RNA–Protein interactions for RNA: ENST00000338946.10

PHF8-203, Transcript of PHD finger protein 8, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PHF8, Length 4,651 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8-203ENST00000338946 DCAF8L2P0C7V8 631 aa28.58■■■□□ 2.17
PHF8-203ENST00000338946 NISCHQ9Y2I1 1504 aa28.26■■■□□ 2.11
PHF8-203ENST00000338946 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
PHF8-203ENST00000338946 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
PHF8-203ENST00000338946 EHMT2Q96KQ7 1210 aa25.49■■□□□ 1.67
PHF8-203ENST00000338946 FAM9AQ8IZU1 332 aaPredicted RBP25.04■■□□□ 1.6
PHF8-203ENST00000338946 APLP2Q06481 763 aa24.98■■□□□ 1.59
PHF8-203ENST00000338946 TRIM41Q8WV44 630 aa24.74■■□□□ 1.55
PHF8-203ENST00000338946 ABCC9O60706 1549 aa24.69■■□□□ 1.54
PHF8-203ENST00000338946 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.53
PHF8-203ENST00000338946 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
PHF8-203ENST00000338946 ATP1B4Q9UN42 357 aaPredicted RBP24.42■■□□□ 1.5
PHF8-203ENST00000338946 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
PHF8-203ENST00000338946 PABPN1Q86U42 306 aaKnown RBP eCLIP24.34■■□□□ 1.49
PHF8-203ENST00000338946 PCGF6Q9BYE7 350 aa24.02■■□□□ 1.44
PHF8-203ENST00000338946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
PHF8-203ENST00000338946 HNRNPUL2Q1KMD3 747 aaKnown RBP23.78■■□□□ 1.4
PHF8-203ENST00000338946 CCER1Q8TC90 406 aaPredicted RBP23.71■■□□□ 1.39
PHF8-203ENST00000338946 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
PHF8-203ENST00000338946 PPARGC1BQ86YN6 1023 aaKnown RBP23.67■■□□□ 1.38
PHF8-203ENST00000338946 MYT1LQ9UL68 1186 aa23.6■■□□□ 1.37
PHF8-203ENST00000338946 LOC105371045A0A1W2PR82 267 aa23.51■■□□□ 1.35
PHF8-203ENST00000338946 ZEB1P37275 1124 aaPredicted RBP23.45■■□□□ 1.35
PHF8-203ENST00000338946 ITGAEP38570 1179 aa23.44■■□□□ 1.34
PHF8-203ENST00000338946 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
PHF8-203ENST00000338946 CCDC180Q9P1Z9 1646 aa23.36■■□□□ 1.33
PHF8-203ENST00000338946 PELP1Q8IZL8 1130 aaKnown RBP23.34■■□□□ 1.33
PHF8-203ENST00000338946 ZCCHC6Q5VYS8 1495 aaKnown RBP23.34■■□□□ 1.33
PHF8-203ENST00000338946 FBLN2P98095 1184 aa23.34■■□□□ 1.33
PHF8-203ENST00000338946 TRIM26Q12899 539 aaPredicted RBP23.23■■□□□ 1.31
PHF8-203ENST00000338946 RB1CC1Q8TDY2 1594 aa23.05■■□□□ 1.28
PHF8-203ENST00000338946 FAM50AQ14320 339 aaKnown RBP22.97■■□□□ 1.27
PHF8-203ENST00000338946 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
PHF8-203ENST00000338946 CSRNP3Q8WYN3 585 aa22.92■■□□□ 1.26
PHF8-203ENST00000338946 POLR3GLQ9BT43 218 aa22.9■■□□□ 1.26
PHF8-203ENST00000338946 P3H3Q8IVL6 736 aa22.86■■□□□ 1.25
PHF8-203ENST00000338946 NACADO15069 1562 aa22.82■■□□□ 1.24
PHF8-203ENST00000338946 ARID3CA6NKF2 412 aa22.79■■□□□ 1.24
PHF8-203ENST00000338946 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
PHF8-203ENST00000338946 YTHDC1Q96MU7 727 aaKnown RBP22.69■■□□□ 1.22
PHF8-203ENST00000338946 CNGB1Q14028 1251 aaPredicted RBP22.62■■□□□ 1.21
PHF8-203ENST00000338946 CDK11AQ9UQ88 783 aaPredicted RBP22.62■■□□□ 1.21
PHF8-203ENST00000338946 NEFLP07196 543 aa22.62■■□□□ 1.21
PHF8-203ENST00000338946 SLC4A1APQ9BWU0 796 aaKnown RBP22.6■■□□□ 1.21
PHF8-203ENST00000338946 NPM1P06748 294 aaKnown RBP eCLIP22.55■■□□□ 1.2
PHF8-203ENST00000338946 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
PHF8-203ENST00000338946 HRCP23327 699 aa22.53■■□□□ 1.2
PHF8-203ENST00000338946 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
PHF8-203ENST00000338946 NEUROD1Q13562 356 aa22.49■■□□□ 1.19
PHF8-203ENST00000338946 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
PHF8-203ENST00000338946 BAZ1BQ9UIG0 1483 aaKnown RBP22.46■■□□□ 1.19
PHF8-203ENST00000338946 ZNF326Q5BKZ1 582 aaKnown RBP22.42■■□□□ 1.18
PHF8-203ENST00000338946 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
PHF8-203ENST00000338946 ESF1Q9H501 851 aaKnown RBP22.32■■□□□ 1.16
PHF8-203ENST00000338946 BCANQ96GW7 911 aa22.29■■□□□ 1.16
PHF8-203ENST00000338946 ERICH6Q7L0X2 663 aa22.25■■□□□ 1.15
PHF8-203ENST00000338946 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
PHF8-203ENST00000338946 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
PHF8-203ENST00000338946 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
PHF8-203ENST00000338946 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
PHF8-203ENST00000338946 PLPPR3Q6T4P5 718 aa22.11■■□□□ 1.13
PHF8-203ENST00000338946 MTUS2Q5JR59 1369 aa22.09■■□□□ 1.13
PHF8-203ENST00000338946 STAG3Q9UJ98 1225 aa22.08■■□□□ 1.12
PHF8-203ENST00000338946 CHGAP10645 457 aaKnown RBP22.07■■□□□ 1.12
PHF8-203ENST00000338946 TSPY4P0CV99 314 aa22.07■■□□□ 1.12
PHF8-203ENST00000338946 TSPY10P0CW01 314 aa22.07■■□□□ 1.12
PHF8-203ENST00000338946 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
PHF8-203ENST00000338946 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
PHF8-203ENST00000338946 CHIC2Q9UKJ5 165 aa22.04■■□□□ 1.12
PHF8-203ENST00000338946 EEA1Q15075 1411 aa22.03■■□□□ 1.12
PHF8-203ENST00000338946 CLIP1P30622 1438 aa22.03■■□□□ 1.12
PHF8-203ENST00000338946 KCNH8Q96L42 1107 aa22.02■■□□□ 1.12
PHF8-203ENST00000338946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.99■■□□□ 1.111e-6■■■■□ 19.6
PHF8-203ENST00000338946 PLEKHD1A6NEE1 506 aa21.98■■□□□ 1.11
PHF8-203ENST00000338946 ANP32CO43423 234 aa21.92■■□□□ 1.1
PHF8-203ENST00000338946 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
PHF8-203ENST00000338946 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
PHF8-203ENST00000338946 TONSLQ96HA7 1378 aa21.86■■□□□ 1.09
PHF8-203ENST00000338946 SMARCA2P51531 1590 aa21.85■■□□□ 1.09
PHF8-203ENST00000338946 MYO15BQ96JP2 1530 aa21.84■■□□□ 1.09
PHF8-203ENST00000338946 PDS5BQ9NTI5 1447 aa21.83■■□□□ 1.09
PHF8-203ENST00000338946 NEFMP07197 916 aa21.79■■□□□ 1.08
PHF8-203ENST00000338946 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
PHF8-203ENST00000338946 CUX2O14529 1486 aa21.77■■□□□ 1.08
PHF8-203ENST00000338946 DAXXQ9UER7 740 aaPredicted RBP21.77■■□□□ 1.08
PHF8-203ENST00000338946 CEP162Q5TB80 1403 aa21.77■■□□□ 1.08
PHF8-203ENST00000338946 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.08
PHF8-203ENST00000338946 SLC24A1O60721 1099 aa21.76■■□□□ 1.07
PHF8-203ENST00000338946 CFDP1Q9UEE9 299 aaPredicted RBP21.74■■□□□ 1.07
PHF8-203ENST00000338946 CCDC88BA6NC98 1476 aa21.73■■□□□ 1.07
PHF8-203ENST00000338946 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
PHF8-203ENST00000338946 RRP7BPQ9NSQ0 103 aa21.72■■□□□ 1.07
PHF8-203ENST00000338946 CLSPNQ9HAW4 1339 aa21.7■■□□□ 1.06
PHF8-203ENST00000338946 TNIKQ9UKE5 1360 aa21.68■■□□□ 1.06
PHF8-203ENST00000338946 ARID4BQ4LE39 1312 aaPredicted RBP21.66■■□□□ 1.06
PHF8-203ENST00000338946 KDM2AQ9Y2K7 1162 aa21.65■■□□□ 1.06
PHF8-203ENST00000338946 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
PHF8-203ENST00000338946 TDRD9Q8NDG6 1382 aaKnown RBP21.63■■□□□ 1.05
PHF8-203ENST00000338946 SOGA1O94964 1423 aa21.61■■□□□ 1.05
PHF8-203ENST00000338946 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms