RNA–Protein interactions for RNA: ENST00000423158.3

NTF3-202, Transcript of neurotrophin 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NTF3, Length 1,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3-202ENST00000423158 NISCHQ9Y2I1 1504 aa34.27■■■■□ 3.08
NTF3-202ENST00000423158 ABCC9O60706 1549 aa31.76■■■□□ 2.68
NTF3-202ENST00000423158 CCDC180Q9P1Z9 1646 aa31.08■■■□□ 2.57
NTF3-202ENST00000423158 DNAJC5BQ9UF47 199 aa30.46■■■□□ 2.47
NTF3-202ENST00000423158 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
NTF3-202ENST00000423158 NACADO15069 1562 aa29.52■■■□□ 2.32
NTF3-202ENST00000423158 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
NTF3-202ENST00000423158 UNC13AQ9UPW8 1703 aa29.34■■■□□ 2.29
NTF3-202ENST00000423158 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
NTF3-202ENST00000423158 DCAF8L2P0C7V8 631 aa29.13■■■□□ 2.25
NTF3-202ENST00000423158 MYO15BQ96JP2 1530 aa28.87■■■□□ 2.21
NTF3-202ENST00000423158 CC2D2AQ9P2K1 1620 aa28.68■■■□□ 2.18
NTF3-202ENST00000423158 CECR2Q9BXF3 1484 aa28.67■■■□□ 2.18
NTF3-202ENST00000423158 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
NTF3-202ENST00000423158 EIF4G1Q04637 1599 aaKnown RBP28.44■■■□□ 2.14
NTF3-202ENST00000423158 DNAJC5Q9H3Z4 198 aa28.43■■■□□ 2.14
NTF3-202ENST00000423158 SCRIBQ14160 1630 aa28.29■■■□□ 2.12
NTF3-202ENST00000423158 ZCCHC6Q5VYS8 1495 aaKnown RBP28.27■■■□□ 2.12
NTF3-202ENST00000423158 DCAF1Q9Y4B6 1507 aa28.25■■■□□ 2.11
NTF3-202ENST00000423158 CUX2O14529 1486 aa27.65■■■□□ 2.02
NTF3-202ENST00000423158 ERCC6Q03468 1493 aa27.43■■□□□ 1.98
NTF3-202ENST00000423158 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
NTF3-202ENST00000423158 NESP48681 1621 aa27.11■■□□□ 1.93
NTF3-202ENST00000423158 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
NTF3-202ENST00000423158 HMGXB3Q12766 1538 aa27.02■■□□□ 1.92
NTF3-202ENST00000423158 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.91
NTF3-202ENST00000423158 SMARCA2P51531 1590 aa26.96■■□□□ 1.91
NTF3-202ENST00000423158 SMARCA4P51532 1647 aa26.92■■□□□ 1.9
NTF3-202ENST00000423158 TRIM41Q8WV44 630 aa26.88■■□□□ 1.89
NTF3-202ENST00000423158 BAZ1BQ9UIG0 1483 aaKnown RBP26.78■■□□□ 1.88
NTF3-202ENST00000423158 LAMC3Q9Y6N6 1575 aa26.77■■□□□ 1.88
NTF3-202ENST00000423158 KIF21AQ7Z4S6 1674 aa26.77■■□□□ 1.88
NTF3-202ENST00000423158 PEG3Q9GZU2 1588 aa26.65■■□□□ 1.86
NTF3-202ENST00000423158 BAZ1AQ9NRL2 1556 aaPredicted RBP26.63■■□□□ 1.85
NTF3-202ENST00000423158 PDS5BQ9NTI5 1447 aa26.59■■□□□ 1.85
NTF3-202ENST00000423158 MRC2Q9UBG0 1479 aa26.45■■□□□ 1.82
NTF3-202ENST00000423158 WDR62O43379 1518 aa26.44■■□□□ 1.82
NTF3-202ENST00000423158 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
NTF3-202ENST00000423158 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
NTF3-202ENST00000423158 OSCARQ8IYS5 282 aa26.2■■□□□ 1.79
NTF3-202ENST00000423158 CEP164Q9UPV0 1460 aa26.19■■□□□ 1.78
NTF3-202ENST00000423158 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
NTF3-202ENST00000423158 WIZO95785 1651 aa26.08■■□□□ 1.77
NTF3-202ENST00000423158 RIMBP3CA6NJZ7 1639 aa26.06■■□□□ 1.76
NTF3-202ENST00000423158 RIMBP3BA6NNM3 1639 aa26.06■■□□□ 1.76
NTF3-202ENST00000423158 RIMBP3Q9UFD9 1639 aa26.06■■□□□ 1.76
NTF3-202ENST00000423158 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
NTF3-202ENST00000423158 CFTRP13569 1480 aa25.96■■□□□ 1.75
NTF3-202ENST00000423158 ARHGEF11O15085 1522 aa25.88■■□□□ 1.73
NTF3-202ENST00000423158 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
NTF3-202ENST00000423158 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
NTF3-202ENST00000423158 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
NTF3-202ENST00000423158 TOP2AP11388 1531 aaKnown RBP25.67■■□□□ 1.7
NTF3-202ENST00000423158 CYB5RLQ6IPT4 315 aa25.66■■□□□ 1.7
NTF3-202ENST00000423158 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
NTF3-202ENST00000423158 ARAP1Q96P48 1450 aa25.59■■□□□ 1.69
NTF3-202ENST00000423158 RSF1Q96T23 1441 aaPredicted RBP25.59■■□□□ 1.69
NTF3-202ENST00000423158 TRHP20396 242 aaPredicted RBP25.59■■□□□ 1.69
NTF3-202ENST00000423158 CHD1O14646 1710 aa25.57■■□□□ 1.68
NTF3-202ENST00000423158 TOPBP1Q92547 1522 aa25.55■■□□□ 1.68
NTF3-202ENST00000423158 AQRO60306 1485 aaKnown RBP eCLIP25.42■■□□□ 1.66
NTF3-202ENST00000423158 TARBP1Q13395 1621 aaKnown RBP25.41■■□□□ 1.66
NTF3-202ENST00000423158 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.66
NTF3-202ENST00000423158 CCDC88BA6NC98 1476 aa25.38■■□□□ 1.65
NTF3-202ENST00000423158 ABCC8Q09428 1581 aa25.37■■□□□ 1.65
NTF3-202ENST00000423158 AEBP2Q6ZN18 517 aaPredicted RBP25.34■■□□□ 1.65
NTF3-202ENST00000423158 FBLN2P98095 1184 aa25.33■■□□□ 1.64
NTF3-202ENST00000423158 POLA1P09884 1462 aaPredicted RBP25.24■■□□□ 1.63
NTF3-202ENST00000423158 CLASP1Q7Z460 1538 aa25.24■■□□□ 1.63
NTF3-202ENST00000423158 RAD54L2Q9Y4B4 1467 aa25.17■■□□□ 1.62
NTF3-202ENST00000423158 SNAPC4Q5SXM2 1469 aa25.14■■□□□ 1.62
NTF3-202ENST00000423158 TDRD9Q8NDG6 1382 aaKnown RBP25.14■■□□□ 1.61
NTF3-202ENST00000423158 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
NTF3-202ENST00000423158 SOGA1O94964 1423 aa25.06■■□□□ 1.6
NTF3-202ENST00000423158 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
NTF3-202ENST00000423158 MAGI1Q96QZ7 1491 aaPredicted RBP25.03■■□□□ 1.6
NTF3-202ENST00000423158 CHMP7Q8WUX9 453 aaPredicted RBP25.02■■□□□ 1.6
NTF3-202ENST00000423158 GAPVD1Q14C86 1478 aa24.98■■□□□ 1.59
NTF3-202ENST00000423158 FGD5Q6ZNL6 1462 aa24.98■■□□□ 1.59
NTF3-202ENST00000423158 SYNJ2O15056 1496 aa24.95■■□□□ 1.59
NTF3-202ENST00000423158 GRIN2BQ13224 1484 aa24.95■■□□□ 1.58
NTF3-202ENST00000423158 CUX1P39880 1505 aa24.87■■□□□ 1.57
NTF3-202ENST00000423158 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
NTF3-202ENST00000423158 ERCC6L2Q5T890 1561 aa24.82■■□□□ 1.56
NTF3-202ENST00000423158 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
NTF3-202ENST00000423158 KIF13AQ9H1H9 1805 aa24.71■■□□□ 1.55
NTF3-202ENST00000423158 CEP170Q5SW79 1584 aa24.68■■□□□ 1.54
NTF3-202ENST00000423158 GRIN2AQ12879 1464 aa24.65■■□□□ 1.54
NTF3-202ENST00000423158 ABCA10Q8WWZ4 1543 aa24.65■■□□□ 1.54
NTF3-202ENST00000423158 NUP160Q12769 1436 aa24.61■■□□□ 1.53
NTF3-202ENST00000423158 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
NTF3-202ENST00000423158 ADAMTS12P58397 1594 aa24.58■■□□□ 1.52
NTF3-202ENST00000423158 FHAD1B1AJZ9 1412 aa24.42■■□□□ 1.5
NTF3-202ENST00000423158 ABCC10Q5T3U5 1492 aa24.41■■□□□ 1.5
NTF3-202ENST00000423158 KDM4FA0A1W2PPD8 638 aa24.39■■□□□ 1.5
NTF3-202ENST00000423158 PRG4Q92954 1404 aaPredicted RBP24.39■■□□□ 1.5
NTF3-202ENST00000423158 ILDR1Q86SU0 546 aaPredicted RBP24.38■■□□□ 1.49
NTF3-202ENST00000423158 FAM69CQ0P6D2 419 aa24.37■■□□□ 1.49
NTF3-202ENST00000423158 DIP2BQ9P265 1576 aa24.37■■□□□ 1.49
NTF3-202ENST00000423158 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 307.2 ms