RNA–Protein interactions for RNA: ENST00000396563.8

SP140L-202, Transcript of SP140 nuclear body protein like, humanhuman

TSL 1 (best) BASIC

Gene SP140L, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140L-202ENST00000396563 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
SP140L-202ENST00000396563 SLC24A1O60721 1099 aa18.9■□□□□ 0.62
SP140L-202ENST00000396563 HRCP23327 699 aa17.98■□□□□ 0.47
SP140L-202ENST00000396563 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
SP140L-202ENST00000396563 DCAF1Q9Y4B6 1507 aa17.47■□□□□ 0.39
SP140L-202ENST00000396563 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
SP140L-202ENST00000396563 SHROOM4Q9ULL8 1493 aa17.43■□□□□ 0.38
SP140L-202ENST00000396563 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.38
SP140L-202ENST00000396563 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
SP140L-202ENST00000396563 ZCCHC6Q5VYS8 1495 aaKnown RBP17.38■□□□□ 0.37
SP140L-202ENST00000396563 PCGF6Q9BYE7 350 aa17.37■□□□□ 0.37
SP140L-202ENST00000396563 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
SP140L-202ENST00000396563 DAXXQ9UER7 740 aaPredicted RBP17.26■□□□□ 0.35
SP140L-202ENST00000396563 CCDC180Q9P1Z9 1646 aa17.26■□□□□ 0.35
SP140L-202ENST00000396563 ZEB1P37275 1124 aaPredicted RBP17.22■□□□□ 0.35
SP140L-202ENST00000396563 MYT1Q01538 1121 aa17.2■□□□□ 0.34
SP140L-202ENST00000396563 PPARGC1BQ86YN6 1023 aaKnown RBP17.17■□□□□ 0.34
SP140L-202ENST00000396563 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
SP140L-202ENST00000396563 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
SP140L-202ENST00000396563 RTN4Q9NQC3 1192 aaKnown RBP16.87■□□□□ 0.29
SP140L-202ENST00000396563 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
SP140L-202ENST00000396563 TTBK1Q5TCY1 1321 aaPredicted RBP16.84■□□□□ 0.29
SP140L-202ENST00000396563 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
SP140L-202ENST00000396563 LOC105371045A0A1W2PR82 267 aa16.72■□□□□ 0.27
SP140L-202ENST00000396563 APLP2Q06481 763 aa16.65■□□□□ 0.26
SP140L-202ENST00000396563 PRKCSHP14314 528 aaPredicted RBP16.65■□□□□ 0.26
SP140L-202ENST00000396563 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
SP140L-202ENST00000396563 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
SP140L-202ENST00000396563 ABCC9O60706 1549 aa16.53■□□□□ 0.24
SP140L-202ENST00000396563 ERICH6Q7L0X2 663 aa16.45■□□□□ 0.22
SP140L-202ENST00000396563 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.21
SP140L-202ENST00000396563 NEUROD1Q13562 356 aa16.36■□□□□ 0.21
SP140L-202ENST00000396563 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
SP140L-202ENST00000396563 DCAF8L2P0C7V8 631 aa16.34■□□□□ 0.21
SP140L-202ENST00000396563 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.21
SP140L-202ENST00000396563 GTF3C3Q9Y5Q9 886 aa16.31■□□□□ 0.2
SP140L-202ENST00000396563 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
SP140L-202ENST00000396563 DIEXFQ68CQ4 756 aaKnown RBP16.27■□□□□ 0.19
SP140L-202ENST00000396563 CCER1Q8TC90 406 aaPredicted RBP16.21■□□□□ 0.19
SP140L-202ENST00000396563 ARXQ96QS3 562 aa16.2■□□□□ 0.18
SP140L-202ENST00000396563 KCNA4P22459 653 aa16.17■□□□□ 0.18
SP140L-202ENST00000396563 WRNQ14191 1432 aaPredicted RBP eCLIP16.12■□□□□ 0.17
SP140L-202ENST00000396563 CLSPNQ9HAW4 1339 aa16.12■□□□□ 0.17
SP140L-202ENST00000396563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
SP140L-202ENST00000396563 TIMELESSQ9UNS1 1208 aa16.06■□□□□ 0.16
SP140L-202ENST00000396563 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
SP140L-202ENST00000396563 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
SP140L-202ENST00000396563 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
SP140L-202ENST00000396563 SCRIBQ14160 1630 aa15.93■□□□□ 0.14
SP140L-202ENST00000396563 EIF4G1Q04637 1599 aaKnown RBP15.88■□□□□ 0.13
SP140L-202ENST00000396563 EEA1Q15075 1411 aa15.86■□□□□ 0.13
SP140L-202ENST00000396563 TNIKQ9UKE5 1360 aa15.84■□□□□ 0.13
SP140L-202ENST00000396563 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
SP140L-202ENST00000396563 CEP162Q5TB80 1403 aa15.81■□□□□ 0.12
SP140L-202ENST00000396563 RANGAP1P46060 587 aaPredicted RBP15.79■□□□□ 0.12
SP140L-202ENST00000396563 TULP1O00294 542 aaPredicted RBP15.79■□□□□ 0.12
SP140L-202ENST00000396563 AEBP2Q6ZN18 517 aaPredicted RBP15.78■□□□□ 0.12
SP140L-202ENST00000396563 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
SP140L-202ENST00000396563 MIER1Q8N108 512 aa15.73■□□□□ 0.11
SP140L-202ENST00000396563 NACADO15069 1562 aa15.72■□□□□ 0.11
SP140L-202ENST00000396563 YTHDC1Q96MU7 727 aaKnown RBP15.71■□□□□ 0.11
SP140L-202ENST00000396563 TAOK2Q9UL54 1235 aa15.71■□□□□ 0.11
SP140L-202ENST00000396563 WIZO95785 1651 aa15.69■□□□□ 0.1
SP140L-202ENST00000396563 ANP32EQ9BTT0 268 aa15.68■□□□□ 0.1
SP140L-202ENST00000396563 HOMEZQ8IX15 550 aa15.67■□□□□ 0.1
SP140L-202ENST00000396563 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
SP140L-202ENST00000396563 EIF5BO60841 1220 aaKnown RBP15.65■□□□□ 0.1
SP140L-202ENST00000396563 GOLGA3Q08378 1498 aa15.64■□□□□ 0.09
SP140L-202ENST00000396563 KLHL34Q8N239 644 aa15.62■□□□□ 0.09
SP140L-202ENST00000396563 TOP2AP11388 1531 aaKnown RBP15.62■□□□□ 0.09
SP140L-202ENST00000396563 SUPT16HQ9Y5B9 1047 aaKnown RBP15.61■□□□□ 0.09
SP140L-202ENST00000396563 CCDC88BA6NC98 1476 aa15.57■□□□□ 0.08
SP140L-202ENST00000396563 BCL11AQ9H165 835 aa15.56■□□□□ 0.08
SP140L-202ENST00000396563 PHF23Q9BUL5 403 aaPredicted RBP15.55■□□□□ 0.08
SP140L-202ENST00000396563 KIF21BO75037 1637 aa15.53■□□□□ 0.08
SP140L-202ENST00000396563 TSHZ2Q9NRE2 1034 aa15.52■□□□□ 0.08
SP140L-202ENST00000396563 CEP164Q9UPV0 1460 aa15.5■□□□□ 0.07
SP140L-202ENST00000396563 ABCC8Q09428 1581 aa15.5■□□□□ 0.07
SP140L-202ENST00000396563 BAZ1BQ9UIG0 1483 aaKnown RBP15.48■□□□□ 0.07
SP140L-202ENST00000396563 SMARCA2P51531 1590 aa15.48■□□□□ 0.07
SP140L-202ENST00000396563 SOGA1O94964 1423 aa15.48■□□□□ 0.07
SP140L-202ENST00000396563 VPS8Q8N3P4 1428 aa15.48■□□□□ 0.07
SP140L-202ENST00000396563 UBTFP17480 764 aaKnown RBP15.46■□□□□ 0.06
SP140L-202ENST00000396563 TPRNQ4KMQ1 711 aa15.45■□□□□ 0.06
SP140L-202ENST00000396563 BCANQ96GW7 911 aa15.43■□□□□ 0.06
SP140L-202ENST00000396563 PODXL2Q9NZ53 605 aa15.43■□□□□ 0.06
SP140L-202ENST00000396563 CLIP1P30622 1438 aa15.4■□□□□ 0.06
SP140L-202ENST00000396563 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
SP140L-202ENST00000396563 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
SP140L-202ENST00000396563 DHX57Q6P158 1386 aaKnown RBP15.36■□□□□ 0.05
SP140L-202ENST00000396563 CUX2O14529 1486 aa15.33■□□□□ 0.04
SP140L-202ENST00000396563 RUSC2Q8N2Y8 1516 aa15.31■□□□□ 0.04
SP140L-202ENST00000396563 MYT1LQ9UL68 1186 aa15.29■□□□□ 0.04
SP140L-202ENST00000396563 RRBP1Q9P2E9 1410 aaKnown RBP15.24■□□□□ 0.03
SP140L-202ENST00000396563 NEFLP07196 543 aa15.24■□□□□ 0.03
SP140L-202ENST00000396563 ERICH3Q5RHP9 1530 aa15.2■□□□□ 0.02
SP140L-202ENST00000396563 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
SP140L-202ENST00000396563 RBM19Q9Y4C8 960 aaKnown RBP15.18■□□□□ 0.02
SP140L-202ENST00000396563 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
SP140L-202ENST00000396563 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms