RNA–Protein interactions for RNA: ENST00000352241.8

MITF-204, Transcript of melanogenesis associated transcription factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MITF, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MITF-204ENST00000352241 NISCHQ9Y2I1 1504 aa31.11■■■□□ 2.57
MITF-204ENST00000352241 DCAF8L2P0C7V8 631 aa29.99■■■□□ 2.39
MITF-204ENST00000352241 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
MITF-204ENST00000352241 SUPT5HO00267 1087 aaKnown RBP27.85■■■□□ 2.05
MITF-204ENST00000352241 ABCC9O60706 1549 aa26.91■■□□□ 1.9
MITF-204ENST00000352241 EHMT2Q96KQ7 1210 aa26.31■■□□□ 1.8
MITF-204ENST00000352241 CCDC180Q9P1Z9 1646 aa26.22■■□□□ 1.79
MITF-204ENST00000352241 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
MITF-204ENST00000352241 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
MITF-204ENST00000352241 TRIM41Q8WV44 630 aa26.03■■□□□ 1.76
MITF-204ENST00000352241 APLP2Q06481 763 aa25.91■■□□□ 1.74
MITF-204ENST00000352241 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
MITF-204ENST00000352241 RANGAP1P46060 587 aaPredicted RBP25.58■■□□□ 1.68
MITF-204ENST00000352241 UBTFP17480 764 aaKnown RBP25.54■■□□□ 1.68
MITF-204ENST00000352241 SCRIBQ14160 1630 aa25.49■■□□□ 1.67
MITF-204ENST00000352241 RB1CC1Q8TDY2 1594 aa25.48■■□□□ 1.67
MITF-204ENST00000352241 PCGF6Q9BYE7 350 aa25.46■■□□□ 1.67
MITF-204ENST00000352241 ATP1B4Q9UN42 357 aaPredicted RBP25.36■■□□□ 1.65
MITF-204ENST00000352241 NACADO15069 1562 aa25.32■■□□□ 1.64
MITF-204ENST00000352241 TTBK1Q5TCY1 1321 aaPredicted RBP25.24■■□□□ 1.63
MITF-204ENST00000352241 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.61
MITF-204ENST00000352241 DCAF1Q9Y4B6 1507 aa24.97■■□□□ 1.59
MITF-204ENST00000352241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.83■■□□□ 1.56
MITF-204ENST00000352241 HNRNPUL2Q1KMD3 747 aaKnown RBP24.83■■□□□ 1.56
MITF-204ENST00000352241 ZEB1P37275 1124 aaPredicted RBP24.81■■□□□ 1.56
MITF-204ENST00000352241 LOC105371045A0A1W2PR82 267 aa24.79■■□□□ 1.56
MITF-204ENST00000352241 TRIM26Q12899 539 aaPredicted RBP24.67■■□□□ 1.54
MITF-204ENST00000352241 FBLN2P98095 1184 aa24.65■■□□□ 1.54
MITF-204ENST00000352241 HRCP23327 699 aa24.62■■□□□ 1.53
MITF-204ENST00000352241 CCER1Q8TC90 406 aaPredicted RBP24.59■■□□□ 1.53
MITF-204ENST00000352241 PPARGC1BQ86YN6 1023 aaKnown RBP24.55■■□□□ 1.52
MITF-204ENST00000352241 MYO15BQ96JP2 1530 aa24.54■■□□□ 1.52
MITF-204ENST00000352241 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
MITF-204ENST00000352241 MYT1LQ9UL68 1186 aa24.49■■□□□ 1.51
MITF-204ENST00000352241 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
MITF-204ENST00000352241 BAZ1AQ9NRL2 1556 aaPredicted RBP24.43■■□□□ 1.5
MITF-204ENST00000352241 CSRNP3Q8WYN3 585 aa24.39■■□□□ 1.5
MITF-204ENST00000352241 ITGAEP38570 1179 aa24.32■■□□□ 1.48
MITF-204ENST00000352241 CECR2Q9BXF3 1484 aa24.3■■□□□ 1.48
MITF-204ENST00000352241 CENPBP07199 599 aaPredicted RBP24.15■■□□□ 1.46
MITF-204ENST00000352241 P3H3Q8IVL6 736 aa24.1■■□□□ 1.45
MITF-204ENST00000352241 PELP1Q8IZL8 1130 aaKnown RBP24.09■■□□□ 1.45
MITF-204ENST00000352241 ERCC6Q03468 1493 aa24.05■■□□□ 1.44
MITF-204ENST00000352241 SMARCA2P51531 1590 aa24.05■■□□□ 1.44
MITF-204ENST00000352241 FAM50AQ14320 339 aaKnown RBP24.01■■□□□ 1.43
MITF-204ENST00000352241 CHMP7Q8WUX9 453 aaPredicted RBP24■■□□□ 1.43
MITF-204ENST00000352241 MROH2BQ7Z745 1585 aa24■■□□□ 1.43
MITF-204ENST00000352241 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.43
MITF-204ENST00000352241 CDK11AQ9UQ88 783 aaPredicted RBP23.93■■□□□ 1.42
MITF-204ENST00000352241 ARID3CA6NKF2 412 aa23.92■■□□□ 1.42
MITF-204ENST00000352241 NPM1P06748 294 aaKnown RBP eCLIP23.87■■□□□ 1.41
MITF-204ENST00000352241 PDS5BQ9NTI5 1447 aa23.78■■□□□ 1.4
MITF-204ENST00000352241 EEA1Q15075 1411 aa23.77■■□□□ 1.4
MITF-204ENST00000352241 KIF27Q86VH2 1401 aa23.75■■□□□ 1.39
MITF-204ENST00000352241 ATAD2BQ9ULI0 1458 aa23.74■■□□□ 1.39
MITF-204ENST00000352241 CCDC88BA6NC98 1476 aa23.74■■□□□ 1.39
MITF-204ENST00000352241 TRIM52Q96A61 297 aa23.73■■□□□ 1.39
MITF-204ENST00000352241 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
MITF-204ENST00000352241 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
MITF-204ENST00000352241 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
MITF-204ENST00000352241 ZNF777Q9ULD5 760 aaPredicted RBP23.65■■□□□ 1.38
MITF-204ENST00000352241 WIZO95785 1651 aa23.63■■□□□ 1.37
MITF-204ENST00000352241 CADPSQ9ULU8 1353 aa23.62■■□□□ 1.37
MITF-204ENST00000352241 GOLGA3Q08378 1498 aa23.52■■□□□ 1.36
MITF-204ENST00000352241 CLIP1P30622 1438 aa23.5■■□□□ 1.35
MITF-204ENST00000352241 POLR3GLQ9BT43 218 aa23.49■■□□□ 1.35
MITF-204ENST00000352241 DIEXFQ68CQ4 756 aaKnown RBP23.49■■□□□ 1.35
MITF-204ENST00000352241 CUX2O14529 1486 aa23.49■■□□□ 1.35
MITF-204ENST00000352241 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
MITF-204ENST00000352241 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
MITF-204ENST00000352241 MTUS2Q5JR59 1369 aa23.42■■□□□ 1.34
MITF-204ENST00000352241 SOGA1O94964 1423 aa23.4■■□□□ 1.34
MITF-204ENST00000352241 CARMIL1Q5VZK9 1371 aa23.39■■□□□ 1.33
MITF-204ENST00000352241 NCAPD3P42695 1498 aa23.38■■□□□ 1.33
MITF-204ENST00000352241 ESF1Q9H501 851 aaKnown RBP23.37■■□□□ 1.33
MITF-204ENST00000352241 NEUROD1Q13562 356 aa23.36■■□□□ 1.33
MITF-204ENST00000352241 PLEKHD1A6NEE1 506 aa23.35■■□□□ 1.33
MITF-204ENST00000352241 TDRD9Q8NDG6 1382 aaKnown RBP23.31■■□□□ 1.32
MITF-204ENST00000352241 ABCC8Q09428 1581 aa23.3■■□□□ 1.32
MITF-204ENST00000352241 NEFLP07196 543 aa23.29■■□□□ 1.32
MITF-204ENST00000352241 TNIKQ9UKE5 1360 aa23.29■■□□□ 1.32
MITF-204ENST00000352241 KCNH8Q96L42 1107 aa23.28■■□□□ 1.32
MITF-204ENST00000352241 CEP162Q5TB80 1403 aa23.28■■□□□ 1.32
MITF-204ENST00000352241 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
MITF-204ENST00000352241 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
MITF-204ENST00000352241 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
MITF-204ENST00000352241 SLC4A1APQ9BWU0 796 aaKnown RBP23.23■■□□□ 1.31
MITF-204ENST00000352241 ZNF326Q5BKZ1 582 aaKnown RBP23.22■■□□□ 1.31
MITF-204ENST00000352241 CHIC2Q9UKJ5 165 aa23.15■■□□□ 1.3
MITF-204ENST00000352241 BCANQ96GW7 911 aa23.15■■□□□ 1.3
MITF-204ENST00000352241 ZNF316A6NFI3 1004 aaPredicted RBP23.14■■□□□ 1.29
MITF-204ENST00000352241 CC2D2AQ9P2K1 1620 aa23.11■■□□□ 1.29
MITF-204ENST00000352241 CNGB1Q14028 1251 aaPredicted RBP23.1■■□□□ 1.29
MITF-204ENST00000352241 CARMIL2Q6F5E8 1435 aa23.08■■□□□ 1.28
MITF-204ENST00000352241 FHAD1B1AJZ9 1412 aa23.06■■□□□ 1.28
MITF-204ENST00000352241 STAG3Q9UJ98 1225 aa23.06■■□□□ 1.28
MITF-204ENST00000352241 BICRAQ9NZM4 1560 aa23.05■■□□□ 1.28
MITF-204ENST00000352241 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.04■■□□□ 1.28
MITF-204ENST00000352241 CFDP1Q9UEE9 299 aaPredicted RBP23.04■■□□□ 1.28
MITF-204ENST00000352241 CHGAP10645 457 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms