RNA–Protein interactions for RNA: ENST00000587731.1

WIPI1-205, Transcript of WD repeat domain, phosphoinositide interacting 1, humanhuman

TSL 3

Gene WIPI1, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI1-205ENST00000587731 NISCHQ9Y2I1 1504 aa29.6■■■□□ 2.33
WIPI1-205ENST00000587731 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
WIPI1-205ENST00000587731 ZCCHC6Q5VYS8 1495 aaKnown RBP24.88■■□□□ 1.57
WIPI1-205ENST00000587731 DCAF1Q9Y4B6 1507 aa24.48■■□□□ 1.51
WIPI1-205ENST00000587731 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
WIPI1-205ENST00000587731 ABCC9O60706 1549 aa24.31■■□□□ 1.48
WIPI1-205ENST00000587731 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
WIPI1-205ENST00000587731 MYO15BQ96JP2 1530 aa24.16■■□□□ 1.46
WIPI1-205ENST00000587731 NACADO15069 1562 aa24.03■■□□□ 1.44
WIPI1-205ENST00000587731 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
WIPI1-205ENST00000587731 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
WIPI1-205ENST00000587731 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.33
WIPI1-205ENST00000587731 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
WIPI1-205ENST00000587731 BICRAQ9NZM4 1560 aa23.03■■□□□ 1.28
WIPI1-205ENST00000587731 RSF1Q96T23 1441 aaPredicted RBP22.97■■□□□ 1.27
WIPI1-205ENST00000587731 CECR2Q9BXF3 1484 aa22.96■■□□□ 1.27
WIPI1-205ENST00000587731 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
WIPI1-205ENST00000587731 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
WIPI1-205ENST00000587731 MROH2BQ7Z745 1585 aa22.86■■□□□ 1.25
WIPI1-205ENST00000587731 SMARCA4P51532 1647 aa22.76■■□□□ 1.23
WIPI1-205ENST00000587731 WIZO95785 1651 aa22.71■■□□□ 1.23
WIPI1-205ENST00000587731 TOP2AP11388 1531 aaKnown RBP22.49■■□□□ 1.19
WIPI1-205ENST00000587731 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
WIPI1-205ENST00000587731 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
WIPI1-205ENST00000587731 EIF4G1Q04637 1599 aaKnown RBP22.35■■□□□ 1.17
WIPI1-205ENST00000587731 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
WIPI1-205ENST00000587731 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
WIPI1-205ENST00000587731 BAZ1BQ9UIG0 1483 aaKnown RBP22.26■■□□□ 1.15
WIPI1-205ENST00000587731 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
WIPI1-205ENST00000587731 HMGXB3Q12766 1538 aa22.14■■□□□ 1.13
WIPI1-205ENST00000587731 NCAPD3P42695 1498 aa22.12■■□□□ 1.13
WIPI1-205ENST00000587731 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.11
WIPI1-205ENST00000587731 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
WIPI1-205ENST00000587731 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
WIPI1-205ENST00000587731 PRDM2Q13029 1718 aa21.66■■□□□ 1.06
WIPI1-205ENST00000587731 CFTRP13569 1480 aa21.65■■□□□ 1.06
WIPI1-205ENST00000587731 WRNQ14191 1432 aaPredicted RBP eCLIP21.65■■□□□ 1.06
WIPI1-205ENST00000587731 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
WIPI1-205ENST00000587731 SYNJ1O43426 1573 aa21.56■■□□□ 1.04
WIPI1-205ENST00000587731 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.04
WIPI1-205ENST00000587731 TOP2BQ02880 1626 aa21.48■■□□□ 1.03
WIPI1-205ENST00000587731 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
WIPI1-205ENST00000587731 LOC105371045A0A1W2PR82 267 aa21.46■■□□□ 1.03
WIPI1-205ENST00000587731 EEA1Q15075 1411 aa21.42■■□□□ 1.02
WIPI1-205ENST00000587731 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
WIPI1-205ENST00000587731 CUX1P39880 1505 aa21.39■■□□□ 1.01
WIPI1-205ENST00000587731 SOGA1O94964 1423 aa21.37■■□□□ 1.01
WIPI1-205ENST00000587731 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
WIPI1-205ENST00000587731 NESP48681 1621 aa21.35■■□□□ 1.01
WIPI1-205ENST00000587731 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
WIPI1-205ENST00000587731 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
WIPI1-205ENST00000587731 CSRNP3Q8WYN3 585 aa21.24■□□□□ 0.99
WIPI1-205ENST00000587731 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
WIPI1-205ENST00000587731 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
WIPI1-205ENST00000587731 EHMT2Q96KQ7 1210 aa21.21■□□□□ 0.99
WIPI1-205ENST00000587731 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
WIPI1-205ENST00000587731 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
WIPI1-205ENST00000587731 KIF21AQ7Z4S6 1674 aa21.15■□□□□ 0.98
WIPI1-205ENST00000587731 KIF21BO75037 1637 aa21.14■□□□□ 0.97
WIPI1-205ENST00000587731 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
WIPI1-205ENST00000587731 GOLGA3Q08378 1498 aa21.12■□□□□ 0.97
WIPI1-205ENST00000587731 KIF27Q86VH2 1401 aa21.11■□□□□ 0.97
WIPI1-205ENST00000587731 URB2Q14146 1524 aaKnown RBP21.07■□□□□ 0.96
WIPI1-205ENST00000587731 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
WIPI1-205ENST00000587731 CUX2O14529 1486 aa21.04■□□□□ 0.96
WIPI1-205ENST00000587731 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
WIPI1-205ENST00000587731 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
WIPI1-205ENST00000587731 MRC2Q9UBG0 1479 aa20.97■□□□□ 0.95
WIPI1-205ENST00000587731 ERICH3Q5RHP9 1530 aa20.97■□□□□ 0.95
WIPI1-205ENST00000587731 ABCA10Q8WWZ4 1543 aa20.96■□□□□ 0.95
WIPI1-205ENST00000587731 PRXQ9BXM0 1461 aa20.95■□□□□ 0.94
WIPI1-205ENST00000587731 CEP162Q5TB80 1403 aa20.95■□□□□ 0.94
WIPI1-205ENST00000587731 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
WIPI1-205ENST00000587731 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
WIPI1-205ENST00000587731 WDR97A6NE52 1622 aa20.92■□□□□ 0.94
WIPI1-205ENST00000587731 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
WIPI1-205ENST00000587731 IGF1RP08069 1367 aa20.86■□□□□ 0.93
WIPI1-205ENST00000587731 WDR62O43379 1518 aa20.83■□□□□ 0.93
WIPI1-205ENST00000587731 TARBP1Q13395 1621 aaKnown RBP20.81■□□□□ 0.92
WIPI1-205ENST00000587731 ABCA5Q8WWZ7 1642 aa20.8■□□□□ 0.92
WIPI1-205ENST00000587731 CARMIL1Q5VZK9 1371 aa20.79■□□□□ 0.92
WIPI1-205ENST00000587731 CUL7Q14999 1698 aa20.79■□□□□ 0.92
WIPI1-205ENST00000587731 CLIP1P30622 1438 aa20.77■□□□□ 0.91
WIPI1-205ENST00000587731 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
WIPI1-205ENST00000587731 GAPVD1Q14C86 1478 aa20.74■□□□□ 0.91
WIPI1-205ENST00000587731 TDRD9Q8NDG6 1382 aaKnown RBP20.73■□□□□ 0.91
WIPI1-205ENST00000587731 IFT140Q96RY7 1462 aa20.72■□□□□ 0.91
WIPI1-205ENST00000587731 PBRM1Q86U86 1689 aa20.67■□□□□ 0.9
WIPI1-205ENST00000587731 RANGAP1P46060 587 aaPredicted RBP20.63■□□□□ 0.89
WIPI1-205ENST00000587731 TRIM26Q12899 539 aaPredicted RBP20.6■□□□□ 0.89
WIPI1-205ENST00000587731 VPS8Q8N3P4 1428 aa20.6■□□□□ 0.89
WIPI1-205ENST00000587731 PCGF6Q9BYE7 350 aa20.59■□□□□ 0.89
WIPI1-205ENST00000587731 CTTNBP2Q8WZ74 1663 aa20.58■□□□□ 0.89
WIPI1-205ENST00000587731 AQRO60306 1485 aaKnown RBP eCLIP20.58■□□□□ 0.89
WIPI1-205ENST00000587731 GRIN2BQ13224 1484 aa20.58■□□□□ 0.89
WIPI1-205ENST00000587731 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
WIPI1-205ENST00000587731 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
WIPI1-205ENST00000587731 ARAP1Q96P48 1450 aa20.54■□□□□ 0.88
WIPI1-205ENST00000587731 EIF4G3O43432 1585 aaKnown RBP20.54■□□□□ 0.88
WIPI1-205ENST00000587731 FHAD1B1AJZ9 1412 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms