RNA–Protein interactions for RNA: ENST00000266557.3

CD27-201, Transcript of CD27 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD27, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD27-201ENST00000266557 NISCHQ9Y2I1 1504 aa35.36■■■■□ 3.25
CD27-201ENST00000266557 CCDC180Q9P1Z9 1646 aa31.34■■■□□ 2.61
CD27-201ENST00000266557 ABCC9O60706 1549 aa30.11■■■□□ 2.41
CD27-201ENST00000266557 ZCCHC6Q5VYS8 1495 aaKnown RBP29.58■■■□□ 2.33
CD27-201ENST00000266557 DCAF1Q9Y4B6 1507 aa29.28■■■□□ 2.28
CD27-201ENST00000266557 NACADO15069 1562 aa29.27■■■□□ 2.28
CD27-201ENST00000266557 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
CD27-201ENST00000266557 MYO15BQ96JP2 1530 aa29.23■■■□□ 2.27
CD27-201ENST00000266557 RB1CC1Q8TDY2 1594 aa29.2■■■□□ 2.27
CD27-201ENST00000266557 UNC13AQ9UPW8 1703 aa28.69■■■□□ 2.18
CD27-201ENST00000266557 SCRIBQ14160 1630 aa28.59■■■□□ 2.17
CD27-201ENST00000266557 BICRAQ9NZM4 1560 aa28.32■■■□□ 2.12
CD27-201ENST00000266557 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
CD27-201ENST00000266557 PABPN1Q86U42 306 aaKnown RBP eCLIP28.15■■■□□ 2.1
CD27-201ENST00000266557 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
CD27-201ENST00000266557 CECR2Q9BXF3 1484 aa27.48■■□□□ 1.99
CD27-201ENST00000266557 SMARCA4P51532 1647 aa27.4■■□□□ 1.98
CD27-201ENST00000266557 BAZ1AQ9NRL2 1556 aaPredicted RBP27.39■■□□□ 1.98
CD27-201ENST00000266557 CC2D2AQ9P2K1 1620 aa27.3■■□□□ 1.96
CD27-201ENST00000266557 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
CD27-201ENST00000266557 DNAJC5BQ9UF47 199 aa27.14■■□□□ 1.93
CD27-201ENST00000266557 PEG3Q9GZU2 1588 aa27.1■■□□□ 1.93
CD27-201ENST00000266557 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
CD27-201ENST00000266557 SMARCA2P51531 1590 aa27.08■■□□□ 1.93
CD27-201ENST00000266557 WIZO95785 1651 aa27.05■■□□□ 1.92
CD27-201ENST00000266557 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
CD27-201ENST00000266557 NCAPD3P42695 1498 aa26.95■■□□□ 1.9
CD27-201ENST00000266557 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
CD27-201ENST00000266557 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
CD27-201ENST00000266557 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
CD27-201ENST00000266557 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
CD27-201ENST00000266557 CCDC88BA6NC98 1476 aa26.4■■□□□ 1.82
CD27-201ENST00000266557 LAMC3Q9Y6N6 1575 aa26.23■■□□□ 1.79
CD27-201ENST00000266557 NESP48681 1621 aa26.2■■□□□ 1.78
CD27-201ENST00000266557 PRDM2Q13029 1718 aa26.19■■□□□ 1.78
CD27-201ENST00000266557 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
CD27-201ENST00000266557 CFTRP13569 1480 aa26.14■■□□□ 1.78
CD27-201ENST00000266557 KIF21AQ7Z4S6 1674 aa26.02■■□□□ 1.76
CD27-201ENST00000266557 PDS5BQ9NTI5 1447 aa25.97■■□□□ 1.75
CD27-201ENST00000266557 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
CD27-201ENST00000266557 ERCC6Q03468 1493 aa25.89■■□□□ 1.74
CD27-201ENST00000266557 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
CD27-201ENST00000266557 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
CD27-201ENST00000266557 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
CD27-201ENST00000266557 WDR62O43379 1518 aa25.65■■□□□ 1.7
CD27-201ENST00000266557 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
CD27-201ENST00000266557 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
CD27-201ENST00000266557 DNMBPQ6XZF7 1577 aa25.61■■□□□ 1.69
CD27-201ENST00000266557 TOPBP1Q92547 1522 aa25.57■■□□□ 1.68
CD27-201ENST00000266557 CUX1P39880 1505 aa25.56■■□□□ 1.68
CD27-201ENST00000266557 WRNQ14191 1432 aaPredicted RBP eCLIP25.53■■□□□ 1.68
CD27-201ENST00000266557 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
CD27-201ENST00000266557 SYNJ1O43426 1573 aa25.52■■□□□ 1.68
CD27-201ENST00000266557 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
CD27-201ENST00000266557 CUX2O14529 1486 aa25.47■■□□□ 1.67
CD27-201ENST00000266557 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.66
CD27-201ENST00000266557 POLA1P09884 1462 aaPredicted RBP25.38■■□□□ 1.65
CD27-201ENST00000266557 TARBP1Q13395 1621 aaKnown RBP25.3■■□□□ 1.64
CD27-201ENST00000266557 WDR97A6NE52 1622 aa25.27■■□□□ 1.64
CD27-201ENST00000266557 IFT140Q96RY7 1462 aa25.27■■□□□ 1.64
CD27-201ENST00000266557 RAD54L2Q9Y4B4 1467 aa25.24■■□□□ 1.63
CD27-201ENST00000266557 SOGA1O94964 1423 aa25.24■■□□□ 1.63
CD27-201ENST00000266557 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
CD27-201ENST00000266557 TRIM41Q8WV44 630 aa25.18■■□□□ 1.62
CD27-201ENST00000266557 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
CD27-201ENST00000266557 ZNF608Q9ULD9 1512 aaPredicted RBP25.13■■□□□ 1.61
CD27-201ENST00000266557 EIF4G3O43432 1585 aaKnown RBP25.12■■□□□ 1.61
CD27-201ENST00000266557 ABCA5Q8WWZ7 1642 aa25.09■■□□□ 1.61
CD27-201ENST00000266557 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
CD27-201ENST00000266557 AQRO60306 1485 aaKnown RBP eCLIP25.02■■□□□ 1.6
CD27-201ENST00000266557 TDRD9Q8NDG6 1382 aaKnown RBP25.02■■□□□ 1.6
CD27-201ENST00000266557 GAPVD1Q14C86 1478 aa24.99■■□□□ 1.59
CD27-201ENST00000266557 KIF27Q86VH2 1401 aa24.95■■□□□ 1.58
CD27-201ENST00000266557 GRIN2BQ13224 1484 aa24.92■■□□□ 1.58
CD27-201ENST00000266557 RUSC2Q8N2Y8 1516 aa24.89■■□□□ 1.58
CD27-201ENST00000266557 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
CD27-201ENST00000266557 SNAPC4Q5SXM2 1469 aa24.84■■□□□ 1.57
CD27-201ENST00000266557 MAGI1Q96QZ7 1491 aaPredicted RBP24.81■■□□□ 1.56
CD27-201ENST00000266557 ADAMTS12P58397 1594 aa24.81■■□□□ 1.56
CD27-201ENST00000266557 CUL7Q14999 1698 aa24.8■■□□□ 1.56
CD27-201ENST00000266557 EEA1Q15075 1411 aa24.79■■□□□ 1.56
CD27-201ENST00000266557 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
CD27-201ENST00000266557 CHD1O14646 1710 aa24.77■■□□□ 1.56
CD27-201ENST00000266557 IGF1RP08069 1367 aa24.75■■□□□ 1.55
CD27-201ENST00000266557 SYNJ2O15056 1496 aa24.7■■□□□ 1.55
CD27-201ENST00000266557 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.54
CD27-201ENST00000266557 FAM9AQ8IZU1 332 aaPredicted RBP24.66■■□□□ 1.54
CD27-201ENST00000266557 CARMIL1Q5VZK9 1371 aa24.64■■□□□ 1.53
CD27-201ENST00000266557 CSRNP3Q8WYN3 585 aa24.62■■□□□ 1.53
CD27-201ENST00000266557 GRIN2AQ12879 1464 aa24.61■■□□□ 1.53
CD27-201ENST00000266557 PRXQ9BXM0 1461 aa24.6■■□□□ 1.53
CD27-201ENST00000266557 CHMP7Q8WUX9 453 aaPredicted RBP24.59■■□□□ 1.53
CD27-201ENST00000266557 FBLN2P98095 1184 aa24.58■■□□□ 1.52
CD27-201ENST00000266557 KIF21BO75037 1637 aa24.58■■□□□ 1.52
CD27-201ENST00000266557 RAPGEF2Q9Y4G8 1499 aa24.56■■□□□ 1.52
CD27-201ENST00000266557 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
CD27-201ENST00000266557 NUP160Q12769 1436 aa24.47■■□□□ 1.51
CD27-201ENST00000266557 CTTNBP2Q8WZ74 1663 aa24.46■■□□□ 1.51
CD27-201ENST00000266557 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
CD27-201ENST00000266557 GOLGA3Q08378 1498 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms