RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 NISCHQ9Y2I1 1504 aa31.29■■■□□ 2.6
ERGIC3-209ENST00000447986 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
ERGIC3-209ENST00000447986 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
ERGIC3-209ENST00000447986 AEBP2Q6ZN18 517 aaPredicted RBP27.07■■□□□ 1.92
ERGIC3-209ENST00000447986 ABCC9O60706 1549 aa26.97■■□□□ 1.91
ERGIC3-209ENST00000447986 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.78
ERGIC3-209ENST00000447986 ZCCHC6Q5VYS8 1495 aaKnown RBP26.1■■□□□ 1.77
ERGIC3-209ENST00000447986 NACADO15069 1562 aa26.07■■□□□ 1.76
ERGIC3-209ENST00000447986 RB1CC1Q8TDY2 1594 aa26.05■■□□□ 1.76
ERGIC3-209ENST00000447986 MYO15BQ96JP2 1530 aa25.97■■□□□ 1.75
ERGIC3-209ENST00000447986 DCAF1Q9Y4B6 1507 aa25.91■■□□□ 1.74
ERGIC3-209ENST00000447986 UNC13AQ9UPW8 1703 aa25.36■■□□□ 1.65
ERGIC3-209ENST00000447986 SCRIBQ14160 1630 aa25.31■■□□□ 1.64
ERGIC3-209ENST00000447986 PABPN1Q86U42 306 aaKnown RBP eCLIP25.24■■□□□ 1.63
ERGIC3-209ENST00000447986 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
ERGIC3-209ENST00000447986 SHROOM4Q9ULL8 1493 aa25.03■■□□□ 1.6
ERGIC3-209ENST00000447986 EIF4G1Q04637 1599 aaKnown RBP24.55■■□□□ 1.52
ERGIC3-209ENST00000447986 DNAJC5BQ9UF47 199 aa24.53■■□□□ 1.52
ERGIC3-209ENST00000447986 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.5
ERGIC3-209ENST00000447986 CECR2Q9BXF3 1484 aa24.33■■□□□ 1.49
ERGIC3-209ENST00000447986 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
ERGIC3-209ENST00000447986 SMARCA4P51532 1647 aa24.23■■□□□ 1.47
ERGIC3-209ENST00000447986 MROH2BQ7Z745 1585 aa24.09■■□□□ 1.45
ERGIC3-209ENST00000447986 SMARCA2P51531 1590 aa24.08■■□□□ 1.45
ERGIC3-209ENST00000447986 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
ERGIC3-209ENST00000447986 PHF23Q9BUL5 403 aaPredicted RBP24.05■■□□□ 1.44
ERGIC3-209ENST00000447986 NCAPD3P42695 1498 aa24.04■■□□□ 1.44
ERGIC3-209ENST00000447986 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
ERGIC3-209ENST00000447986 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
ERGIC3-209ENST00000447986 BAZ1BQ9UIG0 1483 aaKnown RBP23.91■■□□□ 1.42
ERGIC3-209ENST00000447986 RSF1Q96T23 1441 aaPredicted RBP23.9■■□□□ 1.42
ERGIC3-209ENST00000447986 WIZO95785 1651 aa23.84■■□□□ 1.41
ERGIC3-209ENST00000447986 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.37
ERGIC3-209ENST00000447986 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
ERGIC3-209ENST00000447986 LAMC3Q9Y6N6 1575 aa23.39■■□□□ 1.33
ERGIC3-209ENST00000447986 NESP48681 1621 aa23.36■■□□□ 1.33
ERGIC3-209ENST00000447986 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
ERGIC3-209ENST00000447986 CCDC88BA6NC98 1476 aa23.34■■□□□ 1.33
ERGIC3-209ENST00000447986 ERCC6Q03468 1493 aa23.29■■□□□ 1.32
ERGIC3-209ENST00000447986 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
ERGIC3-209ENST00000447986 CFTRP13569 1480 aa23.25■■□□□ 1.31
ERGIC3-209ENST00000447986 FANCD2Q9BXW9 1451 aa23.09■■□□□ 1.29
ERGIC3-209ENST00000447986 KIF21AQ7Z4S6 1674 aa23.08■■□□□ 1.29
ERGIC3-209ENST00000447986 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
ERGIC3-209ENST00000447986 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
ERGIC3-209ENST00000447986 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
ERGIC3-209ENST00000447986 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
ERGIC3-209ENST00000447986 CUX2O14529 1486 aa22.96■■□□□ 1.27
ERGIC3-209ENST00000447986 WDR62O43379 1518 aa22.87■■□□□ 1.25
ERGIC3-209ENST00000447986 URB2Q14146 1524 aaKnown RBP22.81■■□□□ 1.24
ERGIC3-209ENST00000447986 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
ERGIC3-209ENST00000447986 ABCC8Q09428 1581 aa22.79■■□□□ 1.24
ERGIC3-209ENST00000447986 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
ERGIC3-209ENST00000447986 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
ERGIC3-209ENST00000447986 CUX1P39880 1505 aa22.59■■□□□ 1.21
ERGIC3-209ENST00000447986 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.2
ERGIC3-209ENST00000447986 IFT140Q96RY7 1462 aa22.57■■□□□ 1.2
ERGIC3-209ENST00000447986 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
ERGIC3-209ENST00000447986 FGD5Q6ZNL6 1462 aa22.52■■□□□ 1.2
ERGIC3-209ENST00000447986 SOGA1O94964 1423 aa22.49■■□□□ 1.19
ERGIC3-209ENST00000447986 PLPPR3Q6T4P5 718 aa22.48■■□□□ 1.19
ERGIC3-209ENST00000447986 TOP2BQ02880 1626 aa22.48■■□□□ 1.19
ERGIC3-209ENST00000447986 BIVM-ERCC5R4GMW8 1640 aa22.45■■□□□ 1.18
ERGIC3-209ENST00000447986 SYNJ1O43426 1573 aa22.45■■□□□ 1.18
ERGIC3-209ENST00000447986 TARBP1Q13395 1621 aaKnown RBP22.43■■□□□ 1.18
ERGIC3-209ENST00000447986 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
ERGIC3-209ENST00000447986 ZNF608Q9ULD9 1512 aaPredicted RBP22.39■■□□□ 1.17
ERGIC3-209ENST00000447986 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.17
ERGIC3-209ENST00000447986 WDR97A6NE52 1622 aa22.33■■□□□ 1.16
ERGIC3-209ENST00000447986 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
ERGIC3-209ENST00000447986 ABCA10Q8WWZ4 1543 aa22.32■■□□□ 1.16
ERGIC3-209ENST00000447986 AQRO60306 1485 aaKnown RBP eCLIP22.31■■□□□ 1.163e-8■■■■□ 19.7
ERGIC3-209ENST00000447986 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
ERGIC3-209ENST00000447986 GRIN2BQ13224 1484 aa22.21■■□□□ 1.15
ERGIC3-209ENST00000447986 TRIM41Q8WV44 630 aa22.2■■□□□ 1.15
ERGIC3-209ENST00000447986 ABCA5Q8WWZ7 1642 aa22.18■■□□□ 1.14
ERGIC3-209ENST00000447986 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
ERGIC3-209ENST00000447986 MAGI1Q96QZ7 1491 aaPredicted RBP22.12■■□□□ 1.13
ERGIC3-209ENST00000447986 PBRM1Q86U86 1689 aa22.12■■□□□ 1.13
ERGIC3-209ENST00000447986 KIF27Q86VH2 1401 aa22.11■■□□□ 1.13
ERGIC3-209ENST00000447986 FBLN2P98095 1184 aa22.08■■□□□ 1.13
ERGIC3-209ENST00000447986 OSCARQ8IYS5 282 aa22.07■■□□□ 1.12
ERGIC3-209ENST00000447986 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
ERGIC3-209ENST00000447986 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
ERGIC3-209ENST00000447986 SYNJ2O15056 1496 aa22.04■■□□□ 1.12
ERGIC3-209ENST00000447986 DNAJC5Q9H3Z4 198 aa22.02■■□□□ 1.12
ERGIC3-209ENST00000447986 CHD1O14646 1710 aa21.99■■□□□ 1.11
ERGIC3-209ENST00000447986 FHAD1B1AJZ9 1412 aa21.98■■□□□ 1.11
ERGIC3-209ENST00000447986 ADAMTS12P58397 1594 aa21.96■■□□□ 1.11
ERGIC3-209ENST00000447986 IGF1RP08069 1367 aa21.95■■□□□ 1.1
ERGIC3-209ENST00000447986 CUL7Q14999 1698 aa21.9■■□□□ 1.1
ERGIC3-209ENST00000447986 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
ERGIC3-209ENST00000447986 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
ERGIC3-209ENST00000447986 CARMIL1Q5VZK9 1371 aa21.85■■□□□ 1.09
ERGIC3-209ENST00000447986 EEA1Q15075 1411 aa21.83■■□□□ 1.08
ERGIC3-209ENST00000447986 NUP160Q12769 1436 aa21.78■■□□□ 1.08
ERGIC3-209ENST00000447986 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.07
ERGIC3-209ENST00000447986 CEP170Q5SW79 1584 aa21.75■■□□□ 1.07
ERGIC3-209ENST00000447986 CSRNP3Q8WYN3 585 aa21.75■■□□□ 1.07
ERGIC3-209ENST00000447986 RAPGEF2Q9Y4G8 1499 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms