RNA–Protein interactions for RNA: ENST00000258648.6

MED4-201, Transcript of mediator complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MED4, Length 2,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED4-201ENST00000258648 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
MED4-201ENST00000258648 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.57
MED4-201ENST00000258648 ZCCHC6Q5VYS8 1495 aaKnown RBP24.75■■□□□ 1.55
MED4-201ENST00000258648 CCDC180Q9P1Z9 1646 aa24.71■■□□□ 1.55
MED4-201ENST00000258648 SUPT5HO00267 1087 aaKnown RBP24.54■■□□□ 1.52
MED4-201ENST00000258648 HRCP23327 699 aa24.46■■□□□ 1.51
MED4-201ENST00000258648 MYO15BQ96JP2 1530 aa24.45■■□□□ 1.5
MED4-201ENST00000258648 CHIC1Q5VXU3 224 aa24.27■■□□□ 1.48
MED4-201ENST00000258648 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
MED4-201ENST00000258648 PCGF6Q9BYE7 350 aa23.91■■□□□ 1.42
MED4-201ENST00000258648 PPARGC1BQ86YN6 1023 aaKnown RBP23.7■■□□□ 1.38
MED4-201ENST00000258648 ABCC9O60706 1549 aa23.54■■□□□ 1.36
MED4-201ENST00000258648 TRIM26Q12899 539 aaPredicted RBP23.49■■□□□ 1.35
MED4-201ENST00000258648 DCAF8L2P0C7V8 631 aa23.45■■□□□ 1.35
MED4-201ENST00000258648 LOC105371045A0A1W2PR82 267 aa23.43■■□□□ 1.34
MED4-201ENST00000258648 ZEB1P37275 1124 aaPredicted RBP23.28■■□□□ 1.32
MED4-201ENST00000258648 PELP1Q8IZL8 1130 aaKnown RBP23.15■■□□□ 1.3
MED4-201ENST00000258648 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
MED4-201ENST00000258648 RB1CC1Q8TDY2 1594 aa23.09■■□□□ 1.29
MED4-201ENST00000258648 SCRIBQ14160 1630 aa23.01■■□□□ 1.27
MED4-201ENST00000258648 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
MED4-201ENST00000258648 SCAF1Q9H7N4 1312 aaKnown RBP22.82■■□□□ 1.24
MED4-201ENST00000258648 EIF4G1Q04637 1599 aaKnown RBP22.66■■□□□ 1.22
MED4-201ENST00000258648 FAM9AQ8IZU1 332 aaPredicted RBP22.62■■□□□ 1.21
MED4-201ENST00000258648 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.21
MED4-201ENST00000258648 NACADO15069 1562 aa22.57■■□□□ 1.2
MED4-201ENST00000258648 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
MED4-201ENST00000258648 WIZO95785 1651 aa22.54■■□□□ 1.2
MED4-201ENST00000258648 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
MED4-201ENST00000258648 ACIN1Q9UKV3 1341 aaKnown RBP22.46■■□□□ 1.19
MED4-201ENST00000258648 WRNQ14191 1432 aaPredicted RBP eCLIP22.41■■□□□ 1.18
MED4-201ENST00000258648 CCER1Q8TC90 406 aaPredicted RBP22.31■■□□□ 1.16
MED4-201ENST00000258648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.31■■□□□ 1.16
MED4-201ENST00000258648 NEUROD1Q13562 356 aa22.31■■□□□ 1.16
MED4-201ENST00000258648 EHMT2Q96KQ7 1210 aa22.3■■□□□ 1.16
MED4-201ENST00000258648 TOP2AP11388 1531 aaKnown RBP22.26■■□□□ 1.15
MED4-201ENST00000258648 CENPBP07199 599 aaPredicted RBP22.24■■□□□ 1.15
MED4-201ENST00000258648 DIEXFQ68CQ4 756 aaKnown RBP22.21■■□□□ 1.15
MED4-201ENST00000258648 MYT1Q01538 1121 aa22.19■■□□□ 1.14
MED4-201ENST00000258648 CEP162Q5TB80 1403 aa22.17■■□□□ 1.14
MED4-201ENST00000258648 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
MED4-201ENST00000258648 SMARCA2P51531 1590 aa22.14■■□□□ 1.13
MED4-201ENST00000258648 TNIKQ9UKE5 1360 aa22.13■■□□□ 1.13
MED4-201ENST00000258648 GTF3C3Q9Y5Q9 886 aa22.13■■□□□ 1.13
MED4-201ENST00000258648 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
MED4-201ENST00000258648 EEA1Q15075 1411 aa22.12■■□□□ 1.13
MED4-201ENST00000258648 SMARCA4P51532 1647 aa22.11■■□□□ 1.13
MED4-201ENST00000258648 ZNF316A6NFI3 1004 aaPredicted RBP21.97■■□□□ 1.11
MED4-201ENST00000258648 SOGA1O94964 1423 aa21.96■■□□□ 1.11
MED4-201ENST00000258648 GOLGA3Q08378 1498 aa21.96■■□□□ 1.11
MED4-201ENST00000258648 UNC13AQ9UPW8 1703 aa21.91■■□□□ 1.1
MED4-201ENST00000258648 KIF21BO75037 1637 aa21.89■■□□□ 1.09
MED4-201ENST00000258648 RUSC2Q8N2Y8 1516 aa21.85■■□□□ 1.09
MED4-201ENST00000258648 CSRNP3Q8WYN3 585 aa21.83■■□□□ 1.09
MED4-201ENST00000258648 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.08
MED4-201ENST00000258648 TTBK1Q5TCY1 1321 aaPredicted RBP21.77■■□□□ 1.08
MED4-201ENST00000258648 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
MED4-201ENST00000258648 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.07
MED4-201ENST00000258648 UBTFP17480 764 aaKnown RBP21.68■■□□□ 1.06
MED4-201ENST00000258648 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
MED4-201ENST00000258648 VPS8Q8N3P4 1428 aa21.67■■□□□ 1.06
MED4-201ENST00000258648 MIER1Q8N108 512 aa21.65■■□□□ 1.06
MED4-201ENST00000258648 CLIP1P30622 1438 aa21.63■■□□□ 1.05
MED4-201ENST00000258648 YTHDC1Q96MU7 727 aaKnown RBP21.6■■□□□ 1.05
MED4-201ENST00000258648 CLSPNQ9HAW4 1339 aa21.55■■□□□ 1.04
MED4-201ENST00000258648 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
MED4-201ENST00000258648 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
MED4-201ENST00000258648 RAPGEF2Q9Y4G8 1499 aa21.45■■□□□ 1.03
MED4-201ENST00000258648 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
MED4-201ENST00000258648 TOP2BQ02880 1626 aa21.42■■□□□ 1.02
MED4-201ENST00000258648 ERICH3Q5RHP9 1530 aa21.41■■□□□ 1.02
MED4-201ENST00000258648 DHX57Q6P158 1386 aaKnown RBP21.39■■□□□ 1.02
MED4-201ENST00000258648 APLP2Q06481 763 aa21.36■■□□□ 1.01
MED4-201ENST00000258648 CUX2O14529 1486 aa21.33■■□□□ 1.01
MED4-201ENST00000258648 ARAP1Q96P48 1450 aa21.32■■□□□ 1
MED4-201ENST00000258648 ATAD2BQ9ULI0 1458 aa21.29■■□□□ 1
MED4-201ENST00000258648 RRBP1Q9P2E9 1410 aaKnown RBP21.28■■□□□ 1
MED4-201ENST00000258648 PRXQ9BXM0 1461 aa21.26■□□□□ 0.99
MED4-201ENST00000258648 SUPT16HQ9Y5B9 1047 aaKnown RBP21.26■□□□□ 0.99
MED4-201ENST00000258648 TSHZ2Q9NRE2 1034 aa21.06■□□□□ 0.96
MED4-201ENST00000258648 MAPKBP1O60336 1514 aa21.05■□□□□ 0.96
MED4-201ENST00000258648 KANK4Q5T7N3 995 aaPredicted RBP21.05■□□□□ 0.96
MED4-201ENST00000258648 CCNB3Q8WWL7 1395 aa21.05■□□□□ 0.96
MED4-201ENST00000258648 PABPN1Q86U42 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
MED4-201ENST00000258648 MAP3K1Q13233 1512 aa21.02■□□□□ 0.96
MED4-201ENST00000258648 CUX1P39880 1505 aa21.01■□□□□ 0.95
MED4-201ENST00000258648 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
MED4-201ENST00000258648 TIAM1Q13009 1591 aa20.97■□□□□ 0.95
MED4-201ENST00000258648 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
MED4-201ENST00000258648 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
MED4-201ENST00000258648 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
MED4-201ENST00000258648 PRDM2Q13029 1718 aa20.97■□□□□ 0.95
MED4-201ENST00000258648 ANP32EQ9BTT0 268 aa20.95■□□□□ 0.94
MED4-201ENST00000258648 CFAP43Q8NDM7 1665 aa20.92■□□□□ 0.94
MED4-201ENST00000258648 RAB3GAP2Q9H2M9 1393 aa20.91■□□□□ 0.94
MED4-201ENST00000258648 WDR97A6NE52 1622 aa20.87■□□□□ 0.93
MED4-201ENST00000258648 SETD5Q9C0A6 1442 aa20.84■□□□□ 0.93
MED4-201ENST00000258648 LRRC9Q6ZRR7 1453 aa20.8■□□□□ 0.92
MED4-201ENST00000258648 NCAPD3P42695 1498 aa20.8■□□□□ 0.92
MED4-201ENST00000258648 CFTRP13569 1480 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms