RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 NISCHQ9Y2I1 1504 aa35.14■■■■□ 3.22
CHRNA7-217ENST00000636603 CCDC180Q9P1Z9 1646 aa30.68■■■□□ 2.5
CHRNA7-217ENST00000636603 ABCC9O60706 1549 aa29.46■■■□□ 2.31
CHRNA7-217ENST00000636603 ZCCHC6Q5VYS8 1495 aaKnown RBP29.44■■■□□ 2.3
CHRNA7-217ENST00000636603 DCAF8L2P0C7V8 631 aa29.32■■■□□ 2.28
CHRNA7-217ENST00000636603 DCAF1Q9Y4B6 1507 aa28.95■■■□□ 2.22
CHRNA7-217ENST00000636603 MYO15BQ96JP2 1530 aa28.68■■■□□ 2.18
CHRNA7-217ENST00000636603 SHROOM4Q9ULL8 1493 aa28.68■■■□□ 2.18
CHRNA7-217ENST00000636603 NACADO15069 1562 aa28.67■■■□□ 2.18
CHRNA7-217ENST00000636603 RB1CC1Q8TDY2 1594 aa28.51■■■□□ 2.15
CHRNA7-217ENST00000636603 SCRIBQ14160 1630 aa28.34■■■□□ 2.13
CHRNA7-217ENST00000636603 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.07
CHRNA7-217ENST00000636603 PABPN1Q86U42 306 aaKnown RBP eCLIP27.8■■■□□ 2.04
CHRNA7-217ENST00000636603 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
CHRNA7-217ENST00000636603 SUPT5HO00267 1087 aaKnown RBP27.43■■□□□ 1.98
CHRNA7-217ENST00000636603 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
CHRNA7-217ENST00000636603 MROH2BQ7Z745 1585 aa27.2■■□□□ 1.95
CHRNA7-217ENST00000636603 RSF1Q96T23 1441 aaPredicted RBP27.2■■□□□ 1.94
CHRNA7-217ENST00000636603 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
CHRNA7-217ENST00000636603 SMARCA4P51532 1647 aa27.07■■□□□ 1.92
CHRNA7-217ENST00000636603 WIZO95785 1651 aa26.98■■□□□ 1.91
CHRNA7-217ENST00000636603 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
CHRNA7-217ENST00000636603 ATAD2BQ9ULI0 1458 aa26.72■■□□□ 1.87
CHRNA7-217ENST00000636603 PEG3Q9GZU2 1588 aa26.69■■□□□ 1.86
CHRNA7-217ENST00000636603 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
CHRNA7-217ENST00000636603 DNAJC5BQ9UF47 199 aa26.66■■□□□ 1.86
CHRNA7-217ENST00000636603 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
CHRNA7-217ENST00000636603 TOP2AP11388 1531 aaKnown RBP26.6■■□□□ 1.85
CHRNA7-217ENST00000636603 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
CHRNA7-217ENST00000636603 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
CHRNA7-217ENST00000636603 HMGXB3Q12766 1538 aa26.39■■□□□ 1.82
CHRNA7-217ENST00000636603 CCDC88BA6NC98 1476 aa26.39■■□□□ 1.82
CHRNA7-217ENST00000636603 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
CHRNA7-217ENST00000636603 CFTRP13569 1480 aa25.85■■□□□ 1.73
CHRNA7-217ENST00000636603 CADPSQ9ULU8 1353 aa25.83■■□□□ 1.73
CHRNA7-217ENST00000636603 ABCC8Q09428 1581 aa25.8■■□□□ 1.72
CHRNA7-217ENST00000636603 NESP48681 1621 aa25.8■■□□□ 1.72
CHRNA7-217ENST00000636603 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
CHRNA7-217ENST00000636603 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
CHRNA7-217ENST00000636603 LAMC3Q9Y6N6 1575 aa25.62■■□□□ 1.69
CHRNA7-217ENST00000636603 WRNQ14191 1432 aaPredicted RBP eCLIP25.59■■□□□ 1.69
CHRNA7-217ENST00000636603 FANCD2Q9BXW9 1451 aa25.56■■□□□ 1.68
CHRNA7-217ENST00000636603 SYNJ1O43426 1573 aa25.53■■□□□ 1.68
CHRNA7-217ENST00000636603 PDS5BQ9NTI5 1447 aa25.45■■□□□ 1.67
CHRNA7-217ENST00000636603 CUX1P39880 1505 aa25.44■■□□□ 1.66
CHRNA7-217ENST00000636603 KIF21AQ7Z4S6 1674 aa25.42■■□□□ 1.66
CHRNA7-217ENST00000636603 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
CHRNA7-217ENST00000636603 TOP2BQ02880 1626 aa25.38■■□□□ 1.65
CHRNA7-217ENST00000636603 FAM9AQ8IZU1 332 aaPredicted RBP25.37■■□□□ 1.65
CHRNA7-217ENST00000636603 ERCC6Q03468 1493 aa25.36■■□□□ 1.65
CHRNA7-217ENST00000636603 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
CHRNA7-217ENST00000636603 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
CHRNA7-217ENST00000636603 SOGA1O94964 1423 aa25.26■■□□□ 1.63
CHRNA7-217ENST00000636603 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
CHRNA7-217ENST00000636603 DNMBPQ6XZF7 1577 aa25.24■■□□□ 1.63
CHRNA7-217ENST00000636603 RUSC2Q8N2Y8 1516 aa25.22■■□□□ 1.63
CHRNA7-217ENST00000636603 FGD5Q6ZNL6 1462 aa25.2■■□□□ 1.62
CHRNA7-217ENST00000636603 THOC2Q8NI27 1593 aaKnown RBP25.17■■□□□ 1.62
CHRNA7-217ENST00000636603 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
CHRNA7-217ENST00000636603 LOC105371045A0A1W2PR82 267 aa25.14■■□□□ 1.62
CHRNA7-217ENST00000636603 EHMT2Q96KQ7 1210 aa25.12■■□□□ 1.61
CHRNA7-217ENST00000636603 POLA1P09884 1462 aaPredicted RBP25.11■■□□□ 1.61
CHRNA7-217ENST00000636603 RAD54L2Q9Y4B4 1467 aa25.1■■□□□ 1.61
CHRNA7-217ENST00000636603 WDR62O43379 1518 aa25.04■■□□□ 1.6
CHRNA7-217ENST00000636603 CSRNP3Q8WYN3 585 aa25■■□□□ 1.59
CHRNA7-217ENST00000636603 CUX2O14529 1486 aa24.99■■□□□ 1.59
CHRNA7-217ENST00000636603 EEA1Q15075 1411 aa24.97■■□□□ 1.59
CHRNA7-217ENST00000636603 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
CHRNA7-217ENST00000636603 ABCA10Q8WWZ4 1543 aa24.92■■□□□ 1.58
CHRNA7-217ENST00000636603 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
CHRNA7-217ENST00000636603 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
CHRNA7-217ENST00000636603 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
CHRNA7-217ENST00000636603 IGF1RP08069 1367 aa24.81■■□□□ 1.56
CHRNA7-217ENST00000636603 IFT140Q96RY7 1462 aa24.79■■□□□ 1.56
CHRNA7-217ENST00000636603 ZNF608Q9ULD9 1512 aaPredicted RBP24.78■■□□□ 1.56
CHRNA7-217ENST00000636603 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.56
CHRNA7-217ENST00000636603 GAPVD1Q14C86 1478 aa24.74■■□□□ 1.55
CHRNA7-217ENST00000636603 ABCA5Q8WWZ7 1642 aa24.74■■□□□ 1.55
CHRNA7-217ENST00000636603 RAPGEF2Q9Y4G8 1499 aa24.73■■□□□ 1.55
CHRNA7-217ENST00000636603 PRXQ9BXM0 1461 aa24.71■■□□□ 1.55
CHRNA7-217ENST00000636603 UBTFP17480 764 aaKnown RBP24.71■■□□□ 1.55
CHRNA7-217ENST00000636603 KIF21BO75037 1637 aa24.71■■□□□ 1.55
CHRNA7-217ENST00000636603 GOLGA3Q08378 1498 aa24.69■■□□□ 1.54
CHRNA7-217ENST00000636603 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
CHRNA7-217ENST00000636603 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
CHRNA7-217ENST00000636603 PBRM1Q86U86 1689 aa24.61■■□□□ 1.53
CHRNA7-217ENST00000636603 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
CHRNA7-217ENST00000636603 HRCP23327 699 aa24.59■■□□□ 1.53
CHRNA7-217ENST00000636603 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
CHRNA7-217ENST00000636603 TNIKQ9UKE5 1360 aa24.56■■□□□ 1.52
CHRNA7-217ENST00000636603 PCGF6Q9BYE7 350 aa24.56■■□□□ 1.52
CHRNA7-217ENST00000636603 CUL7Q14999 1698 aa24.54■■□□□ 1.52
CHRNA7-217ENST00000636603 RANGAP1P46060 587 aaPredicted RBP24.52■■□□□ 1.52
CHRNA7-217ENST00000636603 SNAPC4Q5SXM2 1469 aa24.49■■□□□ 1.51
CHRNA7-217ENST00000636603 CEP162Q5TB80 1403 aa24.46■■□□□ 1.51
CHRNA7-217ENST00000636603 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
CHRNA7-217ENST00000636603 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
CHRNA7-217ENST00000636603 FBLN2P98095 1184 aa24.37■■□□□ 1.49
CHRNA7-217ENST00000636603 MAGI1Q96QZ7 1491 aaPredicted RBP24.36■■□□□ 1.49
CHRNA7-217ENST00000636603 CHMP7Q8WUX9 453 aaPredicted RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms