Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.127e-6■■□□□ 14.4
U2AF2P26368 PYGB-203ENST00000471359 726 ntTSL 215.74■□□□□ 0.117e-6■■□□□ 14.4
U2AF2P26368 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.117e-6■■□□□ 14.4
U2AF2P26368 ILKAP-205ENST00000465131 750 ntTSL 215.68■□□□□ 0.17e-6■■□□□ 14.4
U2AF2P26368 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.087e-6■■□□□ 14.4
U2AF2P26368 IL4R-218ENST00000568746 2900 ntTSL 215.4■□□□□ 0.067e-6■■□□□ 14.4
U2AF2P26368 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.057e-6■■□□□ 14.4
U2AF2P26368 PCNX4-209ENST00000555569 515 ntTSL 315.34■□□□□ 0.057e-6■■□□□ 14.4
U2AF2P26368 NINL-202ENST00000336104 439 ntTSL 315.27■□□□□ 0.047e-6■■□□□ 14.4
U2AF2P26368 NINL-207ENST00000496509 735 ntTSL 515.23■□□□□ 0.037e-6■■□□□ 14.4
U2AF2P26368 WIPI1-205ENST00000587731 829 ntTSL 315.2■□□□□ 0.027e-6■■□□□ 14.4
U2AF2P26368 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.023e-7■■□□□ 14.4
U2AF2P26368 SFXN4-208ENST00000490417 952 ntTSL 215.16■□□□□ 0.027e-6■■□□□ 14.4
U2AF2P26368 RAB5B-203ENST00000546810 589 ntTSL 215.11■□□□□ 0.017e-6■■□□□ 14.4
U2AF2P26368 AFG1L-203ENST00000430458 542 ntTSL 515.01□□□□□ -0.017e-6■■□□□ 14.4
U2AF2P26368 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC14.97□□□□□ -0.017e-6■■□□□ 14.4
U2AF2P26368 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.97□□□□□ -0.017e-6■■□□□ 14.4
U2AF2P26368 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC14.94□□□□□ -0.027e-6■■□□□ 14.4
U2AF2P26368 SP140L-207ENST00000466656 566 ntTSL 414.93□□□□□ -0.027e-6■■□□□ 14.4
U2AF2P26368 PHC1-211ENST00000542346 483 ntTSL 514.87□□□□□ -0.037e-6■■□□□ 14.4
U2AF2P26368 ZNF19-209ENST00000566202 587 ntTSL 514.87□□□□□ -0.037e-6■■□□□ 14.4
U2AF2P26368 SP140L-209ENST00000496870 621 ntTSL 514.83□□□□□ -0.047e-6■■□□□ 14.4
U2AF2P26368 ERGIC3-209ENST00000447986 1632 ntTSL 1 (best)14.81□□□□□ -0.047e-6■■□□□ 14.4
U2AF2P26368 AAK1-207ENST00000489327 1432 ntTSL 514.79□□□□□ -0.047e-6■■□□□ 14.4
U2AF2P26368 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.077e-6■■□□□ 14.4
U2AF2P26368 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.097e-6■■□□□ 14.4
U2AF2P26368 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC14.46□□□□□ -0.091e-10■■□□□ 14.4
U2AF2P26368 PROS1-202ENST00000394236 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.17e-6■■□□□ 14.4
U2AF2P26368 SGTA-204ENST00000589251 637 ntTSL 314.41□□□□□ -0.17e-6■■□□□ 14.4
U2AF2P26368 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.17e-6■■□□□ 14.4
U2AF2P26368 RNF207-209ENST00000496676 3020 ntTSL 214.34□□□□□ -0.111e-10■■□□□ 14.4
U2AF2P26368 MRPL22-207ENST00000523037 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.111e-6■■□□□ 14.4
U2AF2P26368 GALK2-220ENST00000560654 784 ntTSL 514.32□□□□□ -0.127e-6■■□□□ 14.4
U2AF2P26368 RAB5B-204ENST00000548068 596 ntTSL 414.28□□□□□ -0.127e-6■■□□□ 14.4
U2AF2P26368 KRBA1-209ENST00000621069 3449 ntTSL 1 (best)14.26□□□□□ -0.137e-6■■□□□ 14.4
U2AF2P26368 ZNF213-AS1-204ENST00000572691 3232 ntTSL 5 BASIC14.24□□□□□ -0.137e-6■■□□□ 14.4
U2AF2P26368 IL4R-215ENST00000565915 541 ntTSL 414.18□□□□□ -0.147e-6■■□□□ 14.4
U2AF2P26368 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC14.03□□□□□ -0.163e-7■■□□□ 14.4
U2AF2P26368 ERGIC3-205ENST00000413587 977 ntTSL 514.02□□□□□ -0.177e-6■■□□□ 14.4
U2AF2P26368 KRBA1-203ENST00000485033 3434 ntTSL 5 BASIC14□□□□□ -0.177e-6■■□□□ 14.4
U2AF2P26368 KRBA1-201ENST00000319551 4020 ntTSL 1 (best) BASIC13.99□□□□□ -0.177e-6■■□□□ 14.4
U2AF2P26368 RNF207-201ENST00000377939 3924 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.171e-10■■□□□ 14.4
U2AF2P26368 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC13.98□□□□□ -0.177e-6■■□□□ 14.4
U2AF2P26368 ZNF213-AS1-202ENST00000571449 919 ntTSL 3 BASIC13.88□□□□□ -0.197e-6■■□□□ 14.4
U2AF2P26368 TMEM141-206ENST00000489739 551 ntTSL 313.88□□□□□ -0.197e-6■■□□□ 14.4
U2AF2P26368 GALK2-216ENST00000560031 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.197e-6■■□□□ 14.4
U2AF2P26368 COG1-202ENST00000438720 4051 ntTSL 1 (best)13.79□□□□□ -0.27e-6■■□□□ 14.4
U2AF2P26368 MYL6B-208ENST00000550550 322 ntTSL 213.78□□□□□ -0.27e-6■■□□□ 14.4
U2AF2P26368 HSP90B1-203ENST00000548462 3032 ntTSL 213.77□□□□□ -0.217e-6■■□□□ 14.4
U2AF2P26368 ERGIC3-211ENST00000461043 728 ntTSL 213.76□□□□□ -0.217e-6■■□□□ 14.4
U2AF2P26368 RPS21-203ENST00000370592 401 ntTSL 213.73□□□□□ -0.217e-6■■□□□ 14.4
U2AF2P26368 COG1-210ENST00000618996 3369 ntTSL 1 (best) BASIC13.73□□□□□ -0.217e-6■■□□□ 14.4
U2AF2P26368 IL4R-212ENST00000565179 579 ntTSL 313.72□□□□□ -0.217e-6■■□□□ 14.4
U2AF2P26368 RPS21-205ENST00000492356 429 ntTSL 1 (best)13.61□□□□□ -0.237e-6■■□□□ 14.4
U2AF2P26368 SGK3-202ENST00000396596 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.237e-6■■□□□ 14.4
U2AF2P26368 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC13.54□□□□□ -0.247e-6■■□□□ 14.4
U2AF2P26368 MYL6B-204ENST00000549178 971 ntTSL 513.5□□□□□ -0.257e-6■■□□□ 14.4
U2AF2P26368 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.257e-6■■□□□ 14.4
U2AF2P26368 ZNF19-214ENST00000569717 1947 ntTSL 213.47□□□□□ -0.257e-6■■□□□ 14.4
U2AF2P26368 ZNF19-205ENST00000564230 2205 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.267e-6■■□□□ 14.4
U2AF2P26368 CERS5-205ENST00000542320 951 ntTSL 213.41□□□□□ -0.267e-6■■□□□ 14.4
U2AF2P26368 GALK2-212ENST00000559454 1768 ntTSL 5 BASIC13.37□□□□□ -0.277e-6■■□□□ 14.4
U2AF2P26368 CUL9-207ENST00000504485 641 ntTSL 313.36□□□□□ -0.277e-6■■□□□ 14.4
U2AF2P26368 MYL6B-211ENST00000553066 1305 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.287e-6■■□□□ 14.4
U2AF2P26368 RTCB-202ENST00000463455 628 ntTSL 213.24□□□□□ -0.297e-6■■□□□ 14.4
U2AF2P26368 IL4R-201ENST00000170630 3380 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.297e-6■■□□□ 14.4
U2AF2P26368 IL4R-203ENST00000543915 3539 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.297e-6■■□□□ 14.4
U2AF2P26368 PSAT1-202ENST00000376588 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.31e-10■■□□□ 14.4
U2AF2P26368 KRBA1-207ENST00000496259 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.37e-6■■□□□ 14.4
U2AF2P26368 NSRP1-211ENST00000584154 583 ntTSL 312.98□□□□□ -0.337e-6■■□□□ 14.4
U2AF2P26368 NCDN-204ENST00000423723 986 ntTSL 312.98□□□□□ -0.337e-6■■□□□ 14.4
U2AF2P26368 ZNF213-AS1-203ENST00000571963 1592 ntTSL 2 BASIC12.97□□□□□ -0.337e-6■■□□□ 14.4
U2AF2P26368 AC010547.5-201ENST00000561908 3677 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.357e-6■■□□□ 14.4
U2AF2P26368 SP140L-202ENST00000396563 2397 ntTSL 1 (best) BASIC12.81□□□□□ -0.367e-6■■□□□ 14.4
U2AF2P26368 ERGIC3-206ENST00000416206 1235 ntTSL 512.8□□□□□ -0.367e-6■■□□□ 14.4
U2AF2P26368 ERGIC3-207ENST00000438317 590 ntTSL 312.76□□□□□ -0.377e-6■■□□□ 14.4
U2AF2P26368 IL4R-202ENST00000395762 3685 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.377e-6■■□□□ 14.4
U2AF2P26368 HDLBP-242ENST00000488013 651 ntTSL 212.66□□□□□ -0.387e-6■■□□□ 14.4
U2AF2P26368 ZNF213-AS1-207ENST00000575089 634 ntTSL 212.64□□□□□ -0.397e-6■■□□□ 14.4
U2AF2P26368 MYL6B-210ENST00000552568 703 ntTSL 5 BASIC12.63□□□□□ -0.397e-6■■□□□ 14.4
U2AF2P26368 CUL9-218ENST00000515773 8150 ntTSL 212.61□□□□□ -0.397e-6■■□□□ 14.4
U2AF2P26368 RPS21-204ENST00000450116 418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.397e-6■■□□□ 14.4
U2AF2P26368 AAK1-212ENST00000623317 1019 ntTSL 512.6□□□□□ -0.397e-6■■□□□ 14.4
U2AF2P26368 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.397e-6■■□□□ 14.4
U2AF2P26368 PHC1-201ENST00000433083 5033 ntTSL 1 (best) BASIC12.56□□□□□ -0.47e-6■■□□□ 14.4
U2AF2P26368 PHKA1-203ENST00000373542 6020 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.47e-6■■□□□ 14.4
U2AF2P26368 BPHL-211ENST00000488487 1137 ntTSL 512.47□□□□□ -0.417e-6■■□□□ 14.4
U2AF2P26368 MTMR14-213ENST00000606184 2966 nt12.45□□□□□ -0.427e-6■■□□□ 14.4
U2AF2P26368 MYL6B-207ENST00000550443 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.427e-6■■□□□ 14.4
U2AF2P26368 ZNF213-AS1-210ENST00000576590 541 ntTSL 4 BASIC12.41□□□□□ -0.427e-6■■□□□ 14.4
U2AF2P26368 PYGB-202ENST00000428458 734 ntTSL 312.36□□□□□ -0.437e-6■■□□□ 14.4
U2AF2P26368 PHC1-214ENST00000544916 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.437e-6■■□□□ 14.4
U2AF2P26368 A1CF-208ENST00000414883 885 ntTSL 512.26□□□□□ -0.453e-7■■□□□ 14.4
U2AF2P26368 GALK2-215ENST00000559963 794 ntTSL 212.26□□□□□ -0.457e-6■■□□□ 14.4
U2AF2P26368 GALK2-202ENST00000396509 1834 ntTSL 2 BASIC12.16□□□□□ -0.467e-6■■□□□ 14.4
U2AF2P26368 RHOT1-210ENST00000581094 3231 ntTSL 2 BASIC12.13□□□□□ -0.477e-6■■□□□ 14.4
U2AF2P26368 ACOT8-208ENST00000484975 3059 ntTSL 212.11□□□□□ -0.477e-6■■□□□ 14.4
U2AF2P26368 NSRP1-201ENST00000247026 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.487e-6■■□□□ 14.4
U2AF2P26368 CERS5-224ENST00000551005 2700 ntTSL 211.91□□□□□ -0.57e-6■■□□□ 14.4
U2AF2P26368 IL4R-213ENST00000565352 424 ntTSL 511.84□□□□□ -0.517e-6■■□□□ 14.4
Retrieved 100 of 36,523 protein–RNA pairs in 307.2 ms