RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
A1CF-208ENST00000414883 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
A1CF-208ENST00000414883 ABCC9O60706 1549 aa23.77■■□□□ 1.4
A1CF-208ENST00000414883 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
A1CF-208ENST00000414883 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
A1CF-208ENST00000414883 NACADO15069 1562 aa22.75■■□□□ 1.23
A1CF-208ENST00000414883 MYO15BQ96JP2 1530 aa22.59■■□□□ 1.21
A1CF-208ENST00000414883 ZCCHC6Q5VYS8 1495 aaKnown RBP22.56■■□□□ 1.2
A1CF-208ENST00000414883 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
A1CF-208ENST00000414883 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
A1CF-208ENST00000414883 DCAF1Q9Y4B6 1507 aa22.44■■□□□ 1.18
A1CF-208ENST00000414883 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
A1CF-208ENST00000414883 BICRAQ9NZM4 1560 aa22.22■■□□□ 1.15
A1CF-208ENST00000414883 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
A1CF-208ENST00000414883 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
A1CF-208ENST00000414883 SCRIBQ14160 1630 aa22.02■■□□□ 1.12
A1CF-208ENST00000414883 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
A1CF-208ENST00000414883 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.05
A1CF-208ENST00000414883 CC2D2AQ9P2K1 1620 aa21.54■■□□□ 1.04
A1CF-208ENST00000414883 CECR2Q9BXF3 1484 aa21.38■■□□□ 1.01
A1CF-208ENST00000414883 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
A1CF-208ENST00000414883 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
A1CF-208ENST00000414883 ATAD2BQ9ULI0 1458 aa21■□□□□ 0.95
A1CF-208ENST00000414883 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
A1CF-208ENST00000414883 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
A1CF-208ENST00000414883 MROH2BQ7Z745 1585 aa20.91■□□□□ 0.94
A1CF-208ENST00000414883 PEG3Q9GZU2 1588 aa20.9■□□□□ 0.94
A1CF-208ENST00000414883 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
A1CF-208ENST00000414883 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
A1CF-208ENST00000414883 WIZO95785 1651 aa20.67■□□□□ 0.9
A1CF-208ENST00000414883 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
A1CF-208ENST00000414883 NESP48681 1621 aa20.57■□□□□ 0.88
A1CF-208ENST00000414883 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
A1CF-208ENST00000414883 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
A1CF-208ENST00000414883 TOP2AP11388 1531 aaKnown RBP20.42■□□□□ 0.86
A1CF-208ENST00000414883 CADPSQ9ULU8 1353 aa20.35■□□□□ 0.85
A1CF-208ENST00000414883 CUX2O14529 1486 aa20.34■□□□□ 0.85
A1CF-208ENST00000414883 KIF21AQ7Z4S6 1674 aa20.33■□□□□ 0.85
A1CF-208ENST00000414883 THOC2Q8NI27 1593 aaKnown RBP20.32■□□□□ 0.84
A1CF-208ENST00000414883 PDS5BQ9NTI5 1447 aa20.28■□□□□ 0.84
A1CF-208ENST00000414883 CFTRP13569 1480 aa20.24■□□□□ 0.83
A1CF-208ENST00000414883 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
A1CF-208ENST00000414883 FANCD2Q9BXW9 1451 aa20.12■□□□□ 0.81
A1CF-208ENST00000414883 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
A1CF-208ENST00000414883 PRDM2Q13029 1718 aa20.1■□□□□ 0.81
A1CF-208ENST00000414883 WDR62O43379 1518 aa20.09■□□□□ 0.81
A1CF-208ENST00000414883 CEP164Q9UPV0 1460 aa20.09■□□□□ 0.81
A1CF-208ENST00000414883 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
A1CF-208ENST00000414883 DNAJC5Q9H3Z4 198 aa19.92■□□□□ 0.78
A1CF-208ENST00000414883 SUPT5HO00267 1087 aaKnown RBP19.83■□□□□ 0.77
A1CF-208ENST00000414883 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
A1CF-208ENST00000414883 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
A1CF-208ENST00000414883 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
A1CF-208ENST00000414883 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
A1CF-208ENST00000414883 IFT140Q96RY7 1462 aa19.68■□□□□ 0.74
A1CF-208ENST00000414883 ZNF608Q9ULD9 1512 aaPredicted RBP19.67■□□□□ 0.74
A1CF-208ENST00000414883 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
A1CF-208ENST00000414883 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
A1CF-208ENST00000414883 POLA1P09884 1462 aaPredicted RBP19.63■□□□□ 0.73
A1CF-208ENST00000414883 CUX1P39880 1505 aa19.62■□□□□ 0.73
A1CF-208ENST00000414883 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
A1CF-208ENST00000414883 FGD5Q6ZNL6 1462 aa19.54■□□□□ 0.72
A1CF-208ENST00000414883 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
A1CF-208ENST00000414883 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.711e-6■□□□□ 10.6
A1CF-208ENST00000414883 SOGA1O94964 1423 aa19.51■□□□□ 0.71
A1CF-208ENST00000414883 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
A1CF-208ENST00000414883 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
A1CF-208ENST00000414883 BIVM-ERCC5R4GMW8 1640 aa19.41■□□□□ 0.7
A1CF-208ENST00000414883 OSCARQ8IYS5 282 aa19.41■□□□□ 0.7
A1CF-208ENST00000414883 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
A1CF-208ENST00000414883 TOP2BQ02880 1626 aa19.4■□□□□ 0.7
A1CF-208ENST00000414883 CHD1O14646 1710 aa19.37■□□□□ 0.69
A1CF-208ENST00000414883 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
A1CF-208ENST00000414883 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
A1CF-208ENST00000414883 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.69
A1CF-208ENST00000414883 SNAPC4Q5SXM2 1469 aa19.31■□□□□ 0.68
A1CF-208ENST00000414883 GRIN2BQ13224 1484 aa19.3■□□□□ 0.68
A1CF-208ENST00000414883 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
A1CF-208ENST00000414883 GAPVD1Q14C86 1478 aa19.28■□□□□ 0.68
A1CF-208ENST00000414883 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
A1CF-208ENST00000414883 RIMBP3CA6NJZ7 1639 aa19.22■□□□□ 0.67
A1CF-208ENST00000414883 RIMBP3BA6NNM3 1639 aa19.22■□□□□ 0.67
A1CF-208ENST00000414883 RIMBP3Q9UFD9 1639 aa19.22■□□□□ 0.67
A1CF-208ENST00000414883 SYNJ2O15056 1496 aa19.2■□□□□ 0.66
A1CF-208ENST00000414883 FBLN2P98095 1184 aa19.19■□□□□ 0.66
A1CF-208ENST00000414883 ARHGEF11O15085 1522 aa19.18■□□□□ 0.66
A1CF-208ENST00000414883 CLASP1Q7Z460 1538 aa19.17■□□□□ 0.66
A1CF-208ENST00000414883 ADAMTS12P58397 1594 aa19.14■□□□□ 0.65
A1CF-208ENST00000414883 CHMP7Q8WUX9 453 aaPredicted RBP19.13■□□□□ 0.65
A1CF-208ENST00000414883 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
A1CF-208ENST00000414883 TRIM41Q8WV44 630 aa19.1■□□□□ 0.65
A1CF-208ENST00000414883 GRIN2AQ12879 1464 aa19.07■□□□□ 0.64
A1CF-208ENST00000414883 FHAD1B1AJZ9 1412 aa19.05■□□□□ 0.64
A1CF-208ENST00000414883 ARAP1Q96P48 1450 aa19.04■□□□□ 0.64
A1CF-208ENST00000414883 CEP170Q5SW79 1584 aa19.02■□□□□ 0.64
A1CF-208ENST00000414883 NUP160Q12769 1436 aa19.02■□□□□ 0.64
A1CF-208ENST00000414883 IGF1RP08069 1367 aa18.97■□□□□ 0.63
A1CF-208ENST00000414883 KIF27Q86VH2 1401 aa18.95■□□□□ 0.62
A1CF-208ENST00000414883 CYB5RLQ6IPT4 315 aa18.94■□□□□ 0.62
A1CF-208ENST00000414883 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms