RNA–Protein interactions for RNA: ENST00000329138.8

HGS-201, Transcript of hepatocyte growth factor-regulated tyrosine kinase substrate, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HGS, Length 2,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HGS-201ENST00000329138 NISCHQ9Y2I1 1504 aa35.61■■■■□ 3.29
HGS-201ENST00000329138 SHROOM4Q9ULL8 1493 aa30.35■■■□□ 2.45
HGS-201ENST00000329138 CCDC180Q9P1Z9 1646 aa30.34■■■□□ 2.45
HGS-201ENST00000329138 ZCCHC6Q5VYS8 1495 aaKnown RBP30.13■■■□□ 2.41
HGS-201ENST00000329138 SUPT5HO00267 1087 aaKnown RBP29.7■■■□□ 2.35
HGS-201ENST00000329138 DCAF8L2P0C7V8 631 aa29.5■■■□□ 2.31
HGS-201ENST00000329138 DCAF1Q9Y4B6 1507 aa29.19■■■□□ 2.26
HGS-201ENST00000329138 CHIC1Q5VXU3 224 aa28.85■■■□□ 2.21
HGS-201ENST00000329138 MYO15BQ96JP2 1530 aa28.81■■■□□ 2.2
HGS-201ENST00000329138 SCRIBQ14160 1630 aa28.45■■■□□ 2.15
HGS-201ENST00000329138 ABCC9O60706 1549 aa28.45■■■□□ 2.14
HGS-201ENST00000329138 RSF1Q96T23 1441 aaPredicted RBP28.15■■■□□ 2.1
HGS-201ENST00000329138 NACADO15069 1562 aa28.01■■■□□ 2.07
HGS-201ENST00000329138 LOC105371045A0A1W2PR82 267 aa28.01■■■□□ 2.07
HGS-201ENST00000329138 RB1CC1Q8TDY2 1594 aa27.93■■■□□ 2.06
HGS-201ENST00000329138 PCGF6Q9BYE7 350 aa27.91■■■□□ 2.06
HGS-201ENST00000329138 HRCP23327 699 aa27.87■■■□□ 2.05
HGS-201ENST00000329138 CECR2Q9BXF3 1484 aa27.8■■■□□ 2.04
HGS-201ENST00000329138 MROH2BQ7Z745 1585 aa27.71■■■□□ 2.03
HGS-201ENST00000329138 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
HGS-201ENST00000329138 WIZO95785 1651 aa27.6■■■□□ 2.01
HGS-201ENST00000329138 FAM9AQ8IZU1 332 aaPredicted RBP27.45■■□□□ 1.99
HGS-201ENST00000329138 BAZ1AQ9NRL2 1556 aaPredicted RBP27.4■■□□□ 1.98
HGS-201ENST00000329138 TRIM26Q12899 539 aaPredicted RBP27.36■■□□□ 1.97
HGS-201ENST00000329138 PPARGC1BQ86YN6 1023 aaKnown RBP27.36■■□□□ 1.97
HGS-201ENST00000329138 UNC13AQ9UPW8 1703 aa27.31■■□□□ 1.96
HGS-201ENST00000329138 EHMT2Q96KQ7 1210 aa27.25■■□□□ 1.95
HGS-201ENST00000329138 EIF4G1Q04637 1599 aaKnown RBP27.21■■□□□ 1.95
HGS-201ENST00000329138 SMARCA4P51532 1647 aa27.17■■□□□ 1.94
HGS-201ENST00000329138 TOP2AP11388 1531 aaKnown RBP27.12■■□□□ 1.93
HGS-201ENST00000329138 SMARCA2P51531 1590 aa26.99■■□□□ 1.91
HGS-201ENST00000329138 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
HGS-201ENST00000329138 ABCC8Q09428 1581 aa26.96■■□□□ 1.91
HGS-201ENST00000329138 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
HGS-201ENST00000329138 PABPN1Q86U42 306 aaKnown RBP eCLIP26.86■■□□□ 1.894e-7■■■□□ 18.7
HGS-201ENST00000329138 ZEB1P37275 1124 aaPredicted RBP26.69■■□□□ 1.86
HGS-201ENST00000329138 SOGA1O94964 1423 aa26.65■■□□□ 1.86
HGS-201ENST00000329138 PEG3Q9GZU2 1588 aa26.62■■□□□ 1.85
HGS-201ENST00000329138 RUSC2Q8N2Y8 1516 aa26.55■■□□□ 1.84
HGS-201ENST00000329138 CEP162Q5TB80 1403 aa26.5■■□□□ 1.83
HGS-201ENST00000329138 EEA1Q15075 1411 aa26.45■■□□□ 1.82
HGS-201ENST00000329138 WRNQ14191 1432 aaPredicted RBP eCLIP26.44■■□□□ 1.82
HGS-201ENST00000329138 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
HGS-201ENST00000329138 CSRNP3Q8WYN3 585 aa26.43■■□□□ 1.82
HGS-201ENST00000329138 TNIKQ9UKE5 1360 aa26.42■■□□□ 1.82
HGS-201ENST00000329138 SYNJ1O43426 1573 aa26.38■■□□□ 1.81
HGS-201ENST00000329138 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
HGS-201ENST00000329138 TTBK1Q5TCY1 1321 aaPredicted RBP26.37■■□□□ 1.81
HGS-201ENST00000329138 UBTFP17480 764 aaKnown RBP26.34■■□□□ 1.81
HGS-201ENST00000329138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.33■■□□□ 1.81
HGS-201ENST00000329138 GOLGA3Q08378 1498 aa26.31■■□□□ 1.8
HGS-201ENST00000329138 CCER1Q8TC90 406 aaPredicted RBP26.22■■□□□ 1.79
HGS-201ENST00000329138 KIF21BO75037 1637 aa26.17■■□□□ 1.78
HGS-201ENST00000329138 CEP164Q9UPV0 1460 aa26.16■■□□□ 1.78
HGS-201ENST00000329138 TOP2BQ02880 1626 aa26.04■■□□□ 1.76
HGS-201ENST00000329138 RAPGEF2Q9Y4G8 1499 aa26.01■■□□□ 1.75
HGS-201ENST00000329138 CLIP1P30622 1438 aa26■■□□□ 1.75
HGS-201ENST00000329138 BIVM-ERCC5R4GMW8 1640 aa25.97■■□□□ 1.75
HGS-201ENST00000329138 HMGXB3Q12766 1538 aa25.93■■□□□ 1.74
HGS-201ENST00000329138 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
HGS-201ENST00000329138 VPS8Q8N3P4 1428 aa25.89■■□□□ 1.73
HGS-201ENST00000329138 RANGAP1P46060 587 aaPredicted RBP25.88■■□□□ 1.73
HGS-201ENST00000329138 CUX1P39880 1505 aa25.8■■□□□ 1.72
HGS-201ENST00000329138 HNRNPUL2Q1KMD3 747 aaKnown RBP25.75■■□□□ 1.71
HGS-201ENST00000329138 PRXQ9BXM0 1461 aa25.74■■□□□ 1.71
HGS-201ENST00000329138 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
HGS-201ENST00000329138 APLP2Q06481 763 aa25.71■■□□□ 1.71
HGS-201ENST00000329138 CFTRP13569 1480 aa25.7■■□□□ 1.71
HGS-201ENST00000329138 DIEXFQ68CQ4 756 aaKnown RBP25.68■■□□□ 1.7
HGS-201ENST00000329138 SCAF1Q9H7N4 1312 aaKnown RBP25.67■■□□□ 1.7
HGS-201ENST00000329138 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
HGS-201ENST00000329138 PRDM2Q13029 1718 aa25.61■■□□□ 1.69
HGS-201ENST00000329138 KIF27Q86VH2 1401 aa25.61■■□□□ 1.69
HGS-201ENST00000329138 ZNF316A6NFI3 1004 aaPredicted RBP25.49■■□□□ 1.67
HGS-201ENST00000329138 KANK4Q5T7N3 995 aaPredicted RBP25.46■■□□□ 1.67
HGS-201ENST00000329138 NEUROD1Q13562 356 aa25.42■■□□□ 1.66
HGS-201ENST00000329138 ACIN1Q9UKV3 1341 aaKnown RBP25.42■■□□□ 1.66
HGS-201ENST00000329138 CUX2O14529 1486 aa25.41■■□□□ 1.66
HGS-201ENST00000329138 ARHGAP35Q9NRY4 1499 aa25.41■■□□□ 1.66
HGS-201ENST00000329138 CADPSQ9ULU8 1353 aa25.4■■□□□ 1.66
HGS-201ENST00000329138 CC2D2AQ9P2K1 1620 aa25.35■■□□□ 1.65
HGS-201ENST00000329138 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
HGS-201ENST00000329138 IGF1RP08069 1367 aa25.34■■□□□ 1.65
HGS-201ENST00000329138 RRBP1Q9P2E9 1410 aaKnown RBP25.27■■□□□ 1.64
HGS-201ENST00000329138 CENPBP07199 599 aaPredicted RBP25.26■■□□□ 1.63
HGS-201ENST00000329138 DHX57Q6P158 1386 aaKnown RBP25.25■■□□□ 1.63
HGS-201ENST00000329138 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
HGS-201ENST00000329138 FANCD2Q9BXW9 1451 aa25.2■■□□□ 1.62
HGS-201ENST00000329138 CCNB3Q8WWL7 1395 aa25.17■■□□□ 1.62
HGS-201ENST00000329138 MIER1Q8N108 512 aa25.15■■□□□ 1.62
HGS-201ENST00000329138 CLSPNQ9HAW4 1339 aa25.14■■□□□ 1.62
HGS-201ENST00000329138 GTF3C3Q9Y5Q9 886 aa25.14■■□□□ 1.62
HGS-201ENST00000329138 TIAM1Q13009 1591 aa25.14■■□□□ 1.61
HGS-201ENST00000329138 YTHDC1Q96MU7 727 aaKnown RBP25.11■■□□□ 1.61
HGS-201ENST00000329138 ITGAEP38570 1179 aa25.1■■□□□ 1.61
HGS-201ENST00000329138 RAD54L2Q9Y4B4 1467 aa25.09■■□□□ 1.61
HGS-201ENST00000329138 DNMBPQ6XZF7 1577 aa25.09■■□□□ 1.61
HGS-201ENST00000329138 NESP48681 1621 aa25.08■■□□□ 1.61
HGS-201ENST00000329138 MAP3K1Q13233 1512 aa25.05■■□□□ 1.6
HGS-201ENST00000329138 TOPBP1Q92547 1522 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms