RNA–Protein interactions for RNA: ENST00000416242.2

LINC01388-201, Transcript of long intergenic non-protein coding RNA 1388, humanhuman

TSL 3 BASIC

Gene LINC01388, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01388-201ENST00000416242 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
LINC01388-201ENST00000416242 CCDC180Q9P1Z9 1646 aa31.09■■■□□ 2.57
LINC01388-201ENST00000416242 ABCC9O60706 1549 aa30.61■■■□□ 2.49
LINC01388-201ENST00000416242 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
LINC01388-201ENST00000416242 NACADO15069 1562 aa29.36■■■□□ 2.29
LINC01388-201ENST00000416242 DCAF8L2P0C7V8 631 aa29.22■■■□□ 2.27
LINC01388-201ENST00000416242 MYO15BQ96JP2 1530 aa29.19■■■□□ 2.26
LINC01388-201ENST00000416242 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
LINC01388-201ENST00000416242 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
LINC01388-201ENST00000416242 PABPN1Q86U42 306 aaKnown RBP eCLIP28.57■■■□□ 2.16
LINC01388-201ENST00000416242 UNC13AQ9UPW8 1703 aa28.5■■■□□ 2.15
LINC01388-201ENST00000416242 BICRAQ9NZM4 1560 aa28.44■■■□□ 2.14
LINC01388-201ENST00000416242 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
LINC01388-201ENST00000416242 SCRIBQ14160 1630 aa28.3■■■□□ 2.12
LINC01388-201ENST00000416242 DNAJC5BQ9UF47 199 aa28.24■■■□□ 2.11
LINC01388-201ENST00000416242 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
LINC01388-201ENST00000416242 CC2D2AQ9P2K1 1620 aa27.67■■■□□ 2.02
LINC01388-201ENST00000416242 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
LINC01388-201ENST00000416242 NCAPD3P42695 1498 aa27.12■■□□□ 1.93
LINC01388-201ENST00000416242 BAZ1AQ9NRL2 1556 aaPredicted RBP27.1■■□□□ 1.93
LINC01388-201ENST00000416242 SMARCA4P51532 1647 aa27.08■■□□□ 1.93
LINC01388-201ENST00000416242 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
LINC01388-201ENST00000416242 SMARCA2P51531 1590 aa27.04■■□□□ 1.92
LINC01388-201ENST00000416242 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
LINC01388-201ENST00000416242 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
LINC01388-201ENST00000416242 MROH2BQ7Z745 1585 aa26.84■■□□□ 1.89
LINC01388-201ENST00000416242 BAZ1BQ9UIG0 1483 aaKnown RBP26.83■■□□□ 1.89
LINC01388-201ENST00000416242 RSF1Q96T23 1441 aaPredicted RBP26.52■■□□□ 1.84
LINC01388-201ENST00000416242 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
LINC01388-201ENST00000416242 WIZO95785 1651 aa26.47■■□□□ 1.83
LINC01388-201ENST00000416242 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.82
LINC01388-201ENST00000416242 NESP48681 1621 aa26.39■■□□□ 1.81
LINC01388-201ENST00000416242 CUX2O14529 1486 aa26.31■■□□□ 1.8
LINC01388-201ENST00000416242 CADPSQ9ULU8 1353 aa26.31■■□□□ 1.8
LINC01388-201ENST00000416242 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
LINC01388-201ENST00000416242 PDS5BQ9NTI5 1447 aa26.3■■□□□ 1.8
LINC01388-201ENST00000416242 CFTRP13569 1480 aa26.1■■□□□ 1.77
LINC01388-201ENST00000416242 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
LINC01388-201ENST00000416242 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
LINC01388-201ENST00000416242 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
LINC01388-201ENST00000416242 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
LINC01388-201ENST00000416242 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
LINC01388-201ENST00000416242 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
LINC01388-201ENST00000416242 WDR62O43379 1518 aa25.88■■□□□ 1.73
LINC01388-201ENST00000416242 DNAJC5Q9H3Z4 198 aa25.72■■□□□ 1.71
LINC01388-201ENST00000416242 PRDM2Q13029 1718 aa25.7■■□□□ 1.7
LINC01388-201ENST00000416242 URB2Q14146 1524 aaKnown RBP25.68■■□□□ 1.7
LINC01388-201ENST00000416242 SUPT5HO00267 1087 aaKnown RBP25.64■■□□□ 1.7
LINC01388-201ENST00000416242 ABCC8Q09428 1581 aa25.6■■□□□ 1.69
LINC01388-201ENST00000416242 TOPBP1Q92547 1522 aa25.51■■□□□ 1.67
LINC01388-201ENST00000416242 DNMBPQ6XZF7 1577 aa25.47■■□□□ 1.67
LINC01388-201ENST00000416242 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
LINC01388-201ENST00000416242 POLA1P09884 1462 aaPredicted RBP25.29■■□□□ 1.64
LINC01388-201ENST00000416242 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
LINC01388-201ENST00000416242 CUX1P39880 1505 aa25.21■■□□□ 1.63
LINC01388-201ENST00000416242 SOGA1O94964 1423 aa25.2■■□□□ 1.63
LINC01388-201ENST00000416242 TARBP1Q13395 1621 aaKnown RBP25.19■■□□□ 1.62
LINC01388-201ENST00000416242 FGD5Q6ZNL6 1462 aa25.18■■□□□ 1.62
LINC01388-201ENST00000416242 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
LINC01388-201ENST00000416242 EIF4G3O43432 1585 aaKnown RBP25.15■■□□□ 1.62
LINC01388-201ENST00000416242 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
LINC01388-201ENST00000416242 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
LINC01388-201ENST00000416242 AQRO60306 1485 aaKnown RBP eCLIP25.11■■□□□ 1.61
LINC01388-201ENST00000416242 TDRD9Q8NDG6 1382 aaKnown RBP25.05■■□□□ 1.6
LINC01388-201ENST00000416242 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
LINC01388-201ENST00000416242 ABCA10Q8WWZ4 1543 aa24.97■■□□□ 1.59
LINC01388-201ENST00000416242 GRIN2BQ13224 1484 aa24.96■■□□□ 1.59
LINC01388-201ENST00000416242 TOP2BQ02880 1626 aa24.95■■□□□ 1.58
LINC01388-201ENST00000416242 MAGI1Q96QZ7 1491 aaPredicted RBP24.93■■□□□ 1.58
LINC01388-201ENST00000416242 BIVM-ERCC5R4GMW8 1640 aa24.91■■□□□ 1.58
LINC01388-201ENST00000416242 GAPVD1Q14C86 1478 aa24.9■■□□□ 1.58
LINC01388-201ENST00000416242 SNAPC4Q5SXM2 1469 aa24.9■■□□□ 1.58
LINC01388-201ENST00000416242 SYNJ1O43426 1573 aa24.88■■□□□ 1.57
LINC01388-201ENST00000416242 FBLN2P98095 1184 aa24.88■■□□□ 1.57
LINC01388-201ENST00000416242 CHMP7Q8WUX9 453 aaPredicted RBP24.83■■□□□ 1.57
LINC01388-201ENST00000416242 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.56
LINC01388-201ENST00000416242 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
LINC01388-201ENST00000416242 CHD1O14646 1710 aa24.78■■□□□ 1.56
LINC01388-201ENST00000416242 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
LINC01388-201ENST00000416242 TRIM41Q8WV44 630 aa24.72■■□□□ 1.55
LINC01388-201ENST00000416242 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
LINC01388-201ENST00000416242 ERICH3Q5RHP9 1530 aa24.67■■□□□ 1.54
LINC01388-201ENST00000416242 RIMBP3CA6NJZ7 1639 aa24.66■■□□□ 1.54
LINC01388-201ENST00000416242 RIMBP3BA6NNM3 1639 aa24.66■■□□□ 1.54
LINC01388-201ENST00000416242 RIMBP3Q9UFD9 1639 aa24.66■■□□□ 1.54
LINC01388-201ENST00000416242 FHAD1B1AJZ9 1412 aa24.65■■□□□ 1.54
LINC01388-201ENST00000416242 CLASP1Q7Z460 1538 aa24.64■■□□□ 1.53
LINC01388-201ENST00000416242 ADAMTS12P58397 1594 aa24.62■■□□□ 1.53
LINC01388-201ENST00000416242 GRIN2AQ12879 1464 aa24.61■■□□□ 1.53
LINC01388-201ENST00000416242 KIF27Q86VH2 1401 aa24.57■■□□□ 1.52
LINC01388-201ENST00000416242 NUP160Q12769 1436 aa24.53■■□□□ 1.52
LINC01388-201ENST00000416242 CYB5RLQ6IPT4 315 aa24.5■■□□□ 1.51
LINC01388-201ENST00000416242 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
LINC01388-201ENST00000416242 IGF1RP08069 1367 aa24.45■■□□□ 1.5
LINC01388-201ENST00000416242 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
LINC01388-201ENST00000416242 CUL7Q14999 1698 aa24.37■■□□□ 1.49
LINC01388-201ENST00000416242 CARMIL1Q5VZK9 1371 aa24.31■■□□□ 1.48
LINC01388-201ENST00000416242 SHROOM2Q13796 1616 aa24.29■■□□□ 1.48
LINC01388-201ENST00000416242 JPH4Q96JJ6 628 aa24.27■■□□□ 1.48
LINC01388-201ENST00000416242 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms