RNA–Protein interactions for RNA: ENST00000367054.6

SOD2-202, Transcript of superoxide dismutase 2, humanhuman

TSL 2 BASIC

Gene SOD2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-202ENST00000367054 NISCHQ9Y2I1 1504 aa34.86■■■■□ 3.17
SOD2-202ENST00000367054 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.59
SOD2-202ENST00000367054 ABCC9O60706 1549 aa30.83■■■□□ 2.53
SOD2-202ENST00000367054 RB1CC1Q8TDY2 1594 aa29.49■■■□□ 2.31
SOD2-202ENST00000367054 NACADO15069 1562 aa29.36■■■□□ 2.29
SOD2-202ENST00000367054 DCAF8L2P0C7V8 631 aa29.18■■■□□ 2.26
SOD2-202ENST00000367054 MYO15BQ96JP2 1530 aa29.06■■■□□ 2.24
SOD2-202ENST00000367054 ZCCHC6Q5VYS8 1495 aaKnown RBP28.98■■■□□ 2.23
SOD2-202ENST00000367054 UNC13AQ9UPW8 1703 aa28.97■■■□□ 2.23
SOD2-202ENST00000367054 DCAF1Q9Y4B6 1507 aa28.81■■■□□ 2.2
SOD2-202ENST00000367054 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
SOD2-202ENST00000367054 BICRAQ9NZM4 1560 aa28.67■■■□□ 2.18
SOD2-202ENST00000367054 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
SOD2-202ENST00000367054 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
SOD2-202ENST00000367054 SHROOM4Q9ULL8 1493 aa28.26■■■□□ 2.11
SOD2-202ENST00000367054 EIF4G1Q04637 1599 aaKnown RBP27.92■■■□□ 2.06
SOD2-202ENST00000367054 CC2D2AQ9P2K1 1620 aa27.91■■■□□ 2.06
SOD2-202ENST00000367054 CECR2Q9BXF3 1484 aa27.72■■■□□ 2.03
SOD2-202ENST00000367054 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
SOD2-202ENST00000367054 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
SOD2-202ENST00000367054 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
SOD2-202ENST00000367054 BAZ1AQ9NRL2 1556 aaPredicted RBP27.04■■□□□ 1.92
SOD2-202ENST00000367054 SMARCA2P51531 1590 aa27.01■■□□□ 1.92
SOD2-202ENST00000367054 HMGXB3Q12766 1538 aa26.95■■□□□ 1.91
SOD2-202ENST00000367054 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
SOD2-202ENST00000367054 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
SOD2-202ENST00000367054 BAZ1BQ9UIG0 1483 aaKnown RBP26.82■■□□□ 1.88
SOD2-202ENST00000367054 WIZO95785 1651 aa26.61■■□□□ 1.85
SOD2-202ENST00000367054 NESP48681 1621 aa26.6■■□□□ 1.85
SOD2-202ENST00000367054 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
SOD2-202ENST00000367054 LAMC3Q9Y6N6 1575 aa26.46■■□□□ 1.83
SOD2-202ENST00000367054 CUX2O14529 1486 aa26.42■■□□□ 1.82
SOD2-202ENST00000367054 RSF1Q96T23 1441 aaPredicted RBP26.4■■□□□ 1.82
SOD2-202ENST00000367054 KIF21AQ7Z4S6 1674 aa26.34■■□□□ 1.81
SOD2-202ENST00000367054 THOC2Q8NI27 1593 aaKnown RBP26.32■■□□□ 1.8
SOD2-202ENST00000367054 TOP2AP11388 1531 aaKnown RBP26.26■■□□□ 1.79
SOD2-202ENST00000367054 CADPSQ9ULU8 1353 aa26.25■■□□□ 1.79
SOD2-202ENST00000367054 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
SOD2-202ENST00000367054 CFTRP13569 1480 aa26.05■■□□□ 1.76
SOD2-202ENST00000367054 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
SOD2-202ENST00000367054 DNAJC5Q9H3Z4 198 aa26■■□□□ 1.75
SOD2-202ENST00000367054 CEP164Q9UPV0 1460 aa25.99■■□□□ 1.75
SOD2-202ENST00000367054 WDR62O43379 1518 aa25.98■■□□□ 1.75
SOD2-202ENST00000367054 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
SOD2-202ENST00000367054 PRDM2Q13029 1718 aa25.96■■□□□ 1.75
SOD2-202ENST00000367054 CCDC88BA6NC98 1476 aa25.93■■□□□ 1.74
SOD2-202ENST00000367054 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
SOD2-202ENST00000367054 TOPBP1Q92547 1522 aa25.55■■□□□ 1.68
SOD2-202ENST00000367054 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
SOD2-202ENST00000367054 ABCC8Q09428 1581 aa25.47■■□□□ 1.67
SOD2-202ENST00000367054 IFT140Q96RY7 1462 aa25.44■■□□□ 1.66
SOD2-202ENST00000367054 SUPT5HO00267 1087 aaKnown RBP25.42■■□□□ 1.66
SOD2-202ENST00000367054 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
SOD2-202ENST00000367054 TARBP1Q13395 1621 aaKnown RBP25.34■■□□□ 1.65
SOD2-202ENST00000367054 EIF4G3O43432 1585 aaKnown RBP25.32■■□□□ 1.64
SOD2-202ENST00000367054 POLA1P09884 1462 aaPredicted RBP25.31■■□□□ 1.64
SOD2-202ENST00000367054 CUX1P39880 1505 aa25.25■■□□□ 1.63
SOD2-202ENST00000367054 OSCARQ8IYS5 282 aa25.2■■□□□ 1.62
SOD2-202ENST00000367054 FGD5Q6ZNL6 1462 aa25.2■■□□□ 1.62
SOD2-202ENST00000367054 RAD54L2Q9Y4B4 1467 aa25.2■■□□□ 1.62
SOD2-202ENST00000367054 AQRO60306 1485 aaKnown RBP eCLIP25.18■■□□□ 1.621e-6■■■■■ 33.2
SOD2-202ENST00000367054 SOGA1O94964 1423 aa25.15■■□□□ 1.62
SOD2-202ENST00000367054 CHD1O14646 1710 aa25.12■■□□□ 1.61
SOD2-202ENST00000367054 WDR97A6NE52 1622 aa25.09■■□□□ 1.61
SOD2-202ENST00000367054 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
SOD2-202ENST00000367054 TRIM41Q8WV44 630 aa25■■□□□ 1.59
SOD2-202ENST00000367054 RIMBP3CA6NJZ7 1639 aa24.97■■□□□ 1.59
SOD2-202ENST00000367054 RIMBP3BA6NNM3 1639 aa24.97■■□□□ 1.59
SOD2-202ENST00000367054 RIMBP3Q9UFD9 1639 aa24.97■■□□□ 1.59
SOD2-202ENST00000367054 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
SOD2-202ENST00000367054 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
SOD2-202ENST00000367054 PBRM1Q86U86 1689 aa24.95■■□□□ 1.58
SOD2-202ENST00000367054 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
SOD2-202ENST00000367054 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
SOD2-202ENST00000367054 ABCA10Q8WWZ4 1543 aa24.92■■□□□ 1.58
SOD2-202ENST00000367054 GRIN2BQ13224 1484 aa24.91■■□□□ 1.58
SOD2-202ENST00000367054 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
SOD2-202ENST00000367054 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.58
SOD2-202ENST00000367054 WRNQ14191 1432 aaPredicted RBP eCLIP24.89■■□□□ 1.58
SOD2-202ENST00000367054 FBLN2P98095 1184 aa24.89■■□□□ 1.58
SOD2-202ENST00000367054 ARHGEF11O15085 1522 aa24.89■■□□□ 1.57
SOD2-202ENST00000367054 GAPVD1Q14C86 1478 aa24.88■■□□□ 1.57
SOD2-202ENST00000367054 SYNJ2O15056 1496 aa24.81■■□□□ 1.56
SOD2-202ENST00000367054 CLASP1Q7Z460 1538 aa24.78■■□□□ 1.56
SOD2-202ENST00000367054 CHMP7Q8WUX9 453 aaPredicted RBP24.76■■□□□ 1.55
SOD2-202ENST00000367054 ADAMTS12P58397 1594 aa24.7■■□□□ 1.54
SOD2-202ENST00000367054 ARAP1Q96P48 1450 aa24.68■■□□□ 1.54
SOD2-202ENST00000367054 GRIN2AQ12879 1464 aa24.62■■□□□ 1.53
SOD2-202ENST00000367054 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
SOD2-202ENST00000367054 CYB5RLQ6IPT4 315 aa24.61■■□□□ 1.53
SOD2-202ENST00000367054 FHAD1B1AJZ9 1412 aa24.56■■□□□ 1.52
SOD2-202ENST00000367054 CEP170Q5SW79 1584 aa24.55■■□□□ 1.52
SOD2-202ENST00000367054 NUP160Q12769 1436 aa24.52■■□□□ 1.52
SOD2-202ENST00000367054 ERCC6L2Q5T890 1561 aa24.43■■□□□ 1.5
SOD2-202ENST00000367054 SHROOM2Q13796 1616 aa24.43■■□□□ 1.5
SOD2-202ENST00000367054 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
SOD2-202ENST00000367054 CUL7Q14999 1698 aa24.36■■□□□ 1.49
SOD2-202ENST00000367054 RUSC2Q8N2Y8 1516 aa24.35■■□□□ 1.49
SOD2-202ENST00000367054 IGF1RP08069 1367 aa24.33■■□□□ 1.49
SOD2-202ENST00000367054 PRG4Q92954 1404 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms