RNA–Protein interactions for RNA: ENST00000618996.4

COG1-210, Transcript of component of oligomeric golgi complex 1, humanhuman

TSL 1 (best) BASIC

Gene COG1, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG1-210ENST00000618996 NISCHQ9Y2I1 1504 aa23.08■■□□□ 1.29
COG1-210ENST00000618996 SHROOM4Q9ULL8 1493 aa20.3■□□□□ 0.84
COG1-210ENST00000618996 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
COG1-210ENST00000618996 DCAF8L2P0C7V8 631 aa19.58■□□□□ 0.73
COG1-210ENST00000618996 ZCCHC6Q5VYS8 1495 aaKnown RBP19.53■□□□□ 0.72
COG1-210ENST00000618996 MYO15BQ96JP2 1530 aa19.38■□□□□ 0.69
COG1-210ENST00000618996 CHIC1Q5VXU3 224 aa19.36■□□□□ 0.69
COG1-210ENST00000618996 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
COG1-210ENST00000618996 PCGF6Q9BYE7 350 aa19.26■□□□□ 0.67
COG1-210ENST00000618996 HRCP23327 699 aa19.15■□□□□ 0.66
COG1-210ENST00000618996 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.65
COG1-210ENST00000618996 LOC105371045A0A1W2PR82 267 aa18.97■□□□□ 0.63
COG1-210ENST00000618996 EHMT2Q96KQ7 1210 aa18.86■□□□□ 0.61
COG1-210ENST00000618996 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
COG1-210ENST00000618996 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
COG1-210ENST00000618996 TRIM26Q12899 539 aaPredicted RBP18.54■□□□□ 0.56
COG1-210ENST00000618996 SCRIBQ14160 1630 aa18.48■□□□□ 0.55
COG1-210ENST00000618996 ABCC9O60706 1549 aa18.47■□□□□ 0.55
COG1-210ENST00000618996 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
COG1-210ENST00000618996 RSF1Q96T23 1441 aaPredicted RBP18.44■□□□□ 0.54
COG1-210ENST00000618996 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
COG1-210ENST00000618996 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
COG1-210ENST00000618996 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
COG1-210ENST00000618996 ZEB1P37275 1124 aaPredicted RBP18.13■□□□□ 0.49
COG1-210ENST00000618996 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
COG1-210ENST00000618996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
COG1-210ENST00000618996 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
COG1-210ENST00000618996 WIZO95785 1651 aa17.97■□□□□ 0.47
COG1-210ENST00000618996 NACADO15069 1562 aa17.88■□□□□ 0.45
COG1-210ENST00000618996 CCER1Q8TC90 406 aaPredicted RBP17.88■□□□□ 0.45
COG1-210ENST00000618996 ABCC8Q09428 1581 aa17.75■□□□□ 0.43
COG1-210ENST00000618996 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
COG1-210ENST00000618996 YTHDC1Q96MU7 727 aaKnown RBP17.71■□□□□ 0.43
COG1-210ENST00000618996 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.42
COG1-210ENST00000618996 PELP1Q8IZL8 1130 aaKnown RBP17.69■□□□□ 0.42
COG1-210ENST00000618996 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
COG1-210ENST00000618996 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
COG1-210ENST00000618996 SOGA1O94964 1423 aa17.64■□□□□ 0.41
COG1-210ENST00000618996 UBTFP17480 764 aaKnown RBP17.62■□□□□ 0.41
COG1-210ENST00000618996 GTF3C3Q9Y5Q9 886 aa17.62■□□□□ 0.41
COG1-210ENST00000618996 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
COG1-210ENST00000618996 RANGAP1P46060 587 aaPredicted RBP17.59■□□□□ 0.41
COG1-210ENST00000618996 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
COG1-210ENST00000618996 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
COG1-210ENST00000618996 RUSC2Q8N2Y8 1516 aa17.56■□□□□ 0.4
COG1-210ENST00000618996 ACIN1Q9UKV3 1341 aaKnown RBP17.56■□□□□ 0.4
COG1-210ENST00000618996 SMARCA2P51531 1590 aa17.52■□□□□ 0.4
COG1-210ENST00000618996 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
COG1-210ENST00000618996 CSRNP3Q8WYN3 585 aa17.52■□□□□ 0.4
COG1-210ENST00000618996 SMARCA4P51532 1647 aa17.52■□□□□ 0.4
COG1-210ENST00000618996 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
COG1-210ENST00000618996 TNIKQ9UKE5 1360 aa17.47■□□□□ 0.39
COG1-210ENST00000618996 CENPBP07199 599 aaPredicted RBP17.44■□□□□ 0.38
COG1-210ENST00000618996 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
COG1-210ENST00000618996 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
COG1-210ENST00000618996 GOLGA3Q08378 1498 aa17.34■□□□□ 0.37
COG1-210ENST00000618996 ZNF316A6NFI3 1004 aaPredicted RBP17.34■□□□□ 0.37
COG1-210ENST00000618996 EEA1Q15075 1411 aa17.32■□□□□ 0.36
COG1-210ENST00000618996 CLIP1P30622 1438 aa17.23■□□□□ 0.35
COG1-210ENST00000618996 MIER1Q8N108 512 aa17.23■□□□□ 0.35
COG1-210ENST00000618996 SYNJ1O43426 1573 aa17.22■□□□□ 0.35
COG1-210ENST00000618996 APLP2Q06481 763 aa17.22■□□□□ 0.35
COG1-210ENST00000618996 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
COG1-210ENST00000618996 BICRAQ9NZM4 1560 aa17.16■□□□□ 0.34
COG1-210ENST00000618996 RAPGEF2Q9Y4G8 1499 aa17.15■□□□□ 0.34
COG1-210ENST00000618996 VPS8Q8N3P4 1428 aa17.12■□□□□ 0.33
COG1-210ENST00000618996 KIF21BO75037 1637 aa17.09■□□□□ 0.33
COG1-210ENST00000618996 BAZ1BQ9UIG0 1483 aaKnown RBP17.07■□□□□ 0.32
COG1-210ENST00000618996 ATAD2BQ9ULI0 1458 aa17.07■□□□□ 0.32
COG1-210ENST00000618996 ITGAEP38570 1179 aa17.03■□□□□ 0.32
COG1-210ENST00000618996 PEG3Q9GZU2 1588 aa17.02■□□□□ 0.32
COG1-210ENST00000618996 KANK4Q5T7N3 995 aaPredicted RBP16.99■□□□□ 0.31
COG1-210ENST00000618996 DHX57Q6P158 1386 aaKnown RBP16.91■□□□□ 0.3
COG1-210ENST00000618996 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
COG1-210ENST00000618996 ARAP1Q96P48 1450 aa16.88■□□□□ 0.29
COG1-210ENST00000618996 BCANQ96GW7 911 aa16.88■□□□□ 0.29
COG1-210ENST00000618996 PRXQ9BXM0 1461 aa16.82■□□□□ 0.28
COG1-210ENST00000618996 MYT1Q01538 1121 aa16.8■□□□□ 0.28
COG1-210ENST00000618996 CUX1P39880 1505 aa16.77■□□□□ 0.27
COG1-210ENST00000618996 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
COG1-210ENST00000618996 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
COG1-210ENST00000618996 CLSPNQ9HAW4 1339 aa16.75■□□□□ 0.27
COG1-210ENST00000618996 KIF27Q86VH2 1401 aa16.75■□□□□ 0.27
COG1-210ENST00000618996 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
COG1-210ENST00000618996 ATP1B4Q9UN42 357 aaPredicted RBP16.73■□□□□ 0.27
COG1-210ENST00000618996 CCNB3Q8WWL7 1395 aa16.73■□□□□ 0.27
COG1-210ENST00000618996 HIRIP3Q9BW71 556 aaPredicted RBP16.71■□□□□ 0.27
COG1-210ENST00000618996 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.26
COG1-210ENST00000618996 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
COG1-210ENST00000618996 ARHGAP35Q9NRY4 1499 aa16.7■□□□□ 0.26
COG1-210ENST00000618996 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
COG1-210ENST00000618996 RAB3GAP2Q9H2M9 1393 aa16.65■□□□□ 0.26
COG1-210ENST00000618996 FAM50AQ14320 339 aaKnown RBP16.64■□□□□ 0.26
COG1-210ENST00000618996 SIN3AQ96ST3 1273 aa16.63■□□□□ 0.25
COG1-210ENST00000618996 CUX2O14529 1486 aa16.62■□□□□ 0.25
COG1-210ENST00000618996 NCAPD3P42695 1498 aa16.61■□□□□ 0.25
COG1-210ENST00000618996 DDX10Q13206 875 aaKnown RBP16.58■□□□□ 0.25
COG1-210ENST00000618996 CFTRP13569 1480 aa16.58■□□□□ 0.25
COG1-210ENST00000618996 IGF1RP08069 1367 aa16.58■□□□□ 0.24
COG1-210ENST00000618996 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms