RNA–Protein interactions for RNA: ENST00000610723.4

TPGS2-220, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 3 BASIC

Gene TPGS2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-220ENST00000610723 NISCHQ9Y2I1 1504 aa40.32■■■■■ 4.05
TPGS2-220ENST00000610723 CCDC180Q9P1Z9 1646 aa35.9■■■■□ 3.34
TPGS2-220ENST00000610723 ABCC9O60706 1549 aa35.54■■■■□ 3.28
TPGS2-220ENST00000610723 RB1CC1Q8TDY2 1594 aa33.98■■■■□ 3.03
TPGS2-220ENST00000610723 DCAF8L2P0C7V8 631 aa33.97■■■■□ 3.03
TPGS2-220ENST00000610723 NACADO15069 1562 aa33.86■■■■□ 3.01
TPGS2-220ENST00000610723 MYO15BQ96JP2 1530 aa33.51■■■□□ 2.96
TPGS2-220ENST00000610723 ZCCHC6Q5VYS8 1495 aaKnown RBP33.51■■■□□ 2.96
TPGS2-220ENST00000610723 DCAF1Q9Y4B6 1507 aa33.28■■■□□ 2.92
TPGS2-220ENST00000610723 PABPN1Q86U42 306 aaKnown RBP eCLIP33.2■■■□□ 2.91
TPGS2-220ENST00000610723 UNC13AQ9UPW8 1703 aa33.17■■■□□ 2.9
TPGS2-220ENST00000610723 BICRAQ9NZM4 1560 aa32.96■■■□□ 2.87
TPGS2-220ENST00000610723 DNAJC5BQ9UF47 199 aa32.88■■■□□ 2.85
TPGS2-220ENST00000610723 SCRIBQ14160 1630 aa32.84■■■□□ 2.85
TPGS2-220ENST00000610723 SHROOM4Q9ULL8 1493 aa32.52■■■□□ 2.8
TPGS2-220ENST00000610723 EIF4G1Q04637 1599 aaKnown RBP32.12■■■□□ 2.73
TPGS2-220ENST00000610723 CC2D2AQ9P2K1 1620 aa32.08■■■□□ 2.73
TPGS2-220ENST00000610723 CECR2Q9BXF3 1484 aa31.93■■■□□ 2.7
TPGS2-220ENST00000610723 SMARCA4P51532 1647 aa31.33■■■□□ 2.61
TPGS2-220ENST00000610723 NCAPD3P42695 1498 aa31.26■■■□□ 2.59
TPGS2-220ENST00000610723 ATAD2BQ9ULI0 1458 aa31.26■■■□□ 2.59
TPGS2-220ENST00000610723 BAZ1AQ9NRL2 1556 aaPredicted RBP31.26■■■□□ 2.59
TPGS2-220ENST00000610723 SMARCA2P51531 1590 aa31.18■■■□□ 2.58
TPGS2-220ENST00000610723 MROH2BQ7Z745 1585 aa31.09■■■□□ 2.57
TPGS2-220ENST00000610723 HMGXB3Q12766 1538 aa31.06■■■□□ 2.56
TPGS2-220ENST00000610723 BAZ1BQ9UIG0 1483 aaKnown RBP31■■■□□ 2.55
TPGS2-220ENST00000610723 PEG3Q9GZU2 1588 aa30.99■■■□□ 2.55
TPGS2-220ENST00000610723 WIZO95785 1651 aa30.74■■■□□ 2.51
TPGS2-220ENST00000610723 NESP48681 1621 aa30.66■■■□□ 2.5
TPGS2-220ENST00000610723 ERCC6Q03468 1493 aa30.65■■■□□ 2.5
TPGS2-220ENST00000610723 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
TPGS2-220ENST00000610723 LAMC3Q9Y6N6 1575 aa30.47■■■□□ 2.47
TPGS2-220ENST00000610723 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
TPGS2-220ENST00000610723 CADPSQ9ULU8 1353 aa30.37■■■□□ 2.45
TPGS2-220ENST00000610723 CUX2O14529 1486 aa30.36■■■□□ 2.45
TPGS2-220ENST00000610723 PDS5BQ9NTI5 1447 aa30.32■■■□□ 2.44
TPGS2-220ENST00000610723 KIF21AQ7Z4S6 1674 aa30.23■■■□□ 2.43
TPGS2-220ENST00000610723 THOC2Q8NI27 1593 aaKnown RBP30.19■■■□□ 2.42
TPGS2-220ENST00000610723 CFTRP13569 1480 aa30.1■■■□□ 2.41
TPGS2-220ENST00000610723 CCDC88BA6NC98 1476 aa30.06■■■□□ 2.4
TPGS2-220ENST00000610723 FANCD2Q9BXW9 1451 aa30.03■■■□□ 2.4
TPGS2-220ENST00000610723 MRC2Q9UBG0 1479 aa30.02■■■□□ 2.4
TPGS2-220ENST00000610723 CEP164Q9UPV0 1460 aa30.01■■■□□ 2.39
TPGS2-220ENST00000610723 WDR62O43379 1518 aa29.89■■■□□ 2.38
TPGS2-220ENST00000610723 DNAJC5Q9H3Z4 198 aa29.81■■■□□ 2.36
TPGS2-220ENST00000610723 PRDM2Q13029 1718 aa29.79■■■□□ 2.36
TPGS2-220ENST00000610723 SUPT5HO00267 1087 aaKnown RBP29.77■■■□□ 2.36
TPGS2-220ENST00000610723 URB2Q14146 1524 aaKnown RBP29.74■■■□□ 2.35
TPGS2-220ENST00000610723 TOPBP1Q92547 1522 aa29.5■■■□□ 2.31
TPGS2-220ENST00000610723 ABCC8Q09428 1581 aa29.46■■■□□ 2.31
TPGS2-220ENST00000610723 DNMBPQ6XZF7 1577 aa29.43■■■□□ 2.3
TPGS2-220ENST00000610723 IFT140Q96RY7 1462 aa29.38■■■□□ 2.29
TPGS2-220ENST00000610723 ZNF608Q9ULD9 1512 aaPredicted RBP29.3■■■□□ 2.28
TPGS2-220ENST00000610723 POLA1P09884 1462 aaPredicted RBP29.24■■■□□ 2.27
TPGS2-220ENST00000610723 CUX1P39880 1505 aa29.18■■■□□ 2.26
TPGS2-220ENST00000610723 TARBP1Q13395 1621 aaKnown RBP29.17■■■□□ 2.26
TPGS2-220ENST00000610723 RAD54L2Q9Y4B4 1467 aa29.16■■■□□ 2.26
TPGS2-220ENST00000610723 SOGA1O94964 1423 aa29.15■■■□□ 2.26
TPGS2-220ENST00000610723 EIF4G3O43432 1585 aaKnown RBP29.14■■■□□ 2.26
TPGS2-220ENST00000610723 FGD5Q6ZNL6 1462 aa29.13■■■□□ 2.25
TPGS2-220ENST00000610723 OSCARQ8IYS5 282 aa29.12■■■□□ 2.25
TPGS2-220ENST00000610723 AQRO60306 1485 aaKnown RBP eCLIP29.12■■■□□ 2.251e-6■■□□□ 12.5
TPGS2-220ENST00000610723 TDRD9Q8NDG6 1382 aaKnown RBP29.04■■■□□ 2.24
TPGS2-220ENST00000610723 FBLN2P98095 1184 aa28.9■■■□□ 2.22
TPGS2-220ENST00000610723 WRNQ14191 1432 aaPredicted RBP eCLIP28.9■■■□□ 2.22
TPGS2-220ENST00000610723 WDR97A6NE52 1622 aa28.88■■■□□ 2.21
TPGS2-220ENST00000610723 SYNJ1O43426 1573 aa28.83■■■□□ 2.21
TPGS2-220ENST00000610723 SNAPC4Q5SXM2 1469 aa28.83■■■□□ 2.2
TPGS2-220ENST00000610723 TOP2BQ02880 1626 aa28.83■■■□□ 2.2
TPGS2-220ENST00000610723 CHD1O14646 1710 aa28.81■■■□□ 2.2
TPGS2-220ENST00000610723 BIVM-ERCC5R4GMW8 1640 aa28.81■■■□□ 2.2
TPGS2-220ENST00000610723 TRIM41Q8WV44 630 aa28.81■■■□□ 2.2
TPGS2-220ENST00000610723 GRIN2BQ13224 1484 aa28.81■■■□□ 2.2
TPGS2-220ENST00000610723 ABCA10Q8WWZ4 1543 aa28.81■■■□□ 2.2
TPGS2-220ENST00000610723 GAPVD1Q14C86 1478 aa28.78■■■□□ 2.2
TPGS2-220ENST00000610723 MAGI1Q96QZ7 1491 aaPredicted RBP28.73■■■□□ 2.19
TPGS2-220ENST00000610723 CHMP7Q8WUX9 453 aaPredicted RBP28.73■■■□□ 2.19
TPGS2-220ENST00000610723 PBRM1Q86U86 1689 aa28.7■■■□□ 2.18
TPGS2-220ENST00000610723 ABCA5Q8WWZ7 1642 aa28.7■■■□□ 2.18
TPGS2-220ENST00000610723 SYNJ2O15056 1496 aa28.65■■■□□ 2.18
TPGS2-220ENST00000610723 RIMBP3CA6NJZ7 1639 aa28.64■■■□□ 2.18
TPGS2-220ENST00000610723 RIMBP3BA6NNM3 1639 aa28.64■■■□□ 2.18
TPGS2-220ENST00000610723 RIMBP3Q9UFD9 1639 aa28.64■■■□□ 2.18
TPGS2-220ENST00000610723 ARHGEF11O15085 1522 aa28.61■■■□□ 2.17
TPGS2-220ENST00000610723 CLASP1Q7Z460 1538 aa28.49■■■□□ 2.15
TPGS2-220ENST00000610723 ADAMTS12P58397 1594 aa28.47■■■□□ 2.15
TPGS2-220ENST00000610723 ERICH3Q5RHP9 1530 aa28.45■■■□□ 2.14
TPGS2-220ENST00000610723 CYB5RLQ6IPT4 315 aa28.44■■■□□ 2.14
TPGS2-220ENST00000610723 GRIN2AQ12879 1464 aa28.43■■■□□ 2.14
TPGS2-220ENST00000610723 FHAD1B1AJZ9 1412 aa28.43■■■□□ 2.14
TPGS2-220ENST00000610723 ARAP1Q96P48 1450 aa28.37■■■□□ 2.13
TPGS2-220ENST00000610723 KIF27Q86VH2 1401 aa28.32■■■□□ 2.12
TPGS2-220ENST00000610723 NUP160Q12769 1436 aa28.3■■■□□ 2.12
TPGS2-220ENST00000610723 CEP170Q5SW79 1584 aa28.3■■■□□ 2.12
TPGS2-220ENST00000610723 IGF1RP08069 1367 aa28.25■■■□□ 2.11
TPGS2-220ENST00000610723 CUL7Q14999 1698 aa28.13■■■□□ 2.09
TPGS2-220ENST00000610723 ERCC6L2Q5T890 1561 aa28.13■■■□□ 2.09
TPGS2-220ENST00000610723 SHROOM2Q13796 1616 aa28.09■■■□□ 2.09
TPGS2-220ENST00000610723 CARMIL1Q5VZK9 1371 aa28.08■■■□□ 2.09
TPGS2-220ENST00000610723 JPH4Q96JJ6 628 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 398.4 ms