RNA–Protein interactions for RNA: ENST00000615215.4

NBL1-210, Transcript of NBL1, DAN family BMP antagonist, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NBL1, Length 2,160 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBL1-210ENST00000615215 NISCHQ9Y2I1 1504 aa35.43■■■■□ 3.26
NBL1-210ENST00000615215 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
NBL1-210ENST00000615215 SHROOM4Q9ULL8 1493 aa30.02■■■□□ 2.4
NBL1-210ENST00000615215 ZCCHC6Q5VYS8 1495 aaKnown RBP29.92■■■□□ 2.38
NBL1-210ENST00000615215 DCAF8L2P0C7V8 631 aa29.46■■■□□ 2.31
NBL1-210ENST00000615215 ABCC9O60706 1549 aa29.44■■■□□ 2.3
NBL1-210ENST00000615215 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
NBL1-210ENST00000615215 DCAF1Q9Y4B6 1507 aa29.05■■■□□ 2.24
NBL1-210ENST00000615215 HRCP23327 699 aa28.84■■■□□ 2.21
NBL1-210ENST00000615215 CHIC1Q5VXU3 224 aa28.34■■■□□ 2.13
NBL1-210ENST00000615215 SCRIBQ14160 1630 aa28.33■■■□□ 2.13
NBL1-210ENST00000615215 MYO15BQ96JP2 1530 aa28.31■■■□□ 2.12
NBL1-210ENST00000615215 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
NBL1-210ENST00000615215 NACADO15069 1562 aa28.24■■■□□ 2.11
NBL1-210ENST00000615215 PCGF6Q9BYE7 350 aa28.11■■■□□ 2.09
NBL1-210ENST00000615215 RSF1Q96T23 1441 aaPredicted RBP27.94■■■□□ 2.06
NBL1-210ENST00000615215 PPARGC1BQ86YN6 1023 aaKnown RBP27.92■■■□□ 2.06
NBL1-210ENST00000615215 PELP1Q8IZL8 1130 aaKnown RBP27.82■■■□□ 2.04
NBL1-210ENST00000615215 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.02
NBL1-210ENST00000615215 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
NBL1-210ENST00000615215 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
NBL1-210ENST00000615215 LOC105371045A0A1W2PR82 267 aa27.52■■■□□ 2
NBL1-210ENST00000615215 TRIM26Q12899 539 aaPredicted RBP27.5■■□□□ 1.99
NBL1-210ENST00000615215 PABPN1Q86U42 306 aaKnown RBP eCLIP27.49■■□□□ 1.99
NBL1-210ENST00000615215 WIZO95785 1651 aa27.41■■□□□ 1.98
NBL1-210ENST00000615215 ZEB1P37275 1124 aaPredicted RBP27.38■■□□□ 1.97
NBL1-210ENST00000615215 BICRAQ9NZM4 1560 aa27.37■■□□□ 1.97
NBL1-210ENST00000615215 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
NBL1-210ENST00000615215 BAZ1AQ9NRL2 1556 aaPredicted RBP27.22■■□□□ 1.95
NBL1-210ENST00000615215 FAM9AQ8IZU1 332 aaPredicted RBP27.08■■□□□ 1.93
NBL1-210ENST00000615215 SCAF1Q9H7N4 1312 aaKnown RBP27.06■■□□□ 1.92
NBL1-210ENST00000615215 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
NBL1-210ENST00000615215 DNAJC5BQ9UF47 199 aa27.02■■□□□ 1.92
NBL1-210ENST00000615215 TOP2AP11388 1531 aaKnown RBP26.93■■□□□ 1.9
NBL1-210ENST00000615215 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
NBL1-210ENST00000615215 EHMT2Q96KQ7 1210 aa26.87■■□□□ 1.89
NBL1-210ENST00000615215 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
NBL1-210ENST00000615215 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
NBL1-210ENST00000615215 MYT1Q01538 1121 aa26.78■■□□□ 1.88
NBL1-210ENST00000615215 ABCC8Q09428 1581 aa26.69■■□□□ 1.86
NBL1-210ENST00000615215 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
NBL1-210ENST00000615215 ACIN1Q9UKV3 1341 aaKnown RBP26.56■■□□□ 1.84
NBL1-210ENST00000615215 PEG3Q9GZU2 1588 aa26.54■■□□□ 1.84
NBL1-210ENST00000615215 ATAD2BQ9ULI0 1458 aa26.43■■□□□ 1.82
NBL1-210ENST00000615215 SOGA1O94964 1423 aa26.38■■□□□ 1.81
NBL1-210ENST00000615215 NEUROD1Q13562 356 aa26.37■■□□□ 1.81
NBL1-210ENST00000615215 CENPBP07199 599 aaPredicted RBP26.32■■□□□ 1.8
NBL1-210ENST00000615215 BAZ1BQ9UIG0 1483 aaKnown RBP26.32■■□□□ 1.8
NBL1-210ENST00000615215 RUSC2Q8N2Y8 1516 aa26.28■■□□□ 1.8
NBL1-210ENST00000615215 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
NBL1-210ENST00000615215 GTF3C3Q9Y5Q9 886 aa26.22■■□□□ 1.79
NBL1-210ENST00000615215 CSRNP3Q8WYN3 585 aa26.16■■□□□ 1.78
NBL1-210ENST00000615215 SYNJ1O43426 1573 aa26.15■■□□□ 1.78
NBL1-210ENST00000615215 DIEXFQ68CQ4 756 aaKnown RBP26.15■■□□□ 1.78
NBL1-210ENST00000615215 CCER1Q8TC90 406 aaPredicted RBP26.14■■□□□ 1.78
NBL1-210ENST00000615215 EEA1Q15075 1411 aa26.11■■□□□ 1.77
NBL1-210ENST00000615215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.09■■□□□ 1.77
NBL1-210ENST00000615215 CEP162Q5TB80 1403 aa26.08■■□□□ 1.77
NBL1-210ENST00000615215 TNIKQ9UKE5 1360 aa26.05■■□□□ 1.76
NBL1-210ENST00000615215 NCAPD3P42695 1498 aa26.03■■□□□ 1.76
NBL1-210ENST00000615215 UBTFP17480 764 aaKnown RBP26.02■■□□□ 1.76
NBL1-210ENST00000615215 GOLGA3Q08378 1498 aa25.95■■□□□ 1.74
NBL1-210ENST00000615215 TTBK1Q5TCY1 1321 aaPredicted RBP25.92■■□□□ 1.74
NBL1-210ENST00000615215 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
NBL1-210ENST00000615215 CEP164Q9UPV0 1460 aa25.83■■□□□ 1.73
NBL1-210ENST00000615215 TOP2BQ02880 1626 aa25.83■■□□□ 1.73
NBL1-210ENST00000615215 KIF21BO75037 1637 aa25.81■■□□□ 1.72
NBL1-210ENST00000615215 ZNF316A6NFI3 1004 aaPredicted RBP25.76■■□□□ 1.71
NBL1-210ENST00000615215 BIVM-ERCC5R4GMW8 1640 aa25.75■■□□□ 1.71
NBL1-210ENST00000615215 RAPGEF2Q9Y4G8 1499 aa25.74■■□□□ 1.71
NBL1-210ENST00000615215 CUX1P39880 1505 aa25.67■■□□□ 1.7
NBL1-210ENST00000615215 CFTRP13569 1480 aa25.67■■□□□ 1.7
NBL1-210ENST00000615215 CLIP1P30622 1438 aa25.65■■□□□ 1.7
NBL1-210ENST00000615215 RANGAP1P46060 587 aaPredicted RBP25.62■■□□□ 1.69
NBL1-210ENST00000615215 PRXQ9BXM0 1461 aa25.5■■□□□ 1.67
NBL1-210ENST00000615215 VPS8Q8N3P4 1428 aa25.5■■□□□ 1.67
NBL1-210ENST00000615215 YTHDC1Q96MU7 727 aaKnown RBP25.46■■□□□ 1.67
NBL1-210ENST00000615215 PRDM2Q13029 1718 aa25.45■■□□□ 1.66
NBL1-210ENST00000615215 ERICH3Q5RHP9 1530 aa25.44■■□□□ 1.66
NBL1-210ENST00000615215 KIF27Q86VH2 1401 aa25.43■■□□□ 1.66
NBL1-210ENST00000615215 ERCC6Q03468 1493 aa25.43■■□□□ 1.66
NBL1-210ENST00000615215 MIER1Q8N108 512 aa25.43■■□□□ 1.66
NBL1-210ENST00000615215 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
NBL1-210ENST00000615215 CLSPNQ9HAW4 1339 aa25.42■■□□□ 1.66
NBL1-210ENST00000615215 NESP48681 1621 aa25.42■■□□□ 1.66
NBL1-210ENST00000615215 LAMC3Q9Y6N6 1575 aa25.38■■□□□ 1.65
NBL1-210ENST00000615215 APLP2Q06481 763 aa25.33■■□□□ 1.65
NBL1-210ENST00000615215 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
NBL1-210ENST00000615215 HNRNPUL2Q1KMD3 747 aaKnown RBP25.29■■□□□ 1.64
NBL1-210ENST00000615215 CUX2O14529 1486 aa25.28■■□□□ 1.64
NBL1-210ENST00000615215 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
NBL1-210ENST00000615215 PDS5BQ9NTI5 1447 aa25.24■■□□□ 1.63
NBL1-210ENST00000615215 IGF1RP08069 1367 aa25.22■■□□□ 1.63
NBL1-210ENST00000615215 FANCD2Q9BXW9 1451 aa25.19■■□□□ 1.62
NBL1-210ENST00000615215 KANK4Q5T7N3 995 aaPredicted RBP25.15■■□□□ 1.62
NBL1-210ENST00000615215 ARHGAP35Q9NRY4 1499 aa25.14■■□□□ 1.61
NBL1-210ENST00000615215 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
NBL1-210ENST00000615215 CARMIL1Q5VZK9 1371 aa25.09■■□□□ 1.61
NBL1-210ENST00000615215 SUPT16HQ9Y5B9 1047 aaKnown RBP25.08■■□□□ 1.61
NBL1-210ENST00000615215 THOC2Q8NI27 1593 aaKnown RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms