RNA–Protein interactions for RNA: ENST00000638797.1

CCDC187-205, Transcript of coiled-coil domain containing 187, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC187, Length 10,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-205ENST00000638797 PELP1Q8IZL8 1130 aaKnown RBP26.04■■□□□ 1.76
CCDC187-205ENST00000638797 MYT1Q01538 1121 aa25.18■■□□□ 1.62
CCDC187-205ENST00000638797 DCAF8L2P0C7V8 631 aa25.12■■□□□ 1.61
CCDC187-205ENST00000638797 ERICH6Q7L0X2 663 aa24.82■■□□□ 1.56
CCDC187-205ENST00000638797 CCER1Q8TC90 406 aaPredicted RBP24.67■■□□□ 1.54
CCDC187-205ENST00000638797 CENPBP07199 599 aaPredicted RBP24.47■■□□□ 1.51
CCDC187-205ENST00000638797 SUPT5HO00267 1087 aaKnown RBP24.39■■□□□ 1.5
CCDC187-205ENST00000638797 EHMT2Q96KQ7 1210 aa24.12■■□□□ 1.45
CCDC187-205ENST00000638797 APLP2Q06481 763 aa24.01■■□□□ 1.43
CCDC187-205ENST00000638797 NEFLP07196 543 aa23.94■■□□□ 1.42
CCDC187-205ENST00000638797 ZEB1P37275 1124 aaPredicted RBP23.9■■□□□ 1.42
CCDC187-205ENST00000638797 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
CCDC187-205ENST00000638797 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
CCDC187-205ENST00000638797 YTHDC1Q96MU7 727 aaKnown RBP23.78■■□□□ 1.4
CCDC187-205ENST00000638797 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
CCDC187-205ENST00000638797 DAXXQ9UER7 740 aaPredicted RBP23.54■■□□□ 1.36
CCDC187-205ENST00000638797 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
CCDC187-205ENST00000638797 NISCHQ9Y2I1 1504 aa23.25■■□□□ 1.31
CCDC187-205ENST00000638797 RTL5Q5HYW3 569 aaPredicted RBP23.19■■□□□ 1.3
CCDC187-205ENST00000638797 ZNF316A6NFI3 1004 aaPredicted RBP22.99■■□□□ 1.27
CCDC187-205ENST00000638797 RANGAP1P46060 587 aaPredicted RBP22.84■■□□□ 1.25
CCDC187-205ENST00000638797 HRCP23327 699 aa22.71■■□□□ 1.23
CCDC187-205ENST00000638797 ATP1B4Q9UN42 357 aaPredicted RBP22.59■■□□□ 1.21
CCDC187-205ENST00000638797 TRIM41Q8WV44 630 aa22.58■■□□□ 1.21
CCDC187-205ENST00000638797 TRIM26Q12899 539 aaPredicted RBP22.57■■□□□ 1.2
CCDC187-205ENST00000638797 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
CCDC187-205ENST00000638797 CLSPNQ9HAW4 1339 aa22.51■■□□□ 1.19
CCDC187-205ENST00000638797 GLIPR1L2Q4G1C9 344 aa22.43■■□□□ 1.18
CCDC187-205ENST00000638797 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
CCDC187-205ENST00000638797 POLR3GLQ9BT43 218 aa22.33■■□□□ 1.16
CCDC187-205ENST00000638797 DIEXFQ68CQ4 756 aaKnown RBP22.28■■□□□ 1.16
CCDC187-205ENST00000638797 EIF5BO60841 1220 aaKnown RBP22.25■■□□□ 1.15
CCDC187-205ENST00000638797 CDK11AQ9UQ88 783 aaPredicted RBP22.19■■□□□ 1.14
CCDC187-205ENST00000638797 GTF3C3Q9Y5Q9 886 aa22.17■■□□□ 1.14
CCDC187-205ENST00000638797 CNGB1Q14028 1251 aaPredicted RBP22.1■■□□□ 1.13
CCDC187-205ENST00000638797 BCANQ96GW7 911 aa22.1■■□□□ 1.13
CCDC187-205ENST00000638797 ANP32AP39687 249 aaKnown RBP22.06■■□□□ 1.12
CCDC187-205ENST00000638797 ANP32BQ92688 251 aaKnown RBP21.99■■□□□ 1.11
CCDC187-205ENST00000638797 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
CCDC187-205ENST00000638797 ITGAEP38570 1179 aa21.97■■□□□ 1.11
CCDC187-205ENST00000638797 ZBTB47Q9UFB7 747 aaPredicted RBP21.9■■□□□ 1.1
CCDC187-205ENST00000638797 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
CCDC187-205ENST00000638797 HNRNPUL2Q1KMD3 747 aaKnown RBP21.84■■□□□ 1.09
CCDC187-205ENST00000638797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.78■■□□□ 1.08
CCDC187-205ENST00000638797 CANXP27824 592 aaKnown RBP21.74■■□□□ 1.07
CCDC187-205ENST00000638797 ANP32CO43423 234 aa21.73■■□□□ 1.07
CCDC187-205ENST00000638797 ACIN1Q9UKV3 1341 aaKnown RBP21.71■■□□□ 1.07
CCDC187-205ENST00000638797 NPM2Q86SE8 214 aaKnown RBP21.65■■□□□ 1.06
CCDC187-205ENST00000638797 HSP90AA1P07900 732 aaKnown RBP21.61■■□□□ 1.05
CCDC187-205ENST00000638797 CHIC1Q5VXU3 224 aa21.59■■□□□ 1.05
CCDC187-205ENST00000638797 NBR1Q14596 966 aa21.51■■□□□ 1.03
CCDC187-205ENST00000638797 TNNT2P45379 298 aaPredicted RBP21.5■■□□□ 1.03
CCDC187-205ENST00000638797 LOC105371045A0A1W2PR82 267 aa21.5■■□□□ 1.03
CCDC187-205ENST00000638797 BCL11AQ9H165 835 aa21.49■■□□□ 1.03
CCDC187-205ENST00000638797 UPF2Q9HAU5 1272 aaKnown RBP21.48■■□□□ 1.03
CCDC187-205ENST00000638797 NEUROD1Q13562 356 aa21.36■■□□□ 1.01
CCDC187-205ENST00000638797 FAM50AQ14320 339 aaKnown RBP21.33■■□□□ 1.01
CCDC187-205ENST00000638797 ARXQ96QS3 562 aa21.33■■□□□ 1.01
CCDC187-205ENST00000638797 ZNF326Q5BKZ1 582 aaKnown RBP21.27■■□□□ 1
CCDC187-205ENST00000638797 FKBP8Q14318 412 aa21.27■□□□□ 0.99
CCDC187-205ENST00000638797 NEFMP07197 916 aa21.26■□□□□ 0.99
CCDC187-205ENST00000638797 TRIM52Q96A61 297 aa21.24■□□□□ 0.99
CCDC187-205ENST00000638797 SLC24A1O60721 1099 aa21.2■□□□□ 0.98
CCDC187-205ENST00000638797 CDK11BP21127 795 aaKnown RBP21.18■□□□□ 0.98
CCDC187-205ENST00000638797 TRIM44Q96DX7 344 aaPredicted RBP21.15■□□□□ 0.98
CCDC187-205ENST00000638797 ANP32EQ9BTT0 268 aa21.08■□□□□ 0.97
CCDC187-205ENST00000638797 CCDC136Q96JN2 1154 aa21.06■□□□□ 0.96
CCDC187-205ENST00000638797 ERICH6BQ5W0A0 696 aa21.03■□□□□ 0.96
CCDC187-205ENST00000638797 NAP1L5Q96NT1 182 aaPredicted RBP21.02■□□□□ 0.96
CCDC187-205ENST00000638797 DDRGK1Q96HY6 314 aa21.01■□□□□ 0.95
CCDC187-205ENST00000638797 BECN1Q14457 450 aa21■□□□□ 0.95
CCDC187-205ENST00000638797 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.99■□□□□ 0.95
CCDC187-205ENST00000638797 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
CCDC187-205ENST00000638797 HNRNPUQ00839 825 aaKnown RBP eCLIP20.96■□□□□ 0.95
CCDC187-205ENST00000638797 GOLGA6L22H0YM25 854 aa20.92■□□□□ 0.94
CCDC187-205ENST00000638797 PTMAP06454 111 aaKnown RBP20.92■□□□□ 0.94
CCDC187-205ENST00000638797 NCLP19338 710 aaKnown RBP20.88■□□□□ 0.93
CCDC187-205ENST00000638797 DNTTIP2Q5QJE6 756 aaKnown RBP20.87■□□□□ 0.93
CCDC187-205ENST00000638797 RTN4Q9NQC3 1192 aaKnown RBP20.82■□□□□ 0.92
CCDC187-205ENST00000638797 MYH16Q9H6N6 1097 aa20.81■□□□□ 0.92
CCDC187-205ENST00000638797 TONSLQ96HA7 1378 aa20.79■□□□□ 0.92
CCDC187-205ENST00000638797 FAM9BQ8IZU0 186 aa20.76■□□□□ 0.91
CCDC187-205ENST00000638797 CCDC180Q9P1Z9 1646 aa20.75■□□□□ 0.91
CCDC187-205ENST00000638797 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
CCDC187-205ENST00000638797 ZRSR1Q15695 479 aaKnown RBP20.73■□□□□ 0.91
CCDC187-205ENST00000638797 CHAF1AQ13111 956 aaPredicted RBP20.7■□□□□ 0.9
CCDC187-205ENST00000638797 PPM1GO15355 546 aaPredicted RBP20.68■□□□□ 0.9
CCDC187-205ENST00000638797 AMER1Q5JTC6 1135 aaPredicted RBP20.68■□□□□ 0.9
CCDC187-205ENST00000638797 GOLGA6L6A8MZA4 724 aa20.67■□□□□ 0.9
CCDC187-205ENST00000638797 NOP58Q9Y2X3 529 aaKnown RBP20.62■□□□□ 0.89
CCDC187-205ENST00000638797 IRX6P78412 446 aaPredicted RBP20.62■□□□□ 0.89
CCDC187-205ENST00000638797 TMC1Q8TDI8 760 aa20.59■□□□□ 0.89
CCDC187-205ENST00000638797 DDX10Q13206 875 aaKnown RBP20.57■□□□□ 0.88
CCDC187-205ENST00000638797 LAS1LQ9Y4W2 734 aaKnown RBP20.57■□□□□ 0.88
CCDC187-205ENST00000638797 CASC1Q6TDU7 716 aa20.55■□□□□ 0.88
CCDC187-205ENST00000638797 WDR43Q15061 677 aaKnown RBP eCLIP20.55■□□□□ 0.88
CCDC187-205ENST00000638797 MRS2Q9HD23 443 aa20.55■□□□□ 0.88
CCDC187-205ENST00000638797 NRDCO43847 1150 aa20.54■□□□□ 0.88
CCDC187-205ENST00000638797 SALL2Q9Y467 1007 aaPredicted RBP20.53■□□□□ 0.88
CCDC187-205ENST00000638797 MSNP26038 577 aaKnown RBP20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms