Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA5P30532 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHRNA5P30532 RPL35-206ENST00000629845 340 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA5P30532 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA5P30532 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA5P30532 TNRC18P3-201ENST00000441896 2691 ntBASIC18.59■□□□□ 0.57
CHRNA5P30532 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA5P30532 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA5P30532 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA5P30532 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA5P30532 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA5P30532 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CHRNA5P30532 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA5P30532 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA5P30532 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CHRNA5P30532 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CHRNA5P30532 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.58■□□□□ 0.57
CHRNA5P30532 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.58■□□□□ 0.57
CHRNA5P30532 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA5P30532 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA5P30532 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA5P30532 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.58■□□□□ 0.56
CHRNA5P30532 AC078875.1-201ENST00000431907 724 ntBASIC18.58■□□□□ 0.56
CHRNA5P30532 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA5P30532 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.58■□□□□ 0.56
CHRNA5P30532 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CHRNA5P30532 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CHRNA5P30532 AL157813.1-201ENST00000612996 587 ntBASIC18.58■□□□□ 0.56
CHRNA5P30532 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA5P30532 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA5P30532 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA5P30532 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA5P30532 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA5P30532 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA5P30532 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA5P30532 PKD1P1-201ENST00000458669 6805 ntBASIC18.57■□□□□ 0.56
CHRNA5P30532 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CHRNA5P30532 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHRNA5P30532 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CHRNA5P30532 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA5P30532 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA5P30532 RN7SKP230-201ENST00000365642 335 ntBASIC18.57■□□□□ 0.56
CHRNA5P30532 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA5P30532 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA5P30532 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA5P30532 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.57■□□□□ 0.56
CHRNA5P30532 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.57■□□□□ 0.56
CHRNA5P30532 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.57■□□□□ 0.56
CHRNA5P30532 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.57■□□□□ 0.56
CHRNA5P30532 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.57■□□□□ 0.56
CHRNA5P30532 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.57■□□□□ 0.56
CHRNA5P30532 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA5P30532 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA5P30532 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA5P30532 LINC02447-202ENST00000501888 2146 ntBASIC18.56■□□□□ 0.56
CHRNA5P30532 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA5P30532 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA5P30532 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA5P30532 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA5P30532 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA5P30532 AL360270.3-201ENST00000609118 1348 ntBASIC18.56■□□□□ 0.56
CHRNA5P30532 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA5P30532 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA5P30532 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA5P30532 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA5P30532 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA5P30532 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA5P30532 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA5P30532 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA5P30532 AC010234.1-201ENST00000494599 870 ntBASIC18.56■□□□□ 0.56
CHRNA5P30532 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CHRNA5P30532 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHRNA5P30532 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms