RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 DCAF8L2P0C7V8 631 aa30.31■■■□□ 2.44
CDCP1-201ENST00000296129 NISCHQ9Y2I1 1504 aa29.63■■■□□ 2.33
CDCP1-201ENST00000296129 SUPT5HO00267 1087 aaKnown RBP28.82■■■□□ 2.2
CDCP1-201ENST00000296129 SHROOM4Q9ULL8 1493 aa28.54■■■□□ 2.16
CDCP1-201ENST00000296129 EHMT2Q96KQ7 1210 aa27.84■■■□□ 2.05
CDCP1-201ENST00000296129 FAM9AQ8IZU1 332 aaPredicted RBP27.16■■□□□ 1.94
CDCP1-201ENST00000296129 APLP2Q06481 763 aa27.12■■□□□ 1.93
CDCP1-201ENST00000296129 TTBK1Q5TCY1 1321 aaPredicted RBP26.88■■□□□ 1.89
CDCP1-201ENST00000296129 PCGF6Q9BYE7 350 aa26.75■■□□□ 1.87
CDCP1-201ENST00000296129 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
CDCP1-201ENST00000296129 RANGAP1P46060 587 aaPredicted RBP26.64■■□□□ 1.86
CDCP1-201ENST00000296129 PELP1Q8IZL8 1130 aaKnown RBP26.54■■□□□ 1.84
CDCP1-201ENST00000296129 ATP1B4Q9UN42 357 aaPredicted RBP26.33■■□□□ 1.81
CDCP1-201ENST00000296129 UBTFP17480 764 aaKnown RBP26.32■■□□□ 1.8
CDCP1-201ENST00000296129 CCER1Q8TC90 406 aaPredicted RBP26.24■■□□□ 1.79
CDCP1-201ENST00000296129 ZEB1P37275 1124 aaPredicted RBP26.18■■□□□ 1.78
CDCP1-201ENST00000296129 PPARGC1BQ86YN6 1023 aaKnown RBP25.96■■□□□ 1.75
CDCP1-201ENST00000296129 CENPBP07199 599 aaPredicted RBP25.91■■□□□ 1.74
CDCP1-201ENST00000296129 TRIM26Q12899 539 aaPredicted RBP25.68■■□□□ 1.7
CDCP1-201ENST00000296129 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
CDCP1-201ENST00000296129 LOC105371045A0A1W2PR82 267 aa25.64■■□□□ 1.69
CDCP1-201ENST00000296129 YTHDC1Q96MU7 727 aaKnown RBP25.59■■□□□ 1.69
CDCP1-201ENST00000296129 ABCC9O60706 1549 aa25.49■■□□□ 1.67
CDCP1-201ENST00000296129 ERICH6Q7L0X2 663 aa25.48■■□□□ 1.67
CDCP1-201ENST00000296129 ITGAEP38570 1179 aa25.47■■□□□ 1.67
CDCP1-201ENST00000296129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.4■■□□□ 1.66
CDCP1-201ENST00000296129 HNRNPUL2Q1KMD3 747 aaKnown RBP25.4■■□□□ 1.66
CDCP1-201ENST00000296129 NEFLP07196 543 aa25.37■■□□□ 1.65
CDCP1-201ENST00000296129 PABPN1Q86U42 306 aaKnown RBP eCLIP25.32■■□□□ 1.64
CDCP1-201ENST00000296129 HRCP23327 699 aa25.32■■□□□ 1.64
CDCP1-201ENST00000296129 MYT1LQ9UL68 1186 aa25.23■■□□□ 1.63
CDCP1-201ENST00000296129 POLR3GLQ9BT43 218 aa25.11■■□□□ 1.61
CDCP1-201ENST00000296129 FAM50AQ14320 339 aaKnown RBP24.88■■□□□ 1.57
CDCP1-201ENST00000296129 CNGB1Q14028 1251 aaPredicted RBP24.88■■□□□ 1.57
CDCP1-201ENST00000296129 DIEXFQ68CQ4 756 aaKnown RBP24.68■■□□□ 1.54
CDCP1-201ENST00000296129 TRIM52Q96A61 297 aa24.68■■□□□ 1.54
CDCP1-201ENST00000296129 SCRIBQ14160 1630 aa24.64■■□□□ 1.54
CDCP1-201ENST00000296129 NEUROD1Q13562 356 aa24.61■■□□□ 1.53
CDCP1-201ENST00000296129 SLC4A1APQ9BWU0 796 aaKnown RBP24.61■■□□□ 1.53
CDCP1-201ENST00000296129 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
CDCP1-201ENST00000296129 FBLN2P98095 1184 aa24.54■■□□□ 1.52
CDCP1-201ENST00000296129 DAXXQ9UER7 740 aaPredicted RBP24.51■■□□□ 1.51
CDCP1-201ENST00000296129 CSRNP3Q8WYN3 585 aa24.45■■□□□ 1.5
CDCP1-201ENST00000296129 P3H3Q8IVL6 736 aa24.43■■□□□ 1.5
CDCP1-201ENST00000296129 ZNF326Q5BKZ1 582 aaKnown RBP24.36■■□□□ 1.49
CDCP1-201ENST00000296129 MYT1Q01538 1121 aa24.36■■□□□ 1.49
CDCP1-201ENST00000296129 ARID3CA6NKF2 412 aa24.34■■□□□ 1.49
CDCP1-201ENST00000296129 CCDC180Q9P1Z9 1646 aa24.34■■□□□ 1.49
CDCP1-201ENST00000296129 ANP32CO43423 234 aa24.22■■□□□ 1.47
CDCP1-201ENST00000296129 ZNF316A6NFI3 1004 aaPredicted RBP24.19■■□□□ 1.46
CDCP1-201ENST00000296129 CLSPNQ9HAW4 1339 aa24.14■■□□□ 1.46
CDCP1-201ENST00000296129 ZNF777Q9ULD5 760 aaPredicted RBP24.12■■□□□ 1.45
CDCP1-201ENST00000296129 BCANQ96GW7 911 aa24.1■■□□□ 1.45
CDCP1-201ENST00000296129 GTF3C3Q9Y5Q9 886 aa24.05■■□□□ 1.44
CDCP1-201ENST00000296129 CDK11AQ9UQ88 783 aaPredicted RBP24■■□□□ 1.43
CDCP1-201ENST00000296129 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
CDCP1-201ENST00000296129 RTL5Q5HYW3 569 aaPredicted RBP23.9■■□□□ 1.42
CDCP1-201ENST00000296129 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
CDCP1-201ENST00000296129 TONSLQ96HA7 1378 aa23.8■■□□□ 1.4
CDCP1-201ENST00000296129 CANXP27824 592 aaKnown RBP23.76■■□□□ 1.39
CDCP1-201ENST00000296129 RSF1Q96T23 1441 aaPredicted RBP23.74■■□□□ 1.39
CDCP1-201ENST00000296129 ACIN1Q9UKV3 1341 aaKnown RBP23.74■■□□□ 1.39
CDCP1-201ENST00000296129 CHIC2Q9UKJ5 165 aa23.72■■□□□ 1.39
CDCP1-201ENST00000296129 SLC24A1O60721 1099 aa23.7■■□□□ 1.38
CDCP1-201ENST00000296129 ZBTB47Q9UFB7 747 aaPredicted RBP23.7■■□□□ 1.38
CDCP1-201ENST00000296129 NEFMP07197 916 aa23.67■■□□□ 1.38
CDCP1-201ENST00000296129 CLIP1P30622 1438 aa23.66■■□□□ 1.38
CDCP1-201ENST00000296129 MYO15BQ96JP2 1530 aa23.65■■□□□ 1.38
CDCP1-201ENST00000296129 CHGAP10645 457 aaKnown RBP23.65■■□□□ 1.38
CDCP1-201ENST00000296129 NACADO15069 1562 aa23.65■■□□□ 1.38
CDCP1-201ENST00000296129 BCL11AQ9H165 835 aa23.63■■□□□ 1.37
CDCP1-201ENST00000296129 MTUS2Q5JR59 1369 aa23.6■■□□□ 1.37
CDCP1-201ENST00000296129 NPM1P06748 294 aaKnown RBP eCLIP23.6■■□□□ 1.37
CDCP1-201ENST00000296129 ESF1Q9H501 851 aaKnown RBP23.6■■□□□ 1.37
CDCP1-201ENST00000296129 DDX10Q13206 875 aaKnown RBP23.59■■□□□ 1.37
CDCP1-201ENST00000296129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.57■■□□□ 1.36
CDCP1-201ENST00000296129 CHMP7Q8WUX9 453 aaPredicted RBP23.57■■□□□ 1.36
CDCP1-201ENST00000296129 STAG3Q9UJ98 1225 aa23.55■■□□□ 1.36
CDCP1-201ENST00000296129 GOLGA3Q08378 1498 aa23.54■■□□□ 1.36
CDCP1-201ENST00000296129 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
CDCP1-201ENST00000296129 CEP162Q5TB80 1403 aa23.5■■□□□ 1.35
CDCP1-201ENST00000296129 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
CDCP1-201ENST00000296129 EEA1Q15075 1411 aa23.49■■□□□ 1.35
CDCP1-201ENST00000296129 FAM9BQ8IZU0 186 aa23.48■■□□□ 1.35
CDCP1-201ENST00000296129 HNRNPUQ00839 825 aaKnown RBP eCLIP23.48■■□□□ 1.35
CDCP1-201ENST00000296129 PLPPR3Q6T4P5 718 aa23.47■■□□□ 1.35
CDCP1-201ENST00000296129 TSPY4P0CV99 314 aa23.46■■□□□ 1.35
CDCP1-201ENST00000296129 TSPY10P0CW01 314 aa23.46■■□□□ 1.35
CDCP1-201ENST00000296129 FKBP8Q14318 412 aa23.45■■□□□ 1.35
CDCP1-201ENST00000296129 KDM2AQ9Y2K7 1162 aa23.41■■□□□ 1.34
CDCP1-201ENST00000296129 RRP7BPQ9NSQ0 103 aa23.38■■□□□ 1.33
CDCP1-201ENST00000296129 ANP32AP39687 249 aaKnown RBP23.37■■□□□ 1.33
CDCP1-201ENST00000296129 SALL2Q9Y467 1007 aaPredicted RBP23.36■■□□□ 1.33
CDCP1-201ENST00000296129 NPM2Q86SE8 214 aaKnown RBP23.36■■□□□ 1.33
CDCP1-201ENST00000296129 KIF27Q86VH2 1401 aa23.33■■□□□ 1.33
CDCP1-201ENST00000296129 HIRIP3Q9BW71 556 aaPredicted RBP23.33■■□□□ 1.33
CDCP1-201ENST00000296129 BAZ1AQ9NRL2 1556 aaPredicted RBP23.32■■□□□ 1.32
CDCP1-201ENST00000296129 TMC1Q8TDI8 760 aa23.31■■□□□ 1.32
CDCP1-201ENST00000296129 CEP164Q9UPV0 1460 aa23.3■■□□□ 1.32
CDCP1-201ENST00000296129 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms