RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 NISCHQ9Y2I1 1504 aa30.34■■■□□ 2.45
LINC00475-202ENST00000416438 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.76
LINC00475-202ENST00000416438 CCDC180Q9P1Z9 1646 aa25.84■■□□□ 1.73
LINC00475-202ENST00000416438 ZCCHC6Q5VYS8 1495 aaKnown RBP25.63■■□□□ 1.69
LINC00475-202ENST00000416438 SUPT5HO00267 1087 aaKnown RBP25.63■■□□□ 1.69
LINC00475-202ENST00000416438 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
LINC00475-202ENST00000416438 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
LINC00475-202ENST00000416438 DCAF1Q9Y4B6 1507 aa24.85■■□□□ 1.57
LINC00475-202ENST00000416438 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
LINC00475-202ENST00000416438 PCGF6Q9BYE7 350 aa24.28■■□□□ 1.48
LINC00475-202ENST00000416438 SCRIBQ14160 1630 aa24.26■■□□□ 1.47
LINC00475-202ENST00000416438 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
LINC00475-202ENST00000416438 HRCP23327 699 aa24.25■■□□□ 1.47
LINC00475-202ENST00000416438 ABCC9O60706 1549 aa24.16■■□□□ 1.46
LINC00475-202ENST00000416438 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
LINC00475-202ENST00000416438 NACADO15069 1562 aa23.93■■□□□ 1.42
LINC00475-202ENST00000416438 PPARGC1BQ86YN6 1023 aaKnown RBP23.88■■□□□ 1.41
LINC00475-202ENST00000416438 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
LINC00475-202ENST00000416438 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
LINC00475-202ENST00000416438 FAM9AQ8IZU1 332 aaPredicted RBP23.72■■□□□ 1.39
LINC00475-202ENST00000416438 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
LINC00475-202ENST00000416438 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
LINC00475-202ENST00000416438 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
LINC00475-202ENST00000416438 EHMT2Q96KQ7 1210 aa23.61■■□□□ 1.37
LINC00475-202ENST00000416438 WIZO95785 1651 aa23.48■■□□□ 1.35
LINC00475-202ENST00000416438 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
LINC00475-202ENST00000416438 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
LINC00475-202ENST00000416438 SMARCA4P51532 1647 aa23.14■■□□□ 1.3
LINC00475-202ENST00000416438 ZEB1P37275 1124 aaPredicted RBP23.13■■□□□ 1.29
LINC00475-202ENST00000416438 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
LINC00475-202ENST00000416438 TOP2AP11388 1531 aaKnown RBP23.07■■□□□ 1.28
LINC00475-202ENST00000416438 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
LINC00475-202ENST00000416438 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
LINC00475-202ENST00000416438 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
LINC00475-202ENST00000416438 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
LINC00475-202ENST00000416438 SMARCA2P51531 1590 aa22.96■■□□□ 1.27
LINC00475-202ENST00000416438 TTBK1Q5TCY1 1321 aaPredicted RBP22.84■■□□□ 1.25
LINC00475-202ENST00000416438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.83■■□□□ 1.25
LINC00475-202ENST00000416438 SOGA1O94964 1423 aa22.82■■□□□ 1.24
LINC00475-202ENST00000416438 CCER1Q8TC90 406 aaPredicted RBP22.73■■□□□ 1.23
LINC00475-202ENST00000416438 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
LINC00475-202ENST00000416438 CEP162Q5TB80 1403 aa22.7■■□□□ 1.22
LINC00475-202ENST00000416438 CSRNP3Q8WYN3 585 aa22.69■■□□□ 1.22
LINC00475-202ENST00000416438 UBTFP17480 764 aaKnown RBP22.67■■□□□ 1.22
LINC00475-202ENST00000416438 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
LINC00475-202ENST00000416438 TNIKQ9UKE5 1360 aa22.63■■□□□ 1.21
LINC00475-202ENST00000416438 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
LINC00475-202ENST00000416438 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
LINC00475-202ENST00000416438 EEA1Q15075 1411 aa22.54■■□□□ 1.2
LINC00475-202ENST00000416438 BAZ1BQ9UIG0 1483 aaKnown RBP22.53■■□□□ 1.2
LINC00475-202ENST00000416438 GOLGA3Q08378 1498 aa22.46■■□□□ 1.19
LINC00475-202ENST00000416438 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
LINC00475-202ENST00000416438 SYNJ1O43426 1573 aa22.43■■□□□ 1.18
LINC00475-202ENST00000416438 RANGAP1P46060 587 aaPredicted RBP22.32■■□□□ 1.16
LINC00475-202ENST00000416438 DIEXFQ68CQ4 756 aaKnown RBP22.31■■□□□ 1.16
LINC00475-202ENST00000416438 CEP164Q9UPV0 1460 aa22.31■■□□□ 1.16
LINC00475-202ENST00000416438 HNRNPUL2Q1KMD3 747 aaKnown RBP22.27■■□□□ 1.16
LINC00475-202ENST00000416438 CLIP1P30622 1438 aa22.26■■□□□ 1.15
LINC00475-202ENST00000416438 RAPGEF2Q9Y4G8 1499 aa22.22■■□□□ 1.15
LINC00475-202ENST00000416438 KIF21BO75037 1637 aa22.21■■□□□ 1.15
LINC00475-202ENST00000416438 NEUROD1Q13562 356 aa22.2■■□□□ 1.14
LINC00475-202ENST00000416438 ACIN1Q9UKV3 1341 aaKnown RBP22.17■■□□□ 1.14
LINC00475-202ENST00000416438 NCAPD3P42695 1498 aa22.16■■□□□ 1.14
LINC00475-202ENST00000416438 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.13
LINC00475-202ENST00000416438 TOP2BQ02880 1626 aa22.14■■□□□ 1.13
LINC00475-202ENST00000416438 HMGXB3Q12766 1538 aa22.13■■□□□ 1.13
LINC00475-202ENST00000416438 APLP2Q06481 763 aa22.13■■□□□ 1.13
LINC00475-202ENST00000416438 ZNF316A6NFI3 1004 aaPredicted RBP22.1■■□□□ 1.13
LINC00475-202ENST00000416438 BIVM-ERCC5R4GMW8 1640 aa22.05■■□□□ 1.12
LINC00475-202ENST00000416438 CUX1P39880 1505 aa21.98■■□□□ 1.11
LINC00475-202ENST00000416438 CENPBP07199 599 aaPredicted RBP21.98■■□□□ 1.11
LINC00475-202ENST00000416438 GTF3C3Q9Y5Q9 886 aa21.97■■□□□ 1.11
LINC00475-202ENST00000416438 CFTRP13569 1480 aa21.95■■□□□ 1.1
LINC00475-202ENST00000416438 PRXQ9BXM0 1461 aa21.92■■□□□ 1.1
LINC00475-202ENST00000416438 KANK4Q5T7N3 995 aaPredicted RBP21.9■■□□□ 1.1
LINC00475-202ENST00000416438 YTHDC1Q96MU7 727 aaKnown RBP21.89■■□□□ 1.09
LINC00475-202ENST00000416438 PELP1Q8IZL8 1130 aaKnown RBP21.87■■□□□ 1.09
LINC00475-202ENST00000416438 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
LINC00475-202ENST00000416438 MIER1Q8N108 512 aa21.86■■□□□ 1.09
LINC00475-202ENST00000416438 ERICH3Q5RHP9 1530 aa21.84■■□□□ 1.09
LINC00475-202ENST00000416438 KIF27Q86VH2 1401 aa21.83■■□□□ 1.08
LINC00475-202ENST00000416438 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
LINC00475-202ENST00000416438 DHX57Q6P158 1386 aaKnown RBP21.73■■□□□ 1.07
LINC00475-202ENST00000416438 PRDM2Q13029 1718 aa21.73■■□□□ 1.07
LINC00475-202ENST00000416438 CC2D2AQ9P2K1 1620 aa21.71■■□□□ 1.07
LINC00475-202ENST00000416438 ITGAEP38570 1179 aa21.68■■□□□ 1.06
LINC00475-202ENST00000416438 CUX2O14529 1486 aa21.68■■□□□ 1.06
LINC00475-202ENST00000416438 ARHGAP35Q9NRY4 1499 aa21.68■■□□□ 1.06
LINC00475-202ENST00000416438 IGF1RP08069 1367 aa21.63■■□□□ 1.05
LINC00475-202ENST00000416438 RRBP1Q9P2E9 1410 aaKnown RBP21.62■■□□□ 1.05
LINC00475-202ENST00000416438 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
LINC00475-202ENST00000416438 CLSPNQ9HAW4 1339 aa21.61■■□□□ 1.05
LINC00475-202ENST00000416438 CCNB3Q8WWL7 1395 aa21.58■■□□□ 1.05
LINC00475-202ENST00000416438 FANCD2Q9BXW9 1451 aa21.54■■□□□ 1.04
LINC00475-202ENST00000416438 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
LINC00475-202ENST00000416438 P3H3Q8IVL6 736 aa21.5■■□□□ 1.03
LINC00475-202ENST00000416438 NESP48681 1621 aa21.48■■□□□ 1.03
LINC00475-202ENST00000416438 ATP1B4Q9UN42 357 aaPredicted RBP21.45■■□□□ 1.02
LINC00475-202ENST00000416438 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
LINC00475-202ENST00000416438 RAB3GAP2Q9H2M9 1393 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms