RNA–Protein interactions for RNA: ENST00000319551.12

KRBA1-201, Transcript of KRAB-A domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene KRBA1, Length 4,020 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBA1-201ENST00000319551 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
KRBA1-201ENST00000319551 DCAF8L2P0C7V8 631 aa22.73■■□□□ 1.23
KRBA1-201ENST00000319551 SHROOM4Q9ULL8 1493 aa21.95■■□□□ 1.1
KRBA1-201ENST00000319551 SUPT5HO00267 1087 aaKnown RBP21.83■■□□□ 1.08
KRBA1-201ENST00000319551 EHMT2Q96KQ7 1210 aa21.08■□□□□ 0.96
KRBA1-201ENST00000319551 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
KRBA1-201ENST00000319551 TTBK1Q5TCY1 1321 aaPredicted RBP20.22■□□□□ 0.83
KRBA1-201ENST00000319551 PCGF6Q9BYE7 350 aa20.13■□□□□ 0.81
KRBA1-201ENST00000319551 RANGAP1P46060 587 aaPredicted RBP19.99■□□□□ 0.79
KRBA1-201ENST00000319551 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
KRBA1-201ENST00000319551 LOC105371045A0A1W2PR82 267 aa19.92■□□□□ 0.78
KRBA1-201ENST00000319551 PPARGC1BQ86YN6 1023 aaKnown RBP19.91■□□□□ 0.78
KRBA1-201ENST00000319551 ABCC9O60706 1549 aa19.84■□□□□ 0.77
KRBA1-201ENST00000319551 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.76
KRBA1-201ENST00000319551 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
KRBA1-201ENST00000319551 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
KRBA1-201ENST00000319551 APLP2Q06481 763 aa19.38■□□□□ 0.69
KRBA1-201ENST00000319551 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
KRBA1-201ENST00000319551 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
KRBA1-201ENST00000319551 CCER1Q8TC90 406 aaPredicted RBP19.23■□□□□ 0.67
KRBA1-201ENST00000319551 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
KRBA1-201ENST00000319551 TRIM26Q12899 539 aaPredicted RBP19.08■□□□□ 0.64
KRBA1-201ENST00000319551 HRCP23327 699 aa19.05■□□□□ 0.64
KRBA1-201ENST00000319551 ITGAEP38570 1179 aa19.01■□□□□ 0.63
KRBA1-201ENST00000319551 HNRNPUL2Q1KMD3 747 aaKnown RBP18.97■□□□□ 0.63
KRBA1-201ENST00000319551 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.96■□□□□ 0.63
KRBA1-201ENST00000319551 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
KRBA1-201ENST00000319551 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
KRBA1-201ENST00000319551 YTHDC1Q96MU7 727 aaKnown RBP18.82■□□□□ 0.6
KRBA1-201ENST00000319551 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
KRBA1-201ENST00000319551 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
KRBA1-201ENST00000319551 P3H3Q8IVL6 736 aa18.58■□□□□ 0.57
KRBA1-201ENST00000319551 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
KRBA1-201ENST00000319551 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
KRBA1-201ENST00000319551 ARID3CA6NKF2 412 aa18.51■□□□□ 0.55
KRBA1-201ENST00000319551 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
KRBA1-201ENST00000319551 FAM50AQ14320 339 aaKnown RBP18.4■□□□□ 0.54
KRBA1-201ENST00000319551 CENPBP07199 599 aaPredicted RBP18.33■□□□□ 0.53
KRBA1-201ENST00000319551 FBLN2P98095 1184 aa18.33■□□□□ 0.52
KRBA1-201ENST00000319551 NEUROD1Q13562 356 aa18.28■□□□□ 0.52
KRBA1-201ENST00000319551 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.51
KRBA1-201ENST00000319551 DIEXFQ68CQ4 756 aaKnown RBP18.27■□□□□ 0.51
KRBA1-201ENST00000319551 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
KRBA1-201ENST00000319551 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
KRBA1-201ENST00000319551 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
KRBA1-201ENST00000319551 NACADO15069 1562 aa18.17■□□□□ 0.5
KRBA1-201ENST00000319551 MYT1LQ9UL68 1186 aa18.12■□□□□ 0.49
KRBA1-201ENST00000319551 SOGA1O94964 1423 aa18.07■□□□□ 0.48
KRBA1-201ENST00000319551 TRIM52Q96A61 297 aa18.07■□□□□ 0.48
KRBA1-201ENST00000319551 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
KRBA1-201ENST00000319551 WIZO95785 1651 aa18■□□□□ 0.47
KRBA1-201ENST00000319551 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
KRBA1-201ENST00000319551 ZNF326Q5BKZ1 582 aaKnown RBP17.96■□□□□ 0.47
KRBA1-201ENST00000319551 CEP162Q5TB80 1403 aa17.96■□□□□ 0.47
KRBA1-201ENST00000319551 BAZ1BQ9UIG0 1483 aaKnown RBP17.96■□□□□ 0.47
KRBA1-201ENST00000319551 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
KRBA1-201ENST00000319551 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
KRBA1-201ENST00000319551 ZNF777Q9ULD5 760 aaPredicted RBP17.93■□□□□ 0.46
KRBA1-201ENST00000319551 CLIP1P30622 1438 aa17.92■□□□□ 0.46
KRBA1-201ENST00000319551 HIRIP3Q9BW71 556 aaPredicted RBP17.91■□□□□ 0.46
KRBA1-201ENST00000319551 CHIC2Q9UKJ5 165 aa17.91■□□□□ 0.46
KRBA1-201ENST00000319551 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
KRBA1-201ENST00000319551 ZNF316A6NFI3 1004 aaPredicted RBP17.9■□□□□ 0.46
KRBA1-201ENST00000319551 GTF3C3Q9Y5Q9 886 aa17.87■□□□□ 0.45
KRBA1-201ENST00000319551 BCANQ96GW7 911 aa17.82■□□□□ 0.44
KRBA1-201ENST00000319551 RUSC2Q8N2Y8 1516 aa17.79■□□□□ 0.44
KRBA1-201ENST00000319551 NEFLP07196 543 aa17.77■□□□□ 0.44
KRBA1-201ENST00000319551 GOLGA3Q08378 1498 aa17.73■□□□□ 0.43
KRBA1-201ENST00000319551 TNIKQ9UKE5 1360 aa17.7■□□□□ 0.42
KRBA1-201ENST00000319551 KANK4Q5T7N3 995 aaPredicted RBP17.69■□□□□ 0.42
KRBA1-201ENST00000319551 DDX10Q13206 875 aaKnown RBP17.68■□□□□ 0.42
KRBA1-201ENST00000319551 MIER1Q8N108 512 aa17.66■□□□□ 0.42
KRBA1-201ENST00000319551 RRP7BPQ9NSQ0 103 aa17.66■□□□□ 0.42
KRBA1-201ENST00000319551 SLC4A1APQ9BWU0 796 aaKnown RBP17.63■□□□□ 0.41
KRBA1-201ENST00000319551 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
KRBA1-201ENST00000319551 ACIN1Q9UKV3 1341 aaKnown RBP17.61■□□□□ 0.41
KRBA1-201ENST00000319551 CHMP7Q8WUX9 453 aaPredicted RBP17.59■□□□□ 0.41
KRBA1-201ENST00000319551 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
KRBA1-201ENST00000319551 SIN3AQ96ST3 1273 aa17.58■□□□□ 0.41
KRBA1-201ENST00000319551 MTUS2Q5JR59 1369 aa17.58■□□□□ 0.41
KRBA1-201ENST00000319551 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.4
KRBA1-201ENST00000319551 SENP3Q9H4L4 574 aaPredicted RBP17.57■□□□□ 0.4
KRBA1-201ENST00000319551 CUX2O14529 1486 aa17.57■□□□□ 0.4
KRBA1-201ENST00000319551 EEA1Q15075 1411 aa17.56■□□□□ 0.4
KRBA1-201ENST00000319551 TDRD9Q8NDG6 1382 aaKnown RBP17.54■□□□□ 0.4
KRBA1-201ENST00000319551 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
KRBA1-201ENST00000319551 TOP2AP11388 1531 aaKnown RBP17.53■□□□□ 0.4
KRBA1-201ENST00000319551 SMARCA4P51532 1647 aa17.52■□□□□ 0.4
KRBA1-201ENST00000319551 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.39
KRBA1-201ENST00000319551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.39
KRBA1-201ENST00000319551 ANP32CO43423 234 aa17.51■□□□□ 0.39
KRBA1-201ENST00000319551 CARMIL1Q5VZK9 1371 aa17.49■□□□□ 0.39
KRBA1-201ENST00000319551 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
KRBA1-201ENST00000319551 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
KRBA1-201ENST00000319551 TONSLQ96HA7 1378 aa17.47■□□□□ 0.39
KRBA1-201ENST00000319551 KDM2AQ9Y2K7 1162 aa17.46■□□□□ 0.39
KRBA1-201ENST00000319551 ERICH6Q7L0X2 663 aa17.45■□□□□ 0.38
KRBA1-201ENST00000319551 CDK11AQ9UQ88 783 aaPredicted RBP17.44■□□□□ 0.38
KRBA1-201ENST00000319551 SALL2Q9Y467 1007 aaPredicted RBP17.41■□□□□ 0.38
KRBA1-201ENST00000319551 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms