST00000424695 1287 ntBASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 GPS2P2-201ENST00000430745 888 ntBASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
AMBRA1Q9C0C7 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
AMBRA1Q9C0C7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms