RNA–Protein interactions for RNA: ENST00000421591.1

BEND3P1-201, Transcript of BEN domain containing 3 pseudogene 1, humanhuman

BASIC

Gene BEND3P1, Length 1,944 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3P1-201ENST00000421591 NISCHQ9Y2I1 1504 aa31.04■■■□□ 2.56
BEND3P1-201ENST00000421591 CCDC180Q9P1Z9 1646 aa27■■□□□ 1.91
BEND3P1-201ENST00000421591 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
BEND3P1-201ENST00000421591 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
BEND3P1-201ENST00000421591 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
BEND3P1-201ENST00000421591 DCAF8L2P0C7V8 631 aa25.46■■□□□ 1.67
BEND3P1-201ENST00000421591 ABCC9O60706 1549 aa25.28■■□□□ 1.64
BEND3P1-201ENST00000421591 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
BEND3P1-201ENST00000421591 NACADO15069 1562 aa25.04■■□□□ 1.6
BEND3P1-201ENST00000421591 SCRIBQ14160 1630 aa24.87■■□□□ 1.57
BEND3P1-201ENST00000421591 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
BEND3P1-201ENST00000421591 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
BEND3P1-201ENST00000421591 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
BEND3P1-201ENST00000421591 HRCP23327 699 aa24.34■■□□□ 1.49
BEND3P1-201ENST00000421591 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
BEND3P1-201ENST00000421591 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
BEND3P1-201ENST00000421591 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
BEND3P1-201ENST00000421591 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.45
BEND3P1-201ENST00000421591 MROH2BQ7Z745 1585 aa24.01■■□□□ 1.43
BEND3P1-201ENST00000421591 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
BEND3P1-201ENST00000421591 WIZO95785 1651 aa23.85■■□□□ 1.41
BEND3P1-201ENST00000421591 PABPN1Q86U42 306 aaKnown RBP eCLIP23.85■■□□□ 1.41
BEND3P1-201ENST00000421591 SMARCA4P51532 1647 aa23.85■■□□□ 1.41
BEND3P1-201ENST00000421591 PCGF6Q9BYE7 350 aa23.8■■□□□ 1.4
BEND3P1-201ENST00000421591 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.37
BEND3P1-201ENST00000421591 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
BEND3P1-201ENST00000421591 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
BEND3P1-201ENST00000421591 ZEB1P37275 1124 aaPredicted RBP23.46■■□□□ 1.35
BEND3P1-201ENST00000421591 SMARCA2P51531 1590 aa23.39■■□□□ 1.33
BEND3P1-201ENST00000421591 ATAD2BQ9ULI0 1458 aa23.35■■□□□ 1.33
BEND3P1-201ENST00000421591 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
BEND3P1-201ENST00000421591 PPARGC1BQ86YN6 1023 aaKnown RBP23.34■■□□□ 1.33
BEND3P1-201ENST00000421591 CCDC88BA6NC98 1476 aa23.32■■□□□ 1.32
BEND3P1-201ENST00000421591 LOC105371045A0A1W2PR82 267 aa23.29■■□□□ 1.32
BEND3P1-201ENST00000421591 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
BEND3P1-201ENST00000421591 PELP1Q8IZL8 1130 aaKnown RBP23.2■■□□□ 1.3
BEND3P1-201ENST00000421591 HMGXB3Q12766 1538 aa23.13■■□□□ 1.29
BEND3P1-201ENST00000421591 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
BEND3P1-201ENST00000421591 TRIM41Q8WV44 630 aa23.07■■□□□ 1.28
BEND3P1-201ENST00000421591 ABCC8Q09428 1581 aa22.95■■□□□ 1.27
BEND3P1-201ENST00000421591 CC2D2AQ9P2K1 1620 aa22.91■■□□□ 1.26
BEND3P1-201ENST00000421591 WRNQ14191 1432 aaPredicted RBP eCLIP22.73■■□□□ 1.23
BEND3P1-201ENST00000421591 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
BEND3P1-201ENST00000421591 FAM9AQ8IZU1 332 aaPredicted RBP22.68■■□□□ 1.22
BEND3P1-201ENST00000421591 CFTRP13569 1480 aa22.67■■□□□ 1.22
BEND3P1-201ENST00000421591 PRDM2Q13029 1718 aa22.65■■□□□ 1.22
BEND3P1-201ENST00000421591 TOP2BQ02880 1626 aa22.55■■□□□ 1.2
BEND3P1-201ENST00000421591 BIVM-ERCC5R4GMW8 1640 aa22.55■■□□□ 1.2
BEND3P1-201ENST00000421591 SOGA1O94964 1423 aa22.53■■□□□ 1.2
BEND3P1-201ENST00000421591 SCAF1Q9H7N4 1312 aaKnown RBP22.52■■□□□ 1.2
BEND3P1-201ENST00000421591 CADPSQ9ULU8 1353 aa22.51■■□□□ 1.19
BEND3P1-201ENST00000421591 EEA1Q15075 1411 aa22.5■■□□□ 1.19
BEND3P1-201ENST00000421591 RUSC2Q8N2Y8 1516 aa22.45■■□□□ 1.18
BEND3P1-201ENST00000421591 CUX1P39880 1505 aa22.44■■□□□ 1.18
BEND3P1-201ENST00000421591 EHMT2Q96KQ7 1210 aa22.36■■□□□ 1.17
BEND3P1-201ENST00000421591 CCER1Q8TC90 406 aaPredicted RBP22.35■■□□□ 1.17
BEND3P1-201ENST00000421591 ACIN1Q9UKV3 1341 aaKnown RBP22.35■■□□□ 1.17
BEND3P1-201ENST00000421591 MYT1Q01538 1121 aa22.33■■□□□ 1.17
BEND3P1-201ENST00000421591 CENPBP07199 599 aaPredicted RBP22.33■■□□□ 1.16
BEND3P1-201ENST00000421591 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
BEND3P1-201ENST00000421591 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
BEND3P1-201ENST00000421591 NESP48681 1621 aa22.29■■□□□ 1.16
BEND3P1-201ENST00000421591 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
BEND3P1-201ENST00000421591 KIF21BO75037 1637 aa22.26■■□□□ 1.15
BEND3P1-201ENST00000421591 TNIKQ9UKE5 1360 aa22.25■■□□□ 1.15
BEND3P1-201ENST00000421591 GOLGA3Q08378 1498 aa22.23■■□□□ 1.15
BEND3P1-201ENST00000421591 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
BEND3P1-201ENST00000421591 CEP164Q9UPV0 1460 aa22.21■■□□□ 1.15
BEND3P1-201ENST00000421591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.19■■□□□ 1.14
BEND3P1-201ENST00000421591 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
BEND3P1-201ENST00000421591 DIEXFQ68CQ4 756 aaKnown RBP22.19■■□□□ 1.14
BEND3P1-201ENST00000421591 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
BEND3P1-201ENST00000421591 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
BEND3P1-201ENST00000421591 KIF27Q86VH2 1401 aa22.11■■□□□ 1.13
BEND3P1-201ENST00000421591 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
BEND3P1-201ENST00000421591 NEUROD1Q13562 356 aa22.09■■□□□ 1.13
BEND3P1-201ENST00000421591 RAPGEF2Q9Y4G8 1499 aa22.07■■□□□ 1.12
BEND3P1-201ENST00000421591 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
BEND3P1-201ENST00000421591 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
BEND3P1-201ENST00000421591 PRXQ9BXM0 1461 aa22.05■■□□□ 1.12
BEND3P1-201ENST00000421591 ERICH3Q5RHP9 1530 aa22.05■■□□□ 1.12
BEND3P1-201ENST00000421591 UBTFP17480 764 aaKnown RBP22.05■■□□□ 1.12
BEND3P1-201ENST00000421591 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
BEND3P1-201ENST00000421591 CUX2O14529 1486 aa22.03■■□□□ 1.12
BEND3P1-201ENST00000421591 POLA1P09884 1462 aaPredicted RBP22■■□□□ 1.11
BEND3P1-201ENST00000421591 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
BEND3P1-201ENST00000421591 GTF3C3Q9Y5Q9 886 aa21.96■■□□□ 1.11
BEND3P1-201ENST00000421591 ABCA10Q8WWZ4 1543 aa21.95■■□□□ 1.1
BEND3P1-201ENST00000421591 WDR97A6NE52 1622 aa21.93■■□□□ 1.1
BEND3P1-201ENST00000421591 RAD54L2Q9Y4B4 1467 aa21.93■■□□□ 1.1
BEND3P1-201ENST00000421591 IGF1RP08069 1367 aa21.88■■□□□ 1.09
BEND3P1-201ENST00000421591 CLIP1P30622 1438 aa21.87■■□□□ 1.09
BEND3P1-201ENST00000421591 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
BEND3P1-201ENST00000421591 ABCA5Q8WWZ7 1642 aa21.8■■□□□ 1.08
BEND3P1-201ENST00000421591 CARMIL1Q5VZK9 1371 aa21.77■■□□□ 1.08
BEND3P1-201ENST00000421591 TARBP1Q13395 1621 aaKnown RBP21.77■■□□□ 1.08
BEND3P1-201ENST00000421591 CUL7Q14999 1698 aa21.76■■□□□ 1.07
BEND3P1-201ENST00000421591 CLSPNQ9HAW4 1339 aa21.76■■□□□ 1.07
BEND3P1-201ENST00000421591 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
BEND3P1-201ENST00000421591 WDR62O43379 1518 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms