RNA–Protein interactions for RNA: ENST00000611875.4

NPRL3-211, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPRL3, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-211ENST00000611875 NISCHQ9Y2I1 1504 aa34.85■■■■□ 3.17
NPRL3-211ENST00000611875 CCDC180Q9P1Z9 1646 aa29.82■■■□□ 2.36
NPRL3-211ENST00000611875 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
NPRL3-211ENST00000611875 SHROOM4Q9ULL8 1493 aa29.38■■■□□ 2.29
NPRL3-211ENST00000611875 ZCCHC6Q5VYS8 1495 aaKnown RBP29.28■■■□□ 2.28
NPRL3-211ENST00000611875 ABCC9O60706 1549 aa28.65■■■□□ 2.18
NPRL3-211ENST00000611875 DCAF1Q9Y4B6 1507 aa28.47■■■□□ 2.15
NPRL3-211ENST00000611875 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.14
NPRL3-211ENST00000611875 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
NPRL3-211ENST00000611875 MYO15BQ96JP2 1530 aa27.93■■■□□ 2.06
NPRL3-211ENST00000611875 NACADO15069 1562 aa27.86■■■□□ 2.05
NPRL3-211ENST00000611875 RB1CC1Q8TDY2 1594 aa27.61■■■□□ 2.01
NPRL3-211ENST00000611875 HRCP23327 699 aa27.58■■■□□ 2
NPRL3-211ENST00000611875 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.97
NPRL3-211ENST00000611875 CECR2Q9BXF3 1484 aa27.36■■□□□ 1.97
NPRL3-211ENST00000611875 RSF1Q96T23 1441 aaPredicted RBP27.34■■□□□ 1.97
NPRL3-211ENST00000611875 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
NPRL3-211ENST00000611875 MROH2BQ7Z745 1585 aa27.12■■□□□ 1.93
NPRL3-211ENST00000611875 UNC13AQ9UPW8 1703 aa27.1■■□□□ 1.93
NPRL3-211ENST00000611875 PELP1Q8IZL8 1130 aaKnown RBP26.95■■□□□ 1.9
NPRL3-211ENST00000611875 BICRAQ9NZM4 1560 aa26.93■■□□□ 1.9
NPRL3-211ENST00000611875 PPARGC1BQ86YN6 1023 aaKnown RBP26.91■■□□□ 1.9
NPRL3-211ENST00000611875 WIZO95785 1651 aa26.88■■□□□ 1.89
NPRL3-211ENST00000611875 PCGF6Q9BYE7 350 aa26.87■■□□□ 1.89
NPRL3-211ENST00000611875 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
NPRL3-211ENST00000611875 SMARCA4P51532 1647 aa26.66■■□□□ 1.86
NPRL3-211ENST00000611875 TRIM41Q8WV44 630 aa26.48■■□□□ 1.83
NPRL3-211ENST00000611875 LOC105371045A0A1W2PR82 267 aa26.45■■□□□ 1.82
NPRL3-211ENST00000611875 TOP2AP11388 1531 aaKnown RBP26.38■■□□□ 1.81
NPRL3-211ENST00000611875 CCDC88BA6NC98 1476 aa26.37■■□□□ 1.81
NPRL3-211ENST00000611875 FAM9AQ8IZU1 332 aaPredicted RBP26.36■■□□□ 1.81
NPRL3-211ENST00000611875 ATAD2BQ9ULI0 1458 aa26.27■■□□□ 1.8
NPRL3-211ENST00000611875 EHMT2Q96KQ7 1210 aa26.26■■□□□ 1.79
NPRL3-211ENST00000611875 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
NPRL3-211ENST00000611875 SCAF1Q9H7N4 1312 aaKnown RBP26.16■■□□□ 1.78
NPRL3-211ENST00000611875 BAZ1BQ9UIG0 1483 aaKnown RBP26.14■■□□□ 1.78
NPRL3-211ENST00000611875 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
NPRL3-211ENST00000611875 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
NPRL3-211ENST00000611875 ABCC8Q09428 1581 aa26.05■■□□□ 1.76
NPRL3-211ENST00000611875 TRIM26Q12899 539 aaPredicted RBP26.01■■□□□ 1.75
NPRL3-211ENST00000611875 MYT1Q01538 1121 aa25.98■■□□□ 1.75
NPRL3-211ENST00000611875 ZEB1P37275 1124 aaPredicted RBP25.9■■□□□ 1.74
NPRL3-211ENST00000611875 NCAPD3P42695 1498 aa25.87■■□□□ 1.73
NPRL3-211ENST00000611875 SOGA1O94964 1423 aa25.7■■□□□ 1.71
NPRL3-211ENST00000611875 HMGXB3Q12766 1538 aa25.7■■□□□ 1.7
NPRL3-211ENST00000611875 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
NPRL3-211ENST00000611875 CC2D2AQ9P2K1 1620 aa25.67■■□□□ 1.7
NPRL3-211ENST00000611875 RUSC2Q8N2Y8 1516 aa25.64■■□□□ 1.69
NPRL3-211ENST00000611875 DNAJC5BQ9UF47 199 aa25.59■■□□□ 1.69
NPRL3-211ENST00000611875 SYNJ1O43426 1573 aa25.55■■□□□ 1.68
NPRL3-211ENST00000611875 ACIN1Q9UKV3 1341 aaKnown RBP25.49■■□□□ 1.67
NPRL3-211ENST00000611875 CSRNP3Q8WYN3 585 aa25.48■■□□□ 1.67
NPRL3-211ENST00000611875 CFTRP13569 1480 aa25.44■■□□□ 1.66
NPRL3-211ENST00000611875 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
NPRL3-211ENST00000611875 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
NPRL3-211ENST00000611875 NEUROD1Q13562 356 aa25.38■■□□□ 1.65
NPRL3-211ENST00000611875 NESP48681 1621 aa25.28■■□□□ 1.64
NPRL3-211ENST00000611875 CUX1P39880 1505 aa25.27■■□□□ 1.64
NPRL3-211ENST00000611875 GTF3C3Q9Y5Q9 886 aa25.27■■□□□ 1.64
NPRL3-211ENST00000611875 RANGAP1P46060 587 aaPredicted RBP25.25■■□□□ 1.63
NPRL3-211ENST00000611875 TOP2BQ02880 1626 aa25.24■■□□□ 1.63
NPRL3-211ENST00000611875 EEA1Q15075 1411 aa25.22■■□□□ 1.63
NPRL3-211ENST00000611875 CENPBP07199 599 aaPredicted RBP25.17■■□□□ 1.62
NPRL3-211ENST00000611875 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.62
NPRL3-211ENST00000611875 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
NPRL3-211ENST00000611875 FANCD2Q9BXW9 1451 aa25.11■■□□□ 1.61
NPRL3-211ENST00000611875 BIVM-ERCC5R4GMW8 1640 aa25.1■■□□□ 1.61
NPRL3-211ENST00000611875 TNIKQ9UKE5 1360 aa25.1■■□□□ 1.61
NPRL3-211ENST00000611875 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
NPRL3-211ENST00000611875 RAPGEF2Q9Y4G8 1499 aa25.07■■□□□ 1.6
NPRL3-211ENST00000611875 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
NPRL3-211ENST00000611875 FGD5Q6ZNL6 1462 aa24.96■■□□□ 1.59
NPRL3-211ENST00000611875 KIF27Q86VH2 1401 aa24.95■■□□□ 1.59
NPRL3-211ENST00000611875 DIEXFQ68CQ4 756 aaKnown RBP24.94■■□□□ 1.58
NPRL3-211ENST00000611875 CUX2O14529 1486 aa24.94■■□□□ 1.58
NPRL3-211ENST00000611875 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
NPRL3-211ENST00000611875 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
NPRL3-211ENST00000611875 KIF21BO75037 1637 aa24.88■■□□□ 1.57
NPRL3-211ENST00000611875 PRXQ9BXM0 1461 aa24.84■■□□□ 1.57
NPRL3-211ENST00000611875 IGF1RP08069 1367 aa24.84■■□□□ 1.57
NPRL3-211ENST00000611875 CLIP1P30622 1438 aa24.84■■□□□ 1.57
NPRL3-211ENST00000611875 TOPBP1Q92547 1522 aa24.83■■□□□ 1.56
NPRL3-211ENST00000611875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.83■■□□□ 1.56
NPRL3-211ENST00000611875 CCER1Q8TC90 406 aaPredicted RBP24.82■■□□□ 1.56
NPRL3-211ENST00000611875 LAMC3Q9Y6N6 1575 aa24.81■■□□□ 1.56
NPRL3-211ENST00000611875 PDS5BQ9NTI5 1447 aa24.79■■□□□ 1.56
NPRL3-211ENST00000611875 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
NPRL3-211ENST00000611875 POLA1P09884 1462 aaPredicted RBP24.78■■□□□ 1.56
NPRL3-211ENST00000611875 DNMBPQ6XZF7 1577 aa24.74■■□□□ 1.55
NPRL3-211ENST00000611875 CARMIL1Q5VZK9 1371 aa24.71■■□□□ 1.55
NPRL3-211ENST00000611875 TDRD9Q8NDG6 1382 aaKnown RBP24.71■■□□□ 1.55
NPRL3-211ENST00000611875 KIF21AQ7Z4S6 1674 aa24.66■■□□□ 1.54
NPRL3-211ENST00000611875 ERICH3Q5RHP9 1530 aa24.64■■□□□ 1.54
NPRL3-211ENST00000611875 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
NPRL3-211ENST00000611875 P3H3Q8IVL6 736 aa24.58■■□□□ 1.53
NPRL3-211ENST00000611875 VPS8Q8N3P4 1428 aa24.56■■□□□ 1.52
NPRL3-211ENST00000611875 APLP2Q06481 763 aa24.55■■□□□ 1.52
NPRL3-211ENST00000611875 ARAP1Q96P48 1450 aa24.52■■□□□ 1.51
NPRL3-211ENST00000611875 YTHDC1Q96MU7 727 aaKnown RBP24.51■■□□□ 1.51
NPRL3-211ENST00000611875 ARHGAP35Q9NRY4 1499 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms