RNA–Protein interactions for RNA: ENST00000311388.7

DEPDC7-202, Transcript of DEP domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene DEPDC7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-202ENST00000311388 NISCHQ9Y2I1 1504 aa35.6■■■■□ 3.29
DEPDC7-202ENST00000311388 CCDC180Q9P1Z9 1646 aa30.85■■■□□ 2.53
DEPDC7-202ENST00000311388 ZCCHC6Q5VYS8 1495 aaKnown RBP29.96■■■□□ 2.39
DEPDC7-202ENST00000311388 DCAF1Q9Y4B6 1507 aa29.38■■■□□ 2.29
DEPDC7-202ENST00000311388 DCAF8L2P0C7V8 631 aa29.35■■■□□ 2.29
DEPDC7-202ENST00000311388 SHROOM4Q9ULL8 1493 aa29.34■■■□□ 2.29
DEPDC7-202ENST00000311388 ABCC9O60706 1549 aa29.02■■■□□ 2.24
DEPDC7-202ENST00000311388 MYO15BQ96JP2 1530 aa28.9■■■□□ 2.22
DEPDC7-202ENST00000311388 NACADO15069 1562 aa28.67■■■□□ 2.18
DEPDC7-202ENST00000311388 SCRIBQ14160 1630 aa28.5■■■□□ 2.15
DEPDC7-202ENST00000311388 RB1CC1Q8TDY2 1594 aa28.35■■■□□ 2.13
DEPDC7-202ENST00000311388 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
DEPDC7-202ENST00000311388 UNC13AQ9UPW8 1703 aa27.9■■■□□ 2.06
DEPDC7-202ENST00000311388 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.03
DEPDC7-202ENST00000311388 CECR2Q9BXF3 1484 aa27.71■■■□□ 2.03
DEPDC7-202ENST00000311388 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
DEPDC7-202ENST00000311388 MROH2BQ7Z745 1585 aa27.57■■■□□ 2
DEPDC7-202ENST00000311388 PABPN1Q86U42 306 aaKnown RBP eCLIP27.46■■□□□ 1.99
DEPDC7-202ENST00000311388 BAZ1AQ9NRL2 1556 aaPredicted RBP27.43■■□□□ 1.98
DEPDC7-202ENST00000311388 WIZO95785 1651 aa27.37■■□□□ 1.97
DEPDC7-202ENST00000311388 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
DEPDC7-202ENST00000311388 CHIC1Q5VXU3 224 aa27.29■■□□□ 1.96
DEPDC7-202ENST00000311388 TOP2AP11388 1531 aaKnown RBP27.02■■□□□ 1.92
DEPDC7-202ENST00000311388 PEG3Q9GZU2 1588 aa26.94■■□□□ 1.9
DEPDC7-202ENST00000311388 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
DEPDC7-202ENST00000311388 CCDC88BA6NC98 1476 aa26.8■■□□□ 1.88
DEPDC7-202ENST00000311388 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
DEPDC7-202ENST00000311388 EIF4G1Q04637 1599 aaKnown RBP26.74■■□□□ 1.87
DEPDC7-202ENST00000311388 BAZ1BQ9UIG0 1483 aaKnown RBP26.64■■□□□ 1.85
DEPDC7-202ENST00000311388 TRIM41Q8WV44 630 aa26.58■■□□□ 1.85
DEPDC7-202ENST00000311388 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
DEPDC7-202ENST00000311388 HMGXB3Q12766 1538 aa26.45■■□□□ 1.83
DEPDC7-202ENST00000311388 ABCC8Q09428 1581 aa26.36■■□□□ 1.81
DEPDC7-202ENST00000311388 LOC105371045A0A1W2PR82 267 aa26.31■■□□□ 1.8
DEPDC7-202ENST00000311388 CC2D2AQ9P2K1 1620 aa26.24■■□□□ 1.79
DEPDC7-202ENST00000311388 FAM9AQ8IZU1 332 aaPredicted RBP26.17■■□□□ 1.78
DEPDC7-202ENST00000311388 WRNQ14191 1432 aaPredicted RBP eCLIP26.08■■□□□ 1.77
DEPDC7-202ENST00000311388 SYNJ1O43426 1573 aa26.02■■□□□ 1.76
DEPDC7-202ENST00000311388 CFTRP13569 1480 aa25.99■■□□□ 1.75
DEPDC7-202ENST00000311388 SOGA1O94964 1423 aa25.93■■□□□ 1.74
DEPDC7-202ENST00000311388 PRDM2Q13029 1718 aa25.86■■□□□ 1.73
DEPDC7-202ENST00000311388 TOP2BQ02880 1626 aa25.85■■□□□ 1.73
DEPDC7-202ENST00000311388 RUSC2Q8N2Y8 1516 aa25.85■■□□□ 1.73
DEPDC7-202ENST00000311388 EHMT2Q96KQ7 1210 aa25.84■■□□□ 1.73
DEPDC7-202ENST00000311388 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
DEPDC7-202ENST00000311388 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
DEPDC7-202ENST00000311388 EEA1Q15075 1411 aa25.8■■□□□ 1.72
DEPDC7-202ENST00000311388 CUX1P39880 1505 aa25.75■■□□□ 1.71
DEPDC7-202ENST00000311388 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
DEPDC7-202ENST00000311388 DNAJC5BQ9UF47 199 aa25.63■■□□□ 1.69
DEPDC7-202ENST00000311388 NESP48681 1621 aa25.6■■□□□ 1.69
DEPDC7-202ENST00000311388 FANCD2Q9BXW9 1451 aa25.56■■□□□ 1.68
DEPDC7-202ENST00000311388 LAMC3Q9Y6N6 1575 aa25.52■■□□□ 1.68
DEPDC7-202ENST00000311388 KIF21BO75037 1637 aa25.51■■□□□ 1.67
DEPDC7-202ENST00000311388 GOLGA3Q08378 1498 aa25.5■■□□□ 1.67
DEPDC7-202ENST00000311388 TNIKQ9UKE5 1360 aa25.5■■□□□ 1.67
DEPDC7-202ENST00000311388 CEP164Q9UPV0 1460 aa25.48■■□□□ 1.67
DEPDC7-202ENST00000311388 CEP162Q5TB80 1403 aa25.4■■□□□ 1.66
DEPDC7-202ENST00000311388 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
DEPDC7-202ENST00000311388 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
DEPDC7-202ENST00000311388 KIF27Q86VH2 1401 aa25.37■■□□□ 1.65
DEPDC7-202ENST00000311388 DNMBPQ6XZF7 1577 aa25.37■■□□□ 1.65
DEPDC7-202ENST00000311388 RAPGEF2Q9Y4G8 1499 aa25.36■■□□□ 1.65
DEPDC7-202ENST00000311388 PCGF6Q9BYE7 350 aa25.36■■□□□ 1.65
DEPDC7-202ENST00000311388 TOPBP1Q92547 1522 aa25.33■■□□□ 1.65
DEPDC7-202ENST00000311388 PRXQ9BXM0 1461 aa25.32■■□□□ 1.64
DEPDC7-202ENST00000311388 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
DEPDC7-202ENST00000311388 CUX2O14529 1486 aa25.28■■□□□ 1.64
DEPDC7-202ENST00000311388 URB2Q14146 1524 aaKnown RBP25.27■■□□□ 1.64
DEPDC7-202ENST00000311388 ERICH3Q5RHP9 1530 aa25.26■■□□□ 1.63
DEPDC7-202ENST00000311388 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
DEPDC7-202ENST00000311388 POLA1P09884 1462 aaPredicted RBP25.23■■□□□ 1.63
DEPDC7-202ENST00000311388 TRIM26Q12899 539 aaPredicted RBP25.23■■□□□ 1.63
DEPDC7-202ENST00000311388 RAD54L2Q9Y4B4 1467 aa25.19■■□□□ 1.62
DEPDC7-202ENST00000311388 IGF1RP08069 1367 aa25.18■■□□□ 1.62
DEPDC7-202ENST00000311388 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
DEPDC7-202ENST00000311388 CLIP1P30622 1438 aa25.13■■□□□ 1.61
DEPDC7-202ENST00000311388 WDR97A6NE52 1622 aa25.07■■□□□ 1.6
DEPDC7-202ENST00000311388 PPARGC1BQ86YN6 1023 aaKnown RBP25.07■■□□□ 1.6
DEPDC7-202ENST00000311388 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
DEPDC7-202ENST00000311388 MRC2Q9UBG0 1479 aa24.99■■□□□ 1.59
DEPDC7-202ENST00000311388 RANGAP1P46060 587 aaPredicted RBP24.98■■□□□ 1.59
DEPDC7-202ENST00000311388 VPS8Q8N3P4 1428 aa24.95■■□□□ 1.58
DEPDC7-202ENST00000311388 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
DEPDC7-202ENST00000311388 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
DEPDC7-202ENST00000311388 TDRD9Q8NDG6 1382 aaKnown RBP24.91■■□□□ 1.58
DEPDC7-202ENST00000311388 ARAP1Q96P48 1450 aa24.89■■□□□ 1.58
DEPDC7-202ENST00000311388 CUL7Q14999 1698 aa24.89■■□□□ 1.58
DEPDC7-202ENST00000311388 GAPVD1Q14C86 1478 aa24.87■■□□□ 1.57
DEPDC7-202ENST00000311388 WDR62O43379 1518 aa24.85■■□□□ 1.57
DEPDC7-202ENST00000311388 HRCP23327 699 aa24.85■■□□□ 1.57
DEPDC7-202ENST00000311388 ARHGAP35Q9NRY4 1499 aa24.82■■□□□ 1.56
DEPDC7-202ENST00000311388 TTBK1Q5TCY1 1321 aaPredicted RBP24.79■■□□□ 1.56
DEPDC7-202ENST00000311388 ERCC6Q03468 1493 aa24.78■■□□□ 1.56
DEPDC7-202ENST00000311388 THOC2Q8NI27 1593 aaKnown RBP24.74■■□□□ 1.55
DEPDC7-202ENST00000311388 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
DEPDC7-202ENST00000311388 IFT140Q96RY7 1462 aa24.71■■□□□ 1.55
DEPDC7-202ENST00000311388 AQRO60306 1485 aaKnown RBP eCLIP24.71■■□□□ 1.55
DEPDC7-202ENST00000311388 CTTNBP2Q8WZ74 1663 aa24.69■■□□□ 1.54
DEPDC7-202ENST00000311388 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms