RNA–Protein interactions for RNA: ENST00000433083.6

PHC1-201, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best) BASIC

Gene PHC1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-201ENST00000433083 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
PHC1-201ENST00000433083 NISCHQ9Y2I1 1504 aa19.95■□□□□ 0.78
PHC1-201ENST00000433083 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
PHC1-201ENST00000433083 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.56
PHC1-201ENST00000433083 EHMT2Q96KQ7 1210 aa17.83■□□□□ 0.45
PHC1-201ENST00000433083 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
PHC1-201ENST00000433083 APLP2Q06481 763 aa17.75■□□□□ 0.43
PHC1-201ENST00000433083 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
PHC1-201ENST00000433083 ABCC9O60706 1549 aa17.29■□□□□ 0.36
PHC1-201ENST00000433083 RANGAP1P46060 587 aaPredicted RBP17.27■□□□□ 0.36
PHC1-201ENST00000433083 PCGF6Q9BYE7 350 aa17.25■□□□□ 0.35
PHC1-201ENST00000433083 UBTFP17480 764 aaKnown RBP17.23■□□□□ 0.35
PHC1-201ENST00000433083 PELP1Q8IZL8 1130 aaKnown RBP17.22■□□□□ 0.35
PHC1-201ENST00000433083 ATP1B4Q9UN42 357 aaPredicted RBP17.2■□□□□ 0.34
PHC1-201ENST00000433083 TTBK1Q5TCY1 1321 aaPredicted RBP17.17■□□□□ 0.34
PHC1-201ENST00000433083 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
PHC1-201ENST00000433083 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
PHC1-201ENST00000433083 CENPBP07199 599 aaPredicted RBP16.9■□□□□ 0.3
PHC1-201ENST00000433083 MYT1Q01538 1121 aa16.82■□□□□ 0.28
PHC1-201ENST00000433083 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
PHC1-201ENST00000433083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
PHC1-201ENST00000433083 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
PHC1-201ENST00000433083 HRCP23327 699 aa16.75■□□□□ 0.27
PHC1-201ENST00000433083 CHIC1Q5VXU3 224 aa16.69■□□□□ 0.26
PHC1-201ENST00000433083 CCDC180Q9P1Z9 1646 aa16.66■□□□□ 0.26
PHC1-201ENST00000433083 MYT1LQ9UL68 1186 aa16.65■□□□□ 0.26
PHC1-201ENST00000433083 PPARGC1BQ86YN6 1023 aaKnown RBP16.57■□□□□ 0.24
PHC1-201ENST00000433083 TRIM26Q12899 539 aaPredicted RBP16.5■□□□□ 0.23
PHC1-201ENST00000433083 LOC105371045A0A1W2PR82 267 aa16.5■□□□□ 0.23
PHC1-201ENST00000433083 ZCCHC6Q5VYS8 1495 aaKnown RBP16.49■□□□□ 0.23
PHC1-201ENST00000433083 ERICH6Q7L0X2 663 aa16.49■□□□□ 0.23
PHC1-201ENST00000433083 ITGAEP38570 1179 aa16.48■□□□□ 0.23
PHC1-201ENST00000433083 SCRIBQ14160 1630 aa16.47■□□□□ 0.23
PHC1-201ENST00000433083 YTHDC1Q96MU7 727 aaKnown RBP16.44■□□□□ 0.22
PHC1-201ENST00000433083 FBLN2P98095 1184 aa16.39■□□□□ 0.21
PHC1-201ENST00000433083 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
PHC1-201ENST00000433083 NEFLP07196 543 aa16.26■□□□□ 0.19
PHC1-201ENST00000433083 FAM50AQ14320 339 aaKnown RBP16.22■□□□□ 0.19
PHC1-201ENST00000433083 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
PHC1-201ENST00000433083 NACADO15069 1562 aa16.17■□□□□ 0.18
PHC1-201ENST00000433083 POLR3GLQ9BT43 218 aa16.16■□□□□ 0.18
PHC1-201ENST00000433083 TRIM52Q96A61 297 aa16.1■□□□□ 0.17
PHC1-201ENST00000433083 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
PHC1-201ENST00000433083 P3H3Q8IVL6 736 aa16.04■□□□□ 0.16
PHC1-201ENST00000433083 DIEXFQ68CQ4 756 aaKnown RBP16■□□□□ 0.15
PHC1-201ENST00000433083 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
PHC1-201ENST00000433083 NPM1P06748 294 aaKnown RBP eCLIP15.95■□□□□ 0.14
PHC1-201ENST00000433083 ARID3CA6NKF2 412 aa15.95■□□□□ 0.14
PHC1-201ENST00000433083 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
PHC1-201ENST00000433083 ZNF777Q9ULD5 760 aaPredicted RBP15.87■□□□□ 0.13
PHC1-201ENST00000433083 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
PHC1-201ENST00000433083 CNGB1Q14028 1251 aaPredicted RBP15.87■□□□□ 0.13
PHC1-201ENST00000433083 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
PHC1-201ENST00000433083 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
PHC1-201ENST00000433083 BAZ1BQ9UIG0 1483 aaKnown RBP15.86■□□□□ 0.13
PHC1-201ENST00000433083 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
PHC1-201ENST00000433083 ESF1Q9H501 851 aaKnown RBP15.8■□□□□ 0.12
PHC1-201ENST00000433083 ZNF326Q5BKZ1 582 aaKnown RBP15.79■□□□□ 0.12
PHC1-201ENST00000433083 ACIN1Q9UKV3 1341 aaKnown RBP15.75■□□□□ 0.11
PHC1-201ENST00000433083 BCANQ96GW7 911 aa15.74■□□□□ 0.11
PHC1-201ENST00000433083 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
PHC1-201ENST00000433083 ERCC6Q03468 1493 aa15.67■□□□□ 0.1
PHC1-201ENST00000433083 EEA1Q15075 1411 aa15.67■□□□□ 0.1
PHC1-201ENST00000433083 WRNQ14191 1432 aaPredicted RBP eCLIP15.66■□□□□ 0.1
PHC1-201ENST00000433083 DAXXQ9UER7 740 aaPredicted RBP15.63■□□□□ 0.09
PHC1-201ENST00000433083 STAG3Q9UJ98 1225 aa15.61■□□□□ 0.09
PHC1-201ENST00000433083 TSPY4P0CV99 314 aa15.61■□□□□ 0.09
PHC1-201ENST00000433083 TSPY10P0CW01 314 aa15.61■□□□□ 0.09
PHC1-201ENST00000433083 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
PHC1-201ENST00000433083 MYO15BQ96JP2 1530 aa15.61■□□□□ 0.09
PHC1-201ENST00000433083 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
PHC1-201ENST00000433083 ANP32CO43423 234 aa15.59■□□□□ 0.09
PHC1-201ENST00000433083 ZNF316A6NFI3 1004 aaPredicted RBP15.59■□□□□ 0.09
PHC1-201ENST00000433083 RTL5Q5HYW3 569 aaPredicted RBP15.58■□□□□ 0.08
PHC1-201ENST00000433083 CLIP1P30622 1438 aa15.57■□□□□ 0.08
PHC1-201ENST00000433083 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
PHC1-201ENST00000433083 CHGAP10645 457 aaKnown RBP15.55■□□□□ 0.08
PHC1-201ENST00000433083 PLEKHD1A6NEE1 506 aa15.54■□□□□ 0.08
PHC1-201ENST00000433083 GOLGA3Q08378 1498 aa15.53■□□□□ 0.08
PHC1-201ENST00000433083 NEFMP07197 916 aa15.52■□□□□ 0.07
PHC1-201ENST00000433083 CHIC2Q9UKJ5 165 aa15.5■□□□□ 0.07
PHC1-201ENST00000433083 TONSLQ96HA7 1378 aa15.49■□□□□ 0.07
PHC1-201ENST00000433083 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
PHC1-201ENST00000433083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.07
PHC1-201ENST00000433083 KCNH8Q96L42 1107 aa15.48■□□□□ 0.07
PHC1-201ENST00000433083 PLPPR3Q6T4P5 718 aa15.47■□□□□ 0.07
PHC1-201ENST00000433083 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
PHC1-201ENST00000433083 PDS5BQ9NTI5 1447 aa15.44■□□□□ 0.06
PHC1-201ENST00000433083 CEP164Q9UPV0 1460 aa15.43■□□□□ 0.06
PHC1-201ENST00000433083 CLSPNQ9HAW4 1339 aa15.42■□□□□ 0.06
PHC1-201ENST00000433083 CEP162Q5TB80 1403 aa15.38■□□□□ 0.05
PHC1-201ENST00000433083 MROH2BQ7Z745 1585 aa15.37■□□□□ 0.05
PHC1-201ENST00000433083 SLC24A1O60721 1099 aa15.37■□□□□ 0.05
PHC1-201ENST00000433083 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
PHC1-201ENST00000433083 ZBTB47Q9UFB7 747 aaPredicted RBP15.35■□□□□ 0.05
PHC1-201ENST00000433083 CFDP1Q9UEE9 299 aaPredicted RBP15.35■□□□□ 0.05
PHC1-201ENST00000433083 CUX2O14529 1486 aa15.34■□□□□ 0.05
PHC1-201ENST00000433083 CARMIL1Q5VZK9 1371 aa15.34■□□□□ 0.05
PHC1-201ENST00000433083 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
PHC1-201ENST00000433083 RRP7BPQ9NSQ0 103 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms